Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0236
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a pro... 97 7e-20
X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein. 97 7e-20
X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRN... 97 7e-20
M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein. 97 7e-20
BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a p... 97 7e-20
AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a p... 82 3e-15
AL158826-10|CAI12834.1| 151|Homo sapiens ribosomal protein L7a ... 73 1e-12
AB056665-1|BAB39381.1| 142|Homo sapiens ribosomal protein L7a p... 73 1e-12
Z83840-3|CAB46207.1| 128|Homo sapiens NHP2 non-histone chromoso... 38 0.032
D50420-1|BAA23363.1| 128|Homo sapiens OTK27 protein. 38 0.032
CR541725-1|CAG46526.1| 128|Homo sapiens NHP2L1 protein. 38 0.032
CR456531-1|CAG30417.1| 128|Homo sapiens NHP2L1 protein. 38 0.032
BC095439-1|AAH95439.1| 128|Homo sapiens NHP2 non-histone chromo... 38 0.032
BC019282-1|AAH19282.1| 128|Homo sapiens NHP2L1 protein protein. 38 0.032
BC005358-1|AAH05358.1| 128|Homo sapiens NHP2 non-histone chromo... 38 0.032
AF155235-1|AAF06959.1| 128|Homo sapiens 15.5 kD RNA binding pro... 38 0.032
AF091076-1|AAC72945.1| 128|Homo sapiens OTK27 protein. 38 0.032
X06704-1|CAA29888.1| 439|Homo sapiens protein ( Human mRNA for ... 31 6.4
CR457238-1|CAG33519.1| 153|Homo sapiens NOLA2 protein. 31 6.4
BC006387-1|AAH06387.1| 153|Homo sapiens nucleolar protein famil... 31 6.4
BC000009-1|AAH00009.1| 153|Homo sapiens nucleolar protein famil... 31 6.4
AK000486-1|BAA91198.1| 153|Homo sapiens protein ( Homo sapiens ... 31 6.4
AJ293309-1|CAC08452.1| 153|Homo sapiens NHP2 protein protein. 31 6.4
AF401219-1|AAL02175.1| 153|Homo sapiens small nucleolar RNA bin... 31 6.4
>X61923-1|CAA43925.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>X52138-1|CAA36383.1| 266|Homo sapiens L7a protein protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>X06705-1|CAA29889.1| 266|Homo sapiens protein ( Human PLA-X mRNA.
).
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>M36072-1|AAA60282.1| 266|Homo sapiens RPL7A protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC105290-1|AAI05291.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC073802-1|AAH73802.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC071901-1|AAH71901.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC071900-1|AAH71900.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC023624-1|AAH23624.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC023594-1|AAH23594.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC021979-1|AAH21979.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>BC005128-1|AAH05128.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>AL158826-8|CAI12832.1| 266|Homo sapiens ribosomal protein L7a
protein.
Length = 266
Score = 97.1 bits (231), Expect = 7e-20
Identities = 64/161 (39%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGPSISASSARRLYFSVV*KCPL---RSTNLPR 346
NPLFEKRPKNF IGQ IQP RDL+RF P +R K P + T
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALD 88
Query: 347 HWTRLQLRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPTPSDPAKHSHQA 526
T QL + +R + +R P
Sbjct: 89 RQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPT--KRPPVLRAGVNTVTTL 146
Query: 527 GREEEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 147 VENKKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 187
Score = 88.6 bits (210), Expect = 2e-17
Identities = 59/169 (34%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 420
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 51 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEK 110
Query: 421 XXXXXXXXXXXXXXXXXXXXXRPNTIRSG--KTQXXXXXXXXXXXXXXXXXXXXY*AGSL 594
RP +R+G L
Sbjct: 111 KQRLLARAEKKAAGKGDVPTKRPPVLRAGVNTVTTLVENKKAQLVVIAHDVDPIELVVFL 170
Query: 595 PASVMP*NGCTILHCQGASPASVALVHRKTCTCLALTNVESGDRGFLLR 741
PA G +G + LVHRKTCT +A T V S D+G L +
Sbjct: 171 PALCRK-MGVPYCIIKGKARLG-RLVHRKTCTTVAFTQVNSEDKGALAK 217
>AL158826-9|CAI12833.1| 191|Homo sapiens ribosomal protein L7a
protein.
Length = 191
Score = 81.8 bits (193), Expect = 3e-15
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +1
Query: 241 LVQI*RWPKYIRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 408
L + +WP+YIR+QRQ+A+L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 78 LTRFVKWPRYIRLQRQRAILYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPET 133
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +2
Query: 176 NPLFEKRPKNFAIGQGIQPTRDLSRFEDGP 265
NPLFEKRPKNF IGQ IQP RDL+RF P
Sbjct: 56 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWP 85
>AL158826-10|CAI12834.1| 151|Homo sapiens ribosomal protein L7a
protein.
Length = 151
Score = 72.9 bits (171), Expect = 1e-12
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +2
Query: 536 EEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 35 KKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 72
Score = 35.1 bits (77), Expect = 0.30
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 667 LVHRKTCTCLALTNVESGDRGFLLR 741
LVHRKTCT +A T V S D+G L +
Sbjct: 78 LVHRKTCTTVAFTQVNSEDKGALAK 102
>AB056665-1|BAB39381.1| 142|Homo sapiens ribosomal protein L7a
protein.
Length = 142
Score = 72.9 bits (171), Expect = 1e-12
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +2
Query: 536 EEGALVVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
++ LVVIAHDVDPIELV+FLPALCRKMGVPYCI+KG+
Sbjct: 26 KKAQLVVIAHDVDPIELVVFLPALCRKMGVPYCIIKGK 63
Score = 35.1 bits (77), Expect = 0.30
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +1
Query: 667 LVHRKTCTCLALTNVESGDRGFLLR 741
LVHRKTCT +A T V S D+G L +
Sbjct: 69 LVHRKTCTTVAFTQVNSEDKGALAK 93
>Z83840-3|CAB46207.1| 128|Homo sapiens NHP2 non-histone chromosome
protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>D50420-1|BAA23363.1| 128|Homo sapiens OTK27 protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>CR541725-1|CAG46526.1| 128|Homo sapiens NHP2L1 protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>CR456531-1|CAG30417.1| 128|Homo sapiens NHP2L1 protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>BC095439-1|AAH95439.1| 128|Homo sapiens NHP2 non-histone
chromosome protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>BC019282-1|AAH19282.1| 128|Homo sapiens NHP2L1 protein protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>BC005358-1|AAH05358.1| 128|Homo sapiens NHP2 non-histone
chromosome protein 2-like 1 (S. cerevisiae) protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>AF155235-1|AAF06959.1| 128|Homo sapiens 15.5 kD RNA binding
protein protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>AF091076-1|AAC72945.1| 128|Homo sapiens OTK27 protein.
Length = 128
Score = 38.3 bits (85), Expect = 0.032
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 551 VVIAHDVDPIELVLFLPALCRKMGVPYCIVKGQ 649
+V+A D +P+E++L LP LC VPY V+ +
Sbjct: 54 IVMAADAEPLEIILHLPLLCEDKNVPYVFVRSK 86
>X06704-1|CAA29888.1| 439|Homo sapiens protein ( Human mRNA for
trk-2h oncogene. ).
Length = 439
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2
Query: 176 NPLFEKRPKNFAI 214
NPLFEKRPKNF I
Sbjct: 29 NPLFEKRPKNFGI 41
>CR457238-1|CAG33519.1| 153|Homo sapiens NOLA2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 539 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 640
E ++V+A D PIE+ LP +C +PY +
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYI 108
>BC006387-1|AAH06387.1| 153|Homo sapiens nucleolar protein family
A, member 2 (H/ACA small nucleolar RNPs) protein.
Length = 153
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 539 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 640
E ++V+A D PIE+ LP +C +PY +
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYI 108
>BC000009-1|AAH00009.1| 153|Homo sapiens nucleolar protein family
A, member 2 (H/ACA small nucleolar RNPs) protein.
Length = 153
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 539 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 640
E ++V+A D PIE+ LP +C +PY +
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYI 108
>AK000486-1|BAA91198.1| 153|Homo sapiens protein ( Homo sapiens
cDNA FLJ20479 fis, clone KAT07382. ).
Length = 153
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 539 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 640
E ++V+A D PIE+ LP +C +PY +
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYI 108
>AJ293309-1|CAC08452.1| 153|Homo sapiens NHP2 protein protein.
Length = 153
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 539 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 640
E ++V+A D PIE+ LP +C +PY +
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYI 108
>AF401219-1|AAL02175.1| 153|Homo sapiens small nucleolar RNA
binding-like protein NHP2 protein.
Length = 153
Score = 30.7 bits (66), Expect = 6.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 539 EGALVVIAHDVDPIELVLFLPALCRKMGVPYCIV 640
E ++V+A D PIE+ LP +C +PY +
Sbjct: 75 EKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYI 108
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,904,343
Number of Sequences: 237096
Number of extensions: 2265005
Number of successful extensions: 10221
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 9765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10219
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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