Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0235
(803 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein. 120 6e-27
CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein. 120 6e-27
BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif prote... 120 6e-27
BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif prote... 120 6e-27
AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 120 6e-27
AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14... 120 6e-27
AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif prote... 120 6e-27
AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein. 120 6e-27
AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8 ... 120 6e-27
AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif prote... 117 4e-26
AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif prote... 117 4e-26
U96074-1|AAC78728.1| 320|Homo sapiens translation initiation fa... 46 2e-04
CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein. 46 2e-04
BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation ... 46 2e-04
BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation ... 46 2e-04
BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation ... 46 2e-04
AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation ... 46 2e-04
AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation ... 46 2e-04
AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation ... 46 2e-04
U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1 pr... 44 6e-04
CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein. 44 6e-04
BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein. 44 6e-04
BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein. 44 6e-04
BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein. 44 6e-04
BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding protein-in... 44 6e-04
AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repress... 44 6e-04
AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing... 44 6e-04
AF114818-1|AAF23589.1| 559|Homo sapiens Ro ribonucleoprotein-bi... 44 6e-04
U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein ... 44 9e-04
U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein ... 44 9e-04
U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein. 44 9e-04
M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2 ... 44 9e-04
M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein. 44 9e-04
D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein. 44 9e-04
D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein. 44 9e-04
BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isof... 44 9e-04
BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 44 9e-04
BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein. 44 9e-04
BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 44 9e-04
BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation fa... 44 9e-04
BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein. 44 9e-04
BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein. 44 9e-04
AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein. 44 9e-04
Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation fact... 43 0.001
Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation fact... 43 0.001
X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP cor... 43 0.001
M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation fact... 43 0.001
BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation fa... 43 0.001
BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage sti... 43 0.001
BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation fa... 43 0.001
U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein. 43 0.001
BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein. 43 0.001
AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,... 43 0.001
L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein. 42 0.002
L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein. 42 0.002
BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein pr... 42 0.002
BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif prote... 42 0.002
BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein. 42 0.002
AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif prote... 42 0.002
AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif prote... 42 0.002
X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1) ribonucleopro... 42 0.003
X06815-1|CAA29964.1| 216|Homo sapiens hU1-70K-like protein (216... 42 0.003
X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for ... 42 0.003
X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for ... 42 0.003
M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen... 42 0.003
M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen... 42 0.003
M57935-1|AAA36571.1| 166|Homo sapiens ribonucleoprotein antigen... 42 0.003
M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small ... 42 0.003
BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear r... 42 0.003
BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear ribonucle... 42 0.003
L26405-1|AAA58677.1| 359|Homo sapiens huc protein. 42 0.003
D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear rib... 42 0.003
D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear rib... 42 0.003
CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein. 42 0.003
BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear r... 42 0.003
BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear r... 42 0.003
BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear r... 42 0.003
AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation fa... 42 0.003
AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear r... 42 0.003
AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear r... 42 0.003
AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear r... 42 0.003
AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein. 42 0.003
M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein. 41 0.005
BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein. 41 0.005
BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear r... 41 0.005
AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear r... 41 0.005
AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein. 41 0.005
S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein. 41 0.006
BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif prote... 40 0.011
BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein. 40 0.011
BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif prote... 40 0.011
AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein. 40 0.011
AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein. 40 0.011
AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens ... 40 0.011
AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein. 40 0.011
AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2 pro... 40 0.011
Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation fact... 40 0.014
D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear rib... 40 0.014
BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein. 40 0.014
BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA bindi... 40 0.014
BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA bindi... 40 0.014
AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens ... 40 0.014
AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like f... 40 0.014
AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein BRU... 40 0.014
AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA bindi... 40 0.014
BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear r... 39 0.018
BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.018
BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.018
BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.018
BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear r... 39 0.018
AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear r... 39 0.018
AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens ... 39 0.018
CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein. 39 0.024
BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA bindi... 39 0.024
BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein. 39 0.024
BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein. 39 0.024
AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1... 39 0.024
AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1... 39 0.024
AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens ... 39 0.024
AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 b... 39 0.024
AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1 a... 39 0.024
AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like f... 39 0.024
AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein. 39 0.024
AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant pr... 39 0.024
AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA bindi... 39 0.024
BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein. 38 0.032
BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein. 38 0.032
BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif prote... 38 0.032
BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein. 38 0.032
BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein... 38 0.032
BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for IM... 38 0.032
BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein... 38 0.032
AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2... 38 0.032
AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38 p... 38 0.032
AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR prote... 38 0.032
AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR prote... 38 0.032
AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protei... 38 0.032
AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein... 38 0.032
AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein... 38 0.032
AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein... 38 0.032
AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein... 38 0.032
AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein... 38 0.032
AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein pr... 38 0.032
AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif prote... 38 0.032
AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein... 38 0.032
AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens ... 38 0.032
AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein. 38 0.032
AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein ... 38 0.032
AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein ... 38 0.032
AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein. 38 0.032
AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein ... 38 0.032
AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein ... 38 0.032
BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain) inte... 38 0.042
BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain) inte... 38 0.042
BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein. 38 0.042
BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein. 38 0.042
AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein. 38 0.042
AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotei... 38 0.042
AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein. 38 0.042
U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protei... 38 0.056
AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,... 38 0.056
AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,... 38 0.056
AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,... 38 0.056
U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous ribonucleop... 37 0.074
D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein. 37 0.074
CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein. 37 0.074
BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA bindi... 37 0.074
BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC017895-1|AAH17895.1| 109|Homo sapiens chromosome 14 open read... 37 0.074
BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear r... 37 0.074
AY860853-1|AAX58600.1| 109|Homo sapiens SRA stem-loop-interacti... 37 0.074
AJ272055-1|CAC81241.1| 109|Homo sapiens hypothetical protein pr... 37 0.074
AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CEL... 37 0.074
AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-bindin... 37 0.074
AF271779-1|AAG44790.1| 109|Homo sapiens DC50 protein. 37 0.074
AF253980-1|AAG44629.1| 109|Homo sapiens DC23 protein. 37 0.074
Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein. 37 0.098
X72990-1|CAA51489.1| 656|Homo sapiens EWS protein. 37 0.098
X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein. 37 0.098
X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for ... 37 0.098
U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein. 37 0.098
M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein. 37 0.098
D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear rib... 37 0.098
BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein. 37 0.098
BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein. 37 0.098
BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for IM... 37 0.098
BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repress... 37 0.098
BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein. 37 0.098
BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoin... 37 0.098
AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein. 37 0.098
AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein. 37 0.098
AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein. 37 0.098
AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein. 37 0.098
AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein. 37 0.098
AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein. 37 0.098
AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein. 37 0.098
AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,... 37 0.098
AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein. 37 0.098
AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein. 37 0.098
AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoin... 37 0.098
AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding, ... 37 0.098
AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 37 0.098
AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein. 37 0.098
AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein. 37 0.098
AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein. 37 0.098
AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear r... 37 0.098
AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding, ... 37 0.098
M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein. 36 0.13
D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein... 36 0.13
BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein. 36 0.13
AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7... 36 0.13
AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8 pr... 36 0.23
AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8 pr... 36 0.23
AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8 pr... 36 0.23
AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens ... 36 0.23
AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein. 36 0.23
AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8 pro... 36 0.23
CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein. 35 0.30
BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoin... 35 0.30
BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoin... 35 0.30
AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens ... 35 0.30
U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-4... 35 0.40
EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1 ... 35 0.40
EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein. 35 0.40
DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein. 35 0.40
CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein. 35 0.40
BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomeras... 35 0.40
BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein... 35 0.40
BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein. 35 0.40
BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomeras... 35 0.40
BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein. 35 0.40
AL109811-2|CAI22099.1| 295|Homo sapiens TAR DNA binding protein... 35 0.40
AL109811-1|CAI22098.1| 414|Homo sapiens TAR DNA binding protein... 35 0.40
AL049824-4|CAI19350.1| 301|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL049824-2|CAI19348.1| 296|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL049824-1|CAI19347.1| 314|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL035404-8|CAI19579.1| 301|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL035404-6|CAI19577.1| 296|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL035404-5|CAI19576.1| 314|Homo sapiens peptidylprolyl isomeras... 35 0.40
AL033527-11|CAI19410.1| 296|Homo sapiens peptidylprolyl isomera... 35 0.40
AL033527-10|CAI19409.1| 314|Homo sapiens peptidylprolyl isomera... 35 0.40
AK222754-1|BAD96474.1| 414|Homo sapiens TAR DNA binding protein... 35 0.40
AF104013-1|AAD19907.1| 296|Homo sapiens peptidyl-prolyl cis-tra... 35 0.40
AF104012-1|AAD19906.1| 301|Homo sapiens peptidyl-prolyl cis-tra... 35 0.40
AF042386-1|AAC00007.1| 296|Homo sapiens cyclophilin-33B protein. 35 0.40
AF042385-1|AAC00006.1| 301|Homo sapiens cyclophilin-33A protein. 35 0.40
BC052302-1|AAH52302.1| 257|Homo sapiens THO complex 4 protein. 34 0.52
BC033674-1|AAH33674.1| 283|Homo sapiens bol, boule-like (Drosop... 34 0.52
AM295005-1|CAL25726.1| 289|Homo sapiens boll protein protein. 34 0.52
AK093453-1|BAC04171.1| 339|Homo sapiens protein ( Homo sapiens ... 34 0.52
AK058099-1|BAB71664.1| 283|Homo sapiens protein ( Homo sapiens ... 34 0.52
AF272858-1|AAK58689.1| 283|Homo sapiens BOULE protein. 34 0.52
AF047002-1|AAD09608.1| 233|Homo sapiens transcriptional coactiv... 34 0.52
AC011997-1|AAX93045.1| 283|Homo sapiens unknown protein. 34 0.52
U76713-1|AAC50956.1| 331|Homo sapiens ABBP-1 protein. 34 0.69
M65028-1|AAA36575.1| 284|Homo sapiens hnRNP type A/B protein pr... 34 0.69
BC013889-1|AAH13889.1| 759|Homo sapiens RNA binding motif prote... 34 0.69
AL354775-1|CAI12730.1| 276|Homo sapiens protein ( Human DNA seq... 34 0.69
AK222716-1|BAD96436.1| 759|Homo sapiens RNA binding motif prote... 34 0.69
AK001239-1|BAA91575.1| 759|Homo sapiens protein ( Homo sapiens ... 34 0.69
BX537536-1|CAD97776.1| 492|Homo sapiens hypothetical protein pr... 33 0.91
BC107684-1|AAI07685.1| 387|Homo sapiens PPIL4 protein protein. 33 0.91
BC064134-1|AAH64134.1| 434|Homo sapiens PPIL4 protein protein. 33 0.91
BC020986-1|AAH20986.1| 492|Homo sapiens peptidylprolyl isomeras... 33 0.91
AL357619-2|CAI16471.1| 492|Homo sapiens peptidylprolyl isomeras... 33 0.91
AL078581-5|CAI19508.1| 492|Homo sapiens peptidylprolyl isomeras... 33 0.91
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 33 1.2
BC130001-1|AAI30002.1| 255|Homo sapiens LOC390748 protein protein. 33 1.2
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 33 1.2
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 33 1.2
BC004534-1|AAH04534.2| 634|Homo sapiens SFPQ protein protein. 33 1.2
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 33 1.2
Y11289-1|CAA72157.1| 471|Homo sapiens p54nrb protein. 33 1.6
X84157-1|CAA58962.1| 156|Homo sapiens subunit of the dimeric ca... 33 1.6
X64044-1|CAA45409.1| 475|Homo sapiens splicing factor U2AF prot... 33 1.6
U89867-1|AAC51852.1| 471|Homo sapiens nuclear matrix protein 55... 33 1.6
U63289-1|AAC50895.1| 482|Homo sapiens CUG-BP/hNab50 protein. 33 1.6
U02493-1|AAA03427.1| 471|Homo sapiens 54 kDa protein protein. 33 1.6
L14599-1|AAC37578.1| 471|Homo sapiens protein ( Human mRNA, com... 33 1.6
D59253-1|BAA09599.1| 156|Homo sapiens NCBP interacting protein ... 33 1.6
CR456761-1|CAG33042.1| 471|Homo sapiens NONO protein. 33 1.6
BX537372-1|CAD97614.1| 119|Homo sapiens hypothetical protein pr... 33 1.6
BT006842-1|AAP35488.1| 156|Homo sapiens nuclear cap binding pro... 33 1.6
BC104758-1|AAI04759.1| 465|Homo sapiens trinucleotide repeat co... 33 1.6
BC069639-1|AAH69639.1| 471|Homo sapiens non-POU domain containi... 33 1.6
BC069616-1|AAH69616.1| 471|Homo sapiens non-POU domain containi... 33 1.6
BC052491-1|AAH52491.1| 464|Homo sapiens trinucleotide repeat co... 33 1.6
BC031079-1|AAH31079.1| 483|Homo sapiens CUG triplet repeat, RNA... 33 1.6
BC030574-1|AAH30574.1| 471|Homo sapiens U2 small nuclear RNA au... 33 1.6
BC028299-1|AAH28299.1| 471|Homo sapiens non-POU domain containi... 33 1.6
BC012141-1|AAH12141.1| 471|Homo sapiens NONO protein protein. 33 1.6
BC008740-1|AAH08740.1| 471|Homo sapiens U2 small nuclear RNA au... 33 1.6
BC003129-1|AAH03129.1| 471|Homo sapiens NONO protein protein. 33 1.6
BC002364-1|AAH02364.1| 471|Homo sapiens non-POU domain containi... 33 1.6
BC001255-1|AAH01255.1| 156|Homo sapiens nuclear cap binding pro... 33 1.6
AY644767-1|AAV85455.1| 156|Homo sapiens cell proliferation-indu... 33 1.6
AY165003-1|AAN73884.1| 465|Homo sapiens CUG-BP and ETR-3 like f... 33 1.6
AL589765-4|CAI17167.1| 415|Homo sapiens trinucleotide repeat co... 33 1.6
AL589765-3|CAI17166.1| 465|Homo sapiens trinucleotide repeat co... 33 1.6
AJ007988-1|CAC20566.1| 486|Homo sapiens deadenylation factor CU... 33 1.6
AF329264-1|AAK07474.1| 462|Homo sapiens CUG-BP and ETR-3 like f... 33 1.6
AF267534-1|AAF78956.1| 483|Homo sapiens CUG-binding protein A i... 33 1.6
AF267533-1|AAF78955.1| 486|Homo sapiens CUG-binding protein LYL... 33 1.6
AF248648-1|AAF86230.1| 486|Homo sapiens RNA-binding protein BRU... 33 1.6
AB210019-1|BAE06101.1| 544|Homo sapiens CUGBP1 variant protein ... 33 1.6
U53209-1|AAC50658.1| 282|Homo sapiens transformer-2 alpha protein. 32 2.1
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 32 2.1
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 32 2.1
BC017094-1|AAH17094.1| 282|Homo sapiens transformer-2 alpha pro... 32 2.1
AC023105-1|AAQ96870.1| 282|Homo sapiens unknown protein. 32 2.1
AB209645-1|BAD92882.1| 1027|Homo sapiens alpha 1 type VII collag... 32 2.1
AB097048-1|BAC77401.1| 282|Homo sapiens putative MAPK activatin... 32 2.1
L41162-1|AAC41947.1| 684|Homo sapiens alpha-3 type IX collagen ... 32 2.8
L35013-1|AAA60300.1| 424|Homo sapiens spliceosomal protein prot... 32 2.8
DQ351905-1|ABC73063.1| 595|Homo sapiens heterogeneous nuclear r... 32 2.8
BX640912-1|CAE45953.1| 613|Homo sapiens hypothetical protein pr... 32 2.8
BC110389-1|AAI10390.1| 607|Homo sapiens HNRPR protein protein. 32 2.8
BC090883-1|AAH90883.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.8
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 32 2.8
BC013886-1|AAH13886.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.8
BC011705-1|AAH11705.1| 684|Homo sapiens collagen, type IX, alph... 32 2.8
BC007574-1|AAH07574.1| 561|Homo sapiens Unknown (protein for IM... 32 2.8
BC004273-1|AAH04273.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.8
BC001449-1|AAH01449.1| 636|Homo sapiens HNRPR protein protein. 32 2.8
AL591493-2|CAI12554.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.8
AL590487-2|CAI12648.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.8
AL109936-4|CAI19027.1| 636|Homo sapiens heterogeneous nuclear r... 32 2.8
AL109936-3|CAI19026.1| 633|Homo sapiens heterogeneous nuclear r... 32 2.8
AL035669-10|CAC12750.1| 684|Homo sapiens collagen type IX alpha... 32 2.8
AK223322-1|BAD97042.1| 424|Homo sapiens splicing factor 3b, sub... 32 2.8
AF026802-1|AAD47357.1| 684|Homo sapiens alpha-3 type IX collage... 32 2.8
AF000364-1|AAC39540.1| 633|Homo sapiens heterogeneous nuclear r... 32 2.8
AC112721-1|AAY24135.1| 2588|Homo sapiens unknown protein. 32 2.8
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 32 2.8
D78134-1|BAA11212.1| 172|Homo sapiens CIRP protein. 31 3.7
BT007210-1|AAP35874.1| 172|Homo sapiens cold inducible RNA bind... 31 3.7
BC074829-1|AAH74829.1| 455|Homo sapiens collagen-like tail subu... 31 3.7
BC074828-1|AAH74828.1| 455|Homo sapiens collagen-like tail subu... 31 3.7
BC040844-1|AAH40844.1| 410|Homo sapiens SYNCRIP protein protein. 31 3.7
BC036391-1|AAH36391.1| 521|Homo sapiens CUGBP2 protein protein. 31 3.7
BC000901-1|AAH00901.1| 172|Homo sapiens cold inducible RNA bind... 31 3.7
BC000403-1|AAH00403.1| 172|Homo sapiens cold inducible RNA bind... 31 3.7
AY150339-1|AAO06819.1| 456|Homo sapiens asymmetric acetylcholin... 31 3.7
AY150338-1|AAO06818.1| 456|Homo sapiens asymmetric acetylcholin... 31 3.7
AY150337-1|AAO06817.1| 456|Homo sapiens asymmetric acetylcholin... 31 3.7
AY150336-1|AAO06816.1| 456|Homo sapiens asymmetric acetylcholin... 31 3.7
AY150335-1|AAO06815.1| 210|Homo sapiens truncated asymmetric ac... 31 3.7
AY150334-1|AAO06814.1| 456|Homo sapiens asymmetric acetylcholin... 31 3.7
AL157704-2|CAH70230.1| 490|Homo sapiens CUG triplet repeat, RNA... 31 3.7
AL157704-1|CAH70231.1| 498|Homo sapiens CUG triplet repeat, RNA... 31 3.7
AL136320-2|CAI20169.1| 490|Homo sapiens CUG triplet repeat, RNA... 31 3.7
AL136320-1|CAI20168.1| 498|Homo sapiens CUG triplet repeat, RNA... 31 3.7
AK128423-1|BAC87434.1| 135|Homo sapiens protein ( Homo sapiens ... 31 3.7
AJ225895-1|CAA12648.1| 456|Homo sapiens acetylcholinesterase-as... 31 3.7
AF432906-1|AAL27627.1| 488|Homo sapiens neuroblastoma apoptosis... 31 3.7
AF295068-3|AAK72223.1| 484|Homo sapiens neuroplastoma apoptosis... 31 3.7
AF295068-2|AAK92699.1| 490|Homo sapiens neuroplastoma apoptosis... 31 3.7
AF295068-1|AAK72224.1| 509|Homo sapiens neuroplastoma apoptosis... 31 3.7
AF229126-6|AAF43196.1| 445|Homo sapiens acetylcholinesterase co... 31 3.7
AF229126-5|AAF43197.1| 421|Homo sapiens acetylcholinesterase co... 31 3.7
AF229126-4|AAF43198.1| 451|Homo sapiens acetylcholinesterase co... 31 3.7
AF229126-3|AAF43199.1| 446|Homo sapiens acetylcholinesterase co... 31 3.7
AF229126-2|AAF43195.1| 455|Homo sapiens acetylcholinesterase co... 31 3.7
AF229126-1|AAF43202.1| 329|Homo sapiens acetylcholinesterase co... 31 3.7
AF229124-1|AAF43201.1| 281|Homo sapiens acetylcholinesterase co... 31 3.7
AF229122-1|AAF43200.1| 291|Homo sapiens acetylcholinesterase co... 31 3.7
AF090693-1|AAD13760.1| 508|Homo sapiens apoptosis-related RNA b... 31 3.7
AF057036-1|AAC39927.1| 455|Homo sapiens acetylcholinesterase co... 31 3.7
AF036956-1|AAD02074.1| 490|Homo sapiens neuroblastoma apoptosis... 31 3.7
AF021336-1|AAC51787.1| 172|Homo sapiens DNA damage-inducible RN... 31 3.7
AC004258-1|AAC04895.1| 172|Homo sapiens CIRP protein. 31 3.7
X75314-1|CAA53063.1| 229|Homo sapiens SEB4D protein. 31 4.9
X16711-1|CAA34683.1| 1160|Homo sapiens COL2A1 protein. 31 4.9
X16468-1|CAA34488.1| 1418|Homo sapiens protein ( Human mRNA for ... 31 4.9
X13783-1|CAA32030.1| 714|Homo sapiens alpha-1 type 2 collagen (... 31 4.9
U28686-1|AAB17212.1| 157|Homo sapiens RNPL protein. 31 4.9
L10347-1|AAC41772.1| 1487|Homo sapiens alpha-1 type II collagen ... 31 4.9
BC116449-1|AAI16450.1| 1487|Homo sapiens collagen, type II, alph... 31 4.9
BC065509-1|AAH65509.1| 1019|Homo sapiens collagen, type VI, alph... 31 4.9
BC018711-1|AAH18711.1| 216|Homo sapiens RBM38 protein protein. 31 4.9
BC017770-1|AAH17770.1| 78|Homo sapiens RBM8A protein protein. 31 4.9
BC017560-1|AAH17560.1| 151|Homo sapiens MSI2 protein protein. 31 4.9
BC006825-1|AAH06825.1| 157|Homo sapiens RNA binding motif (RNP1... 31 4.9
BC001526-1|AAH01526.1| 328|Homo sapiens musashi homolog 2 (Dros... 31 4.9
AY547318-1|AAS55633.1| 236|Homo sapiens unknown protein. 31 4.9
AY029208-1|AAA52056.2| 1019|Homo sapiens type VI collagen alpha ... 31 4.9
AL136305-1|CAC36889.1| 236|Homo sapiens protein ( Human DNA seq... 31 4.9
AK095016-1|BAC04474.1| 211|Homo sapiens protein ( Homo sapiens ... 31 4.9
AK093888-1|BAC04244.1| 251|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF432218-1|AAL99924.1| 216|Homo sapiens CLL-associated antigen ... 31 4.9
S75462-1|AAB20836.1| 345|Homo sapiens collagen type VI alpha 2(... 31 6.4
U69546-1|AAB09040.1| 490|Homo sapiens RNA-binding protein BRUNO... 30 8.5
AF090694-1|AAD13761.1| 509|Homo sapiens apoptosis-related RNA b... 30 8.5
AC003982-3|AAB95636.1| 362|Homo sapiens WUGSC:H_166H1.2 protein. 30 8.5
AB073212-1|BAB70469.1| 179|Homo sapiens Musashi1 protein. 30 8.5
AB072592-1|BAB69769.1| 181|Homo sapiens Musashi1 protein. 30 8.5
AB072591-1|BAB69768.1| 181|Homo sapiens Musashi1 protein. 30 8.5
AB072590-1|BAB69767.1| 180|Homo sapiens Musashi1 protein. 30 8.5
AB012851-1|BAA33962.1| 362|Homo sapiens Musashi protein. 30 8.5
>CR541823-1|CAG46622.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 57.2 bits (132), Expect = 6e-08
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A + E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAVMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>CR541805-1|CAG46604.1| 174|Homo sapiens RBM8A protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>BC071577-1|AAH71577.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>BC017088-1|AAH17088.1| 174|Homo sapiens RNA binding motif protein
8A protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>AF403012-1|AAL26999.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>AF299118-1|AAG27091.1| 174|Homo sapiens RNA-binding protein Y14
protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>AF231512-1|AAG16782.1| 158|Homo sapiens RNA binding motif protein
8B protein.
Length = 158
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 21 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 78
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 79 EYGEIKNIHLNLDRRTGYLKGYTLVE 104
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 106 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 144
>AF182415-1|AAG14951.1| 158|Homo sapiens MDS014 protein.
Length = 158
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 21 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 78
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 79 EYGEIKNIHLNLDRRTGYLKGYTLVE 104
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 106 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 144
>AF127761-1|AAD21089.1| 174|Homo sapiens ribonucleoprotein RBM8
protein.
Length = 174
Score = 120 bits (289), Expect = 6e-27
Identities = 58/86 (67%), Positives = 68/86 (79%), Gaps = 4/86 (4%)
Frame = +3
Query: 261 GGGSAAERGNRGR----YDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G G +E G+R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+
Sbjct: 37 GRGFGSEEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFA 94
Query: 429 EFGEIKNIHLNLDRRTGFLKGYALVE 506
E+GEIKNIHLNLDRRTG+LKGY LVE
Sbjct: 95 EYGEIKNIHLNLDRRTGYLKGYTLVE 120
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 122 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 160
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>AF231511-1|AAG16781.1| 173|Homo sapiens RNA binding motif protein
8A protein.
Length = 173
Score = 117 bits (282), Expect = 4e-26
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 GGGSAAERGN-RGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFG 437
G GS R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+E+G
Sbjct: 39 GFGSEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYG 96
Query: 438 EIKNIHLNLDRRTGFLKGYALVE 506
EIKNIHLNLDRRTG+LKGY LVE
Sbjct: 97 EIKNIHLNLDRRTGYLKGYTLVE 119
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 121 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 159
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>AF198620-1|AAF37551.1| 173|Homo sapiens RNA binding motif protein
8 protein.
Length = 173
Score = 117 bits (282), Expect = 4e-26
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +3
Query: 261 GGGSAAERGN-RGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFG 437
G GS R R YDS+ +GD PGPQRSVEGWILFV+ VHEEA EEDI ++F+E+G
Sbjct: 39 GFGSEGSRARMREDYDSVEQDGDE--PGPQRSVEGWILFVTGVHEEATEEDIHDKFAEYG 96
Query: 438 EIKNIHLNLDRRTGFLKGYALVE 506
EIKNIHLNLDRRTG+LKGY LVE
Sbjct: 97 EIKNIHLNLDRRTGYLKGYTLVE 119
Score = 58.8 bits (136), Expect = 2e-08
Identities = 23/39 (58%), Positives = 31/39 (79%)
Frame = +2
Query: 509 ETYKQAASAREALDGADILGQAISVDWCFVKGPTKSHKK 625
ETYK+A +A E L+G D++GQ ISVDWCFV+GP K ++
Sbjct: 121 ETYKEAQAAMEGLNGQDLMGQPISVDWCFVRGPPKGKRR 159
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/28 (50%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +1
Query: 136 MADVLDIENS--EEFEVDEDGEQGIARL 213
MADVLD+ + E+F +DEDG++ I +L
Sbjct: 1 MADVLDLHEAGGEDFAMDEDGDESIHKL 28
>U96074-1|AAC78728.1| 320|Homo sapiens translation initiation
factor eIF3 p44 subunit protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>CR457134-1|CAG33415.1| 320|Homo sapiens EIF3S4 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>BT006889-1|AAP35535.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>BC008469-1|AAH08469.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>BC000733-1|AAH00733.1| 320|Homo sapiens eukaryotic translation
initiation factor 3, subunit 4 delta, 44kDa protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>AF094850-1|AAG15419.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>AF092453-1|AAG15396.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit p42/p44 protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>AF020833-1|AAB71866.1| 320|Homo sapiens eukaryotic translation
initiation factor 3 subunit protein.
Length = 320
Score = 45.6 bits (103), Expect = 2e-04
Identities = 23/67 (34%), Positives = 38/67 (56%)
Frame = +3
Query: 303 DSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGF 482
D + G+S P +R+ + + V+N+ E+ +E D+Q F FG I I+L D+ TG
Sbjct: 220 DGASRRGESMQPN-RRADDNATIRVTNLSEDTRETDLQELFRPFGSISRIYLAKDKTTGQ 278
Query: 483 LKGYALV 503
KG+A +
Sbjct: 279 SKGFAFI 285
>U51586-1|AAB41656.1| 541|Homo sapiens siah binding protein 1
protein.
Length = 541
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 210 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 255
>CR457143-1|CAG33424.1| 559|Homo sapiens SIAHBP1 protein.
Length = 559
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 273
>BC011979-1|AAH11979.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 230
>BC011265-1|AAH11265.1| 516|Homo sapiens SIAHBP1 protein protein.
Length = 516
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 185 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 230
>BC009734-1|AAH09734.1| 499|Homo sapiens SIAHBP1 protein protein.
Length = 499
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 168 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 213
>BC008875-1|AAH08875.1| 542|Homo sapiens fuse-binding
protein-interacting repressor protein.
Length = 542
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 256
>AF217197-1|AAF27522.2| 542|Homo sapiens FBP-interacting repressor
protein.
Length = 542
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 211 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 256
>AF190744-1|AAF05605.1| 556|Homo sapiens poly-U binding splicing
factor PUF60 protein.
Length = 556
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 225 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 270
>AF114818-1|AAF23589.1| 559|Homo sapiens Ro
ribonucleoprotein-binding protein 1 protein.
Length = 559
Score = 44.0 bits (99), Expect = 6e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
++V++VH++ ++DI++ F FG+IK+ L D TG KGY +E
Sbjct: 228 IYVASVHQDLSDDDIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIE 273
>U44799-1|AAA86655.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 98
>U44798-1|AAA86654.1| 246|Homo sapiens U1-snRNP binding protein
homolog protein.
Length = 246
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 98
>U09123-1|AAB60650.1| 341|Homo sapiens hnRNP protein A2 protein.
Length = 341
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+SG PG +V+ LFV + E+ +E +++ F E+G+I I + DR++G +G+ V
Sbjct: 89 ESGKPGAHVTVKK--LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 146
>M29065-1|AAA36574.1| 341|Homo sapiens protein ( Human hnRNP A2
protein mRNA. ).
Length = 341
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+SG PG +V+ LFV + E+ +E +++ F E+G+I I + DR++G +G+ V
Sbjct: 89 ESGKPGAHVTVKK--LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 146
>M29064-1|AAA60271.1| 353|Homo sapiens SNRPB1 protein.
Length = 353
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+SG PG +V+ LFV + E+ +E +++ F E+G+I I + DR++G +G+ V
Sbjct: 101 ESGKPGAHVTVKK--LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 158
>D28877-2|BAA06032.1| 341|Homo sapiens hnRNP A2 protein protein.
Length = 341
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+SG PG +V+ LFV + E+ +E +++ F E+G+I I + DR++G +G+ V
Sbjct: 89 ESGKPGAHVTVKK--LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 146
>D28877-1|BAA06031.1| 353|Homo sapiens hnRNP B1 protein protein.
Length = 353
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+SG PG +V+ LFV + E+ +E +++ F E+G+I I + DR++G +G+ V
Sbjct: 101 ESGKPGAHVTVKK--LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 158
>BC111955-1|AAI11956.1| 251|Homo sapiens U11/U12 snRNP 35K, isoform
b protein.
Length = 251
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 103
>BC093671-1|AAH93671.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 103
>BC054034-1|AAH54034.1| 246|Homo sapiens U11/U12 snRNP 35K protein.
Length = 246
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 53 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 98
>BC047678-1|AAH47678.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 103
>BC028239-1|AAH28239.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
protein.
Length = 616
Score = 43.6 bits (98), Expect = 9e-04
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAMDRSLRS--VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>BC009622-1|AAH09622.1| 251|Homo sapiens U11/U12 snRNP 35K protein.
Length = 251
Score = 43.6 bits (98), Expect = 9e-04
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ ++ + +E+ ++ FS +G+I+ + L D TGF KGYA +E
Sbjct: 58 LFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIE 103
>BC000506-1|AAH00506.3| 249|Homo sapiens HNRPA2B1 protein protein.
Length = 249
Score = 43.6 bits (98), Expect = 9e-04
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+SG PG +V+ LFV + E+ +E +++ F E+G+I I + DR++G +G+ V
Sbjct: 89 ESGKPGAHVTVKK--LFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFV 146
>AY130299-1|AAN05429.1| 616|Homo sapiens tCstF-64 protein.
Length = 616
Score = 43.6 bits (98), Expect = 9e-04
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAMDRSLRS--VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>Z95327-3|CAI42680.1| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAVDRSLRS--VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>Z83819-6|CAB06072.2| 577|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAVDRSLRS--VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>X06747-1|CAA29922.1| 320|Homo sapiens protein ( Human hnRNP core
protein A1. ).
Length = 320
Score = 43.2 bits (97), Expect = 0.001
Identities = 21/60 (35%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV + E+ +E +++ F +FG+I+ I + DR +G KG+A V
Sbjct: 94 DSQRPGAHLTVKK--IFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKKGFAFV 151
>M85085-1|AAA35724.1| 577|Homo sapiens cleavage stimulation factor
protein.
Length = 577
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAVDRSLRS--VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>BT009778-1|AAP88780.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAVDRSLRS--VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>BC033135-1|AAH33135.1| 559|Homo sapiens Similar to cleavage
stimulation factor, 3' pre-RNA, subunit 2, 64kD protein.
Length = 559
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 8 PAVDRSLRS--VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 65
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 66 QETALSAMRNLNGREFSGRALRVDNAAS 93
>BC017712-1|AAH17712.1| 577|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa protein.
Length = 577
Score = 43.2 bits (97), Expect = 0.001
Identities = 27/88 (30%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV N+ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAVDRSLRS--VFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>U29943-1|AAA70417.1| 346|Homo sapiens Hel-N2 protein.
Length = 346
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFG 437
G A++ R R+ + +G + G P GW +FV N+ +A E + F FG
Sbjct: 228 GPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG 287
Query: 438 EIKNIHLNLDRRTGFLKGYALV 503
+ N+ + D T KG+ V
Sbjct: 288 AVTNVKVIRDFNTNKCKGFGFV 309
>BC030692-1|AAH30692.1| 346|Homo sapiens ELAVL2 protein protein.
Length = 346
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFG 437
G A++ R R+ + +G + G P GW +FV N+ +A E + F FG
Sbjct: 228 GPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG 287
Query: 438 EIKNIHLNLDRRTGFLKGYALV 503
+ N+ + D T KG+ V
Sbjct: 288 AVTNVKVIRDFNTNKCKGFGFV 309
>AL161628-1|CAI13376.1| 346|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 346
Score = 42.7 bits (96), Expect = 0.001
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFG 437
G A++ R R+ + +G + G P GW +FV N+ +A E + F FG
Sbjct: 228 GPLAQQAQRFRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFG 287
Query: 438 EIKNIHLNLDRRTGFLKGYALV 503
+ N+ + D T KG+ V
Sbjct: 288 AVTNVKVIRDFNTNKCKGFGFV 309
>L10911-1|AAA16347.1| 530|Homo sapiens splicing factor protein.
Length = 530
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 227 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 280
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 281 LMMDSETGRSKGYGFI 296
>L10910-1|AAA16346.1| 524|Homo sapiens splicing factor protein.
Length = 524
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 227 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 280
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 281 LMMDSETGRSKGYGFI 296
>BX537770-1|CAD97833.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 70 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 123
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 124 LMMDSETGRSKGYGFI 139
>BC141835-1|AAI41836.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 227 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 280
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 281 LMMDSETGRSKGYGFI 296
>BC131543-1|AAI31544.1| 508|Homo sapiens RBM39 protein protein.
Length = 508
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 205 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 258
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 259 LMMDSETGRSKGYGFI 274
>AL357374-9|CAC11119.1| 524|Homo sapiens RNA binding motif protein
39 protein.
Length = 524
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 227 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 280
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 281 LMMDSETGRSKGYGFI 296
>AL357374-8|CAC11118.1| 530|Homo sapiens RNA binding motif protein
39 protein.
Length = 530
Score = 42.3 bits (95), Expect = 0.002
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G+ GP R L+V ++H E+ ++ F FG I++I
Sbjct: 227 ASQAEKNRAAAMANNLQKGSAGPMR------LYVGSLHFNITEDMLRGIFEPFGRIESIQ 280
Query: 456 LNLDRRTGFLKGYALV 503
L +D TG KGY +
Sbjct: 281 LMMDSETGRSKGYGFI 296
>X84841-1|CAA59278.1| 437|Homo sapiens 68 kDa (U1)
ribonucleoprotein protein.
Length = 437
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
>X06815-1|CAA29964.1| 216|Homo sapiens hU1-70K-like protein (216
AA) protein.
Length = 216
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 155 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 200
>X06812-1|CAA29961.1| 301|Homo sapiens protein ( Human mRNA for
hU1-70K snRNP protein (RNP8). ).
Length = 301
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 56 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 101
>X04654-1|CAA28352.1| 614|Homo sapiens protein ( Human mRNA for U1
RNA-associated 70K protein. ).
Length = 614
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 282 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 327
>M57939-2|AAA36573.1| 428|Homo sapiens ribonucleoprotein antigen
protein.
Length = 428
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
>M57939-1|AAA36572.1| 437|Homo sapiens ribonucleoprotein antigen
protein.
Length = 437
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
>M57935-1|AAA36571.1| 166|Homo sapiens ribonucleoprotein antigen
protein.
Length = 166
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
>M22636-1|AAA03001.1| 437|Homo sapiens protein ( Human U1 small
nuclear ribonucleoprotein 70 kd protein mRNA, complete
cds. ).
Length = 437
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
>BC071945-1|AAH71945.1| 320|Homo sapiens heterogeneous nuclear
ribonucleoprotein A1 protein.
Length = 320
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV + E+ +E +++ F +FG+I+ I + DR +G +G+A V
Sbjct: 94 DSQRPGAHLTVKK--IFVGGIKEDTEEHHLRDYFEQFGKIEVIEIMTDRGSGKKRGFAFV 151
>BC001315-1|AAH01315.1| 437|Homo sapiens small nuclear
ribonucleoprotein 70kDa polypeptide (RNP antigen)
protein.
Length = 437
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/46 (36%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV+ V+ + E ++ +F +G IK IH+ +R+G +GYA +E
Sbjct: 105 LFVARVNYDTTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIE 150
>L26405-1|AAA58677.1| 359|Homo sapiens huc protein.
Length = 359
Score = 41.5 bits (93), Expect = 0.003
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPGPQRS---VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLD 467
R+ +A +G SG G S GW +FV N+ EA E + F FG + N+ + D
Sbjct: 251 RFSPIAIDGMSGLAGVGLSGGAAGGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRD 310
Query: 468 RRTGFLKGYALV 503
T KG+ V
Sbjct: 311 FTTNKCKGFGFV 322
>D55674-1|BAA09525.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 355
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>D55672-1|BAA09523.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 306
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>CR457257-1|CAG33538.1| 423|Homo sapiens RNPC4 protein.
Length = 423
Score = 41.5 bits (93), Expect = 0.003
Identities = 25/76 (32%), Positives = 37/76 (48%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G GP R L+V ++H E+ ++ F FG+I NI
Sbjct: 224 ASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDMLRGIFEPFGKIDNIV 277
Query: 456 LNLDRRTGFLKGYALV 503
L D TG KGY L+
Sbjct: 278 LMKDSDTGRSKGYGLI 293
>BC026015-1|AAH26015.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>BC023977-1|AAH23977.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 306
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>BC002401-1|AAH02401.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (AU-rich element RNA binding protein
protein.
Length = 355
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>AK222574-1|BAD96294.1| 616|Homo sapiens cleavage stimulation
factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
variant protein.
Length = 616
Score = 41.5 bits (93), Expect = 0.003
Identities = 26/88 (29%), Positives = 45/88 (51%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RL 515
P RS+ +FV ++ EA EE +++ FSE G + + L DR TG KGY E +
Sbjct: 9 PAMDRSLRS--VFVGSIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQD 66
Query: 516 INKPLVHVKHWMAQIYSAKRYQLIGASS 599
L +++ + +S + ++ A+S
Sbjct: 67 QETALSAMRNLNGREFSGRALRVDNAAS 94
>AF039575-1|AAB96683.1| 298|Homo sapiens heterogeneous nuclear
ribonucleoprotein D0B protein.
Length = 298
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 50 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 107
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 108 YFSKFGEVVDCTLKLDPITGRSRGFGFV 135
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 176 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 220
>AF026126-2|AAC23475.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 306
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>AF026126-1|AAC23474.1| 355|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 355
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>AC124016-1|AAY40913.1| 355|Homo sapiens unknown protein.
Length = 355
Score = 41.5 bits (93), Expect = 0.003
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Frame = +3
Query: 264 GGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEEDIQN 419
GGSA G + D+ E D G P+ S E W +F+ + + ++D+++
Sbjct: 58 GGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKDLKD 115
Query: 420 QFSEFGEIKNIHLNLDRRTGFLKGYALV 503
FS+FGE+ + L LD TG +G+ V
Sbjct: 116 YFSKFGEVVDCTLKLDPITGRSRGFGFV 143
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 184 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 228
>M94630-1|AAA35781.1| 328|Homo sapiens DNA-binding protein protein.
Length = 328
Score = 41.1 bits (92), Expect = 0.005
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Frame = +3
Query: 255 EAGGGSAAERGNRGRYDSLAPEGDSG--TPGPQRSV------EGWILFVSNVHEEAQEED 410
EA GSA G + D+ E D G P+ S E W +F+ + + ++D
Sbjct: 34 EAPKGSAESEG--AKIDASKNEEDEGHSNSSPRHSEAATAQREEWKMFIGGLSWDTTKKD 91
Query: 411 IQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+++ FS+FGE+ + L LD TG +G+ V
Sbjct: 92 LKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 122
Score = 35.1 bits (77), Expect = 0.30
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G +
Sbjct: 163 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGLCFI 207
>BC113470-1|AAI13471.1| 378|Homo sapiens LOC653115 protein protein.
Length = 378
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV + E+ +E ++++ F ++G+I+ I + DR++G +G+A V
Sbjct: 115 DSVKPGAHLTVKK--IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
>BC112027-1|AAI12028.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV + E+ +E ++++ F ++G+I+ I + DR++G +G+A V
Sbjct: 115 DSVKPGAHLTVKK--IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
>AY363225-1|AAQ63629.1| 378|Homo sapiens heterogeneous nuclear
ribonucleoprotein A3 protein.
Length = 378
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV + E+ +E ++++ F ++G+I+ I + DR++G +G+A V
Sbjct: 115 DSVKPGAHLTVKK--IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
>AC079305-1|AAY14709.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 41.1 bits (92), Expect = 0.005
Identities = 19/60 (31%), Positives = 38/60 (63%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV + E+ +E ++++ F ++G+I+ I + DR++G +G+A V
Sbjct: 115 DSVKPGAHLTVKK--IFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFV 172
>S63912-1|AAB27595.1| 269|Homo sapiens FBRNP protein.
Length = 269
Score = 40.7 bits (91), Expect = 0.006
Identities = 19/60 (31%), Positives = 39/60 (65%)
Frame = +3
Query: 324 DSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
DS PG +V+ +FV ++ E+ +E ++++ F ++G+I+ I + DR++G +G+A V
Sbjct: 115 DSVKPGAHLTVKK--IFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASV 172
>BC024208-1|AAH24208.1| 423|Homo sapiens RNA binding motif protein
23 protein.
Length = 423
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G GP R L+V ++H E+ ++ F FG+I NI
Sbjct: 224 ASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDMLRGIFEPFGKIDNIV 277
Query: 456 LNLDRRTGFLKGYALV 503
L D TG KGY +
Sbjct: 278 LMKDSDTGRSKGYGFI 293
>BC014144-1|AAH14144.1| 367|Homo sapiens ELAVL3 protein protein.
Length = 367
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPGPQRSV----EGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
R+ +A +G SG G S GW +FV N+ EA E + F FG + N+ +
Sbjct: 258 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 317
Query: 465 DRRTGFLKGYALV 503
D T KG+ V
Sbjct: 318 DFTTNKCKGFGFV 330
>BC002566-1|AAH02566.1| 424|Homo sapiens RNA binding motif protein
23 protein.
Length = 424
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G GP R L+V ++H E+ ++ F FG+I NI
Sbjct: 224 ASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDMLRGIFEPFGKIDNIV 277
Query: 456 LNLDRRTGFLKGYALV 503
L D TG KGY +
Sbjct: 278 LMKDSDTGRSKGYGFI 293
>AY036909-1|AAK67714.1| 360|Homo sapiens HUC protein.
Length = 360
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPGPQRSV----EGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
R+ +A +G SG G S GW +FV N+ EA E + F FG + N+ +
Sbjct: 251 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 310
Query: 465 DRRTGFLKGYALV 503
D T KG+ V
Sbjct: 311 DFTTNKCKGFGFV 323
>AY034002-1|AAK57545.1| 318|Homo sapiens Hu antigen C long protein.
Length = 318
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPGPQRSV----EGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
R+ +A +G SG G S GW +FV N+ EA E + F FG + N+ +
Sbjct: 209 RFSPIAIDGMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 268
Query: 465 DRRTGFLKGYALV 503
D T KG+ V
Sbjct: 269 DFTTNKCKGFGFV 281
>AK001344-1|BAA91638.1| 406|Homo sapiens protein ( Homo sapiens
cDNA FLJ10482 fis, clone NT2RP2000153, weakly similar to
GAR2 PROTEIN. ).
Length = 406
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G GP R L+V ++H E+ ++ F FG+I NI
Sbjct: 206 ASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDMLRGIFEPFGKIDNIV 259
Query: 456 LNLDRRTGFLKGYALV 503
L D TG KGY +
Sbjct: 260 LMKDSDTGRSKGYGFI 275
>AF275678-1|AAG24388.1| 418|Homo sapiens PP239 protein protein.
Length = 418
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G GP R L+V ++H E+ ++ F FG+I NI
Sbjct: 218 ASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDMLRGIFEPFGKIDNIV 271
Query: 456 LNLDRRTGFLKGYALV 503
L D TG KGY +
Sbjct: 272 LMKDSDTGRSKGYGFI 287
>AF087905-1|AAP97203.1| 425|Homo sapiens splicing factor SF2
protein.
Length = 425
Score = 39.9 bits (89), Expect = 0.011
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +3
Query: 276 AERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIH 455
A + + R ++A G GP R L+V ++H E+ ++ F FG+I NI
Sbjct: 224 ASQAEKNRLAAMANNLQKGNGGPMR------LYVGSLHFNITEDMLRGIFEPFGKIDNIV 277
Query: 456 LNLDRRTGFLKGYALV 503
L D TG KGY +
Sbjct: 278 LMKDSDTGRSKGYGFI 293
>Z95327-4|CAI42681.1| 225|Homo sapiens cleavage stimulation factor,
3' pre-RNA, subunit 2, 64kDa protein.
Length = 225
Score = 39.5 bits (88), Expect = 0.014
Identities = 23/75 (30%), Positives = 39/75 (52%)
Frame = +3
Query: 375 VSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMA 554
V N+ EA EE +++ FSE G + + L DR TG KGY E + L +++
Sbjct: 11 VGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNG 70
Query: 555 QIYSAKRYQLIGASS 599
+ +S + ++ A+S
Sbjct: 71 REFSGRALRVDNAAS 85
>D55673-1|BAA09524.1| 215|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 215
Score = 39.5 bits (88), Expect = 0.014
Identities = 16/49 (32%), Positives = 30/49 (61%)
Frame = +3
Query: 357 EGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
E W +F+ + + ++D+++ FS+FGE+ + L LD TG +G+ V
Sbjct: 4 EEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFV 52
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 93 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 137
>BC045711-1|AAH45711.1| 448|Homo sapiens BRUNOL4 protein protein.
Length = 448
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 22 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIY 81
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 82 ELTVLKDRFTGMHKGCAFL 100
>BC004167-1|AAH04167.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 22 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIY 81
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 82 ELTVLKDRFTGMHKGCAFL 100
>BC001946-1|AAH01946.2| 484|Homo sapiens bruno-like 4, RNA binding
protein (Drosophila) protein.
Length = 484
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 22 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIY 81
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 82 ELTVLKDRFTGMHKGCAFL 100
>AK074596-1|BAC11082.1| 484|Homo sapiens protein ( Homo sapiens
cDNA FLJ90115 fis, clone HEMBA1006770, weakly similar to
FLOWERING TIME CONTROL PROTEIN FCA. ).
Length = 484
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 22 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGRIPRNLDEKDLKPLFEEFGKIY 81
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 82 ELTVLKDRFTGMHKGCAFL 100
>AF329265-1|AAK07475.1| 486|Homo sapiens CUG-BP and ETR-3 like
factor 4 protein.
Length = 486
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 22 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIY 81
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 82 ELTVLKDRFTGMHKGCAFL 100
>AF248650-1|AAF86232.1| 294|Homo sapiens RNA-binding protein
BRUNOL4 protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 22 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIY 81
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 82 ELTVLKDRFTGMHKGCAFL 100
>AB209774-1|BAD93011.1| 510|Homo sapiens bruno-like 4, RNA binding
protein variant protein.
Length = 510
Score = 39.5 bits (88), Expect = 0.014
Identities = 21/79 (26%), Positives = 38/79 (48%)
Frame = +3
Query: 267 GSAAERGNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIK 446
G + G+ G + L+ + + P + + LF+ + E+D++ F EFG+I
Sbjct: 47 GLGSSPGSAGHMNGLSHSPGNPSTIPMKDHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIY 106
Query: 447 NIHLNLDRRTGFLKGYALV 503
+ + DR TG KG A +
Sbjct: 107 ELTVLKDRFTGMHKGCAFL 125
>BC036708-1|AAH36708.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 332
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>BC009359-1|AAH09359.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>BC004561-1|AAH04561.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>BC002625-1|AAH02625.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>BC001616-1|AAH01616.1| 285|Homo sapiens heterogeneous nuclear
ribonucleoprotein A/B protein.
Length = 285
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>AK223425-1|BAD97145.1| 332|Homo sapiens heterogeneous nuclear
ribonucleoprotein AB isoform a variant protein.
Length = 332
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>AK097657-1|BAC05134.1| 332|Homo sapiens protein ( Homo sapiens
cDNA FLJ40338 fis, clone TESTI2032067, highly similar to
Rattus norvegicus mRNA for type A/B hnRNP protein p40.
).
Length = 332
Score = 39.1 bits (87), Expect = 0.018
Identities = 17/45 (37%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ EA EE I+ F EFGEI+ I L +D + +G+ +
Sbjct: 156 IFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFI 200
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/87 (22%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPEGDSGTPGPQRSV-----EGWILFVSNVHEEAQEEDIQNQ 422
AG G+ A G G + +G G Q + + +FV + + ++D+++
Sbjct: 30 AGAGTGAAAGAGGATAAPPSGNQNGAEGDQINASKNEEDAGKMFVGGLSWDTSKKDLKDY 89
Query: 423 FSEFGEIKNIHLNLDRRTGFLKGYALV 503
F++FGE+ + + +D TG +G+ +
Sbjct: 90 FTKFGEVVDCTIKMDPNTGRSRGFGFI 116
>CR457272-1|CAG33553.1| 357|Homo sapiens PSPC1 protein.
Length = 357
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 37 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 87
>BC028101-1|AAH28101.1| 485|Homo sapiens bruno-like 5, RNA binding
protein (Drosophila) protein.
Length = 485
Score = 38.7 bits (86), Expect = 0.024
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 306 SLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFL 485
S PE G P + ++ LFV + E+D++ F +FG I + + D TG
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 486 KGYALV 503
KG A +
Sbjct: 86 KGCAFL 91
>BC015944-1|AAH15944.1| 214|Homo sapiens TIA1 protein protein.
Length = 214
Score = 38.7 bits (86), Expect = 0.024
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
QRS + + +FV ++ E EDI+ F+ FG I + + D TG KGY V
Sbjct: 100 QRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 152
>BC014184-1|AAH14184.2| 393|Homo sapiens PSPC1 protein protein.
Length = 393
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 73 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 123
>AL354808-5|CAI41005.1| 248|Homo sapiens paraspeckle component 1
protein.
Length = 248
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 73 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 123
>AL354808-4|CAI41004.1| 523|Homo sapiens paraspeckle component 1
protein.
Length = 523
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 73 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 123
>AK001817-1|BAA91924.1| 357|Homo sapiens protein ( Homo sapiens
cDNA FLJ10955 fis, clone PLACE1000406, moderately
similar to PTB-ASSOCIATED SPLICING FACTOR. ).
Length = 357
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 37 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 87
>AF449627-1|AAL59602.1| 393|Homo sapiens paraspeckle protein 1 beta
isoform protein.
Length = 393
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 73 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 123
>AF448795-1|AAL59601.1| 523|Homo sapiens paraspeckle protein 1
alpha isoform protein.
Length = 523
Score = 38.7 bits (86), Expect = 0.024
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +3
Query: 336 PGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
PG + + LFV N+ + EED + F +GE + +N DR GF++
Sbjct: 73 PGEKTYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIR 123
>AF329266-1|AAK07476.1| 481|Homo sapiens CUG-BP and ETR-3 like
factor 5 protein.
Length = 481
Score = 38.7 bits (86), Expect = 0.024
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 306 SLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFL 485
S PE G P + ++ LFV + E+D++ F +FG I + + D TG
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 85
Query: 486 KGYALV 503
KG A +
Sbjct: 86 KGCAFL 91
>AC016700-3|AAX93193.1| 386|Homo sapiens unknown protein.
Length = 386
Score = 38.7 bits (86), Expect = 0.024
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
QRS + + +FV ++ E EDI+ F+ FG I + + D TG KGY V
Sbjct: 100 QRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 152
>AB209211-1|BAD92448.1| 464|Homo sapiens TIA1 protein variant
protein.
Length = 464
Score = 38.7 bits (86), Expect = 0.024
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
QRS + + +FV ++ E EDI+ F+ FG I + + D TG KGY V
Sbjct: 138 QRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFV 190
>AB209067-1|BAD92304.1| 421|Homo sapiens bruno-like 5, RNA binding
protein variant protein.
Length = 421
Score = 38.7 bits (86), Expect = 0.024
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 306 SLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFL 485
S PE G P + ++ LFV + E+D++ F +FG I + + D TG
Sbjct: 38 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMH 97
Query: 486 KGYALV 503
KG A +
Sbjct: 98 KGCAFL 103
>BC105582-1|AAI05583.1| 173|Homo sapiens RBMX2 protein protein.
Length = 173
Score = 38.3 bits (85), Expect = 0.032
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 363 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
WI F+ + E E DI FS++GEI NI+L D++TG KG+ +
Sbjct: 37 WI-FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>BC071575-1|AAH71575.1| 69|Homo sapiens FUSIP1 protein protein.
Length = 69
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>BC033750-1|AAH33750.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 38.3 bits (85), Expect = 0.032
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 363 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
WI F+ + E E DI FS++GEI NI+L D++TG KG+ +
Sbjct: 37 WI-FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>BC010074-1|AAH10074.1| 173|Homo sapiens FUSIP1 protein protein.
Length = 173
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>BC005039-1|AAH05039.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>BC003676-1|AAH03676.1| 163|Homo sapiens Unknown (protein for
IMAGE:3686686) protein.
Length = 163
Score = 38.3 bits (85), Expect = 0.032
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 363 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
WI F+ + E E DI FS++GEI NI+L D++TG KG+ +
Sbjct: 37 WI-FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>BC001107-1|AAH01107.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AY150181-1|AAN65381.1| 183|Homo sapiens splicing factor SRp38-2
protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AY150180-1|AAN65380.1| 262|Homo sapiens splicing factor SRp38
protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AY048592-2|AAL06099.1| 262|Homo sapiens TLS-associated SR protein
2 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AY048592-1|AAL06098.1| 183|Homo sapiens TLS-associated SR protein
1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL590609-10|CAI14808.1| 262|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL590609-9|CAI14807.1| 261|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 261
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL590609-8|CAI14805.1| 173|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 173
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL590609-7|CAI14806.1| 172|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 172
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL590609-6|CAI14803.1| 183|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL590609-5|CAI14804.1| 182|Homo sapiens FUS interacting protein
(serine/arginine-rich) 1 protein.
Length = 182
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AL050405-1|CAB43745.1| 322|Homo sapiens hypothetical protein
protein.
Length = 322
Score = 38.3 bits (85), Expect = 0.032
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 363 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
WI F+ + E E DI FS++GEI NI+L D++TG KG+ +
Sbjct: 37 WI-FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>AL035423-8|CAI42444.1| 322|Homo sapiens RNA binding motif protein,
X-linked 2 protein.
Length = 322
Score = 38.3 bits (85), Expect = 0.032
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 363 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
WI F+ + E E DI FS++GEI NI+L D++TG KG+ +
Sbjct: 37 WI-FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>AK222994-1|BAD96714.1| 262|Homo sapiens FUS interacting protein
(serine-arginine rich) 1 isoform 2 variant protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AK001286-1|BAA91601.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ10424 fis, clone NT2RP1000272, highly similar to
Homo sapiens TLS-associated protein TASR-2 mRNA. ).
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AF449427-1|AAL57514.1| 262|Homo sapiens SRrp40 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AF419332-1|AAL16666.1| 261|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 261
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AF419331-1|AAL16665.1| 183|Homo sapiens TLS-associated protein
TASR-1 protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AF151837-1|AAD34074.1| 351|Homo sapiens CGI-79 protein protein.
Length = 351
Score = 38.3 bits (85), Expect = 0.032
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 363 WILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
WI F+ + E E DI FS++GEI NI+L D++TG KG+ +
Sbjct: 37 WI-FLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCFL 82
>AF067730-1|AAC26727.1| 262|Homo sapiens TLS-associated protein
TASR-2 protein.
Length = 262
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>AF047448-1|AAC70918.1| 183|Homo sapiens TLS-associated protein
TASR protein.
Length = 183
Score = 38.3 bits (85), Expect = 0.032
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LFV NV ++ + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQ 57
>BC024238-1|AAH24238.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 37.9 bits (84), Expect = 0.042
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
Q + +++V ++ E I + FS+FG + L+ +RTG KGYA VE
Sbjct: 39 QEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVE 92
>BC022990-1|AAH22990.1| 293|Homo sapiens MKI67 (FHA domain)
interacting nucleolar phosphoprotein protein.
Length = 293
Score = 37.9 bits (84), Expect = 0.042
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
Q + +++V ++ E I + FS+FG + L+ +RTG KGYA VE
Sbjct: 39 QEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVE 92
>BC006137-1|AAH06137.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
LFV N+ + EED++ FS++G + +H +D T KG+A +
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFI 448
>BC004289-1|AAH04289.1| 960|Homo sapiens RBM19 protein protein.
Length = 960
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
LFV N+ + EED++ FS++G + +H +D T KG+A +
Sbjct: 404 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFI 448
>AC018737-1|AAY14830.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 37.9 bits (84), Expect = 0.042
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
Q + +++V ++ E I + FS+FG + L+ +RTG KGYA VE
Sbjct: 39 QEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVE 92
>AB044971-1|BAB41210.1| 293|Homo sapiens nucleolar phosphoprotein
Nopp34 protein.
Length = 293
Score = 37.9 bits (84), Expect = 0.042
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 345 QRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
Q + +++V ++ E I + FS+FG + L+ +RTG KGYA VE
Sbjct: 39 QEQLTPGVVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVE 92
>AB014582-1|BAA31657.2| 973|Homo sapiens KIAA0682 protein protein.
Length = 973
Score = 37.9 bits (84), Expect = 0.042
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
LFV N+ + EED++ FS++G + +H +D T KG+A +
Sbjct: 417 LFVRNLPYTSTEEDLEKLFSKYGPLSELHYPIDSLTKKPKGFAFI 461
>U12431-1|AAA69698.1| 359|Homo sapiens ELAV-like neuronal protein 1
protein.
Length = 359
Score = 37.5 bits (83), Expect = 0.056
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLD 467
R+ + +G + G P GW +FV N+ +A E + F FG + N+ + D
Sbjct: 251 RFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 310
Query: 468 RRTGFLKGYALV 503
T KG+ V
Sbjct: 311 FNTNKCKGFGFV 322
>AL161628-4|CAI13378.1| 387|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 387
Score = 37.5 bits (83), Expect = 0.056
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLD 467
R+ + +G + G P GW +FV N+ +A E + F FG + N+ + D
Sbjct: 279 RFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 338
Query: 468 RRTGFLKGYALV 503
T KG+ V
Sbjct: 339 FNTNKCKGFGFV 350
>AL161628-2|CAC22160.1| 359|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B)
protein.
Length = 359
Score = 37.5 bits (83), Expect = 0.056
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLD 467
R+ + +G + G P GW +FV N+ +A E + F FG + N+ + D
Sbjct: 251 RFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 310
Query: 468 RRTGFLKGYALV 503
T KG+ V
Sbjct: 311 FNTNKCKGFGFV 322
>AB209294-1|BAD92531.1| 367|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 2 (Hu antigen B) vari
protein.
Length = 367
Score = 37.5 bits (83), Expect = 0.056
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPG---PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLD 467
R+ + +G + G P GW +FV N+ +A E + F FG + N+ + D
Sbjct: 259 RFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRD 318
Query: 468 RRTGFLKGYALV 503
T KG+ V
Sbjct: 319 FNTNKCKGFGFV 330
>U23803-1|AAA65094.1| 305|Homo sapiens heterogeneous
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>D26158-1|BAA21838.1| 350|Homo sapiens PLE21 protein protein.
Length = 350
Score = 37.1 bits (82), Expect = 0.074
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +3
Query: 297 RYDSLAPEGDSGTPGPQRS---VEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLD 467
R+ +A +G SG G S GW +FV N+ E + + F FG + N+ + D
Sbjct: 242 RFSPIAIDGMSGLAGVGLSGGAAGGWCIFVYNLSPEPDQSVLWQLFGPFGAVTNVKVIRD 301
Query: 468 RRTGFLKGYALV 503
T KG+ +
Sbjct: 302 FTTNKCKGFGFM 313
>CR456986-1|CAG33267.1| 305|Homo sapiens HNRPA0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC030835-1|AAH30835.1| 481|Homo sapiens bruno-like 6, RNA binding
protein (Drosophila) protein.
Length = 481
Score = 37.1 bits (82), Expect = 0.074
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPE---GDSG-TPGP---QRSVEGWILFVSNVHEEAQEEDIQ 416
A GGSA G R + G SG PGP + + LFV + E+D++
Sbjct: 4 APGGSAQPAGPGPRLGFSTADSGVGMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLK 63
Query: 417 NQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
F EFG I + + DR TG KG A +
Sbjct: 64 PLFEEFGRIYELTVLKDRLTGLHKGCAFL 92
>BC030249-1|AAH30249.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC028976-1|AAH28976.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC019271-1|AAH19271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC018949-1|AAH18949.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC017895-1|AAH17895.1| 109|Homo sapiens chromosome 14 open reading
frame 156 protein.
Length = 109
Score = 37.1 bits (82), Expect = 0.074
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 309 LAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
+A G +RS+ + FV + A ++ F++FG ++ L D+ TGF +
Sbjct: 1 MAASAARGAAALRRSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHR 60
Query: 489 GYALVE 506
G V+
Sbjct: 61 GLGWVQ 66
>BC012980-1|AAH12980.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC011972-1|AAH11972.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC009284-1|AAH09284.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC007271-1|AAH07271.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>BC001008-1|AAH01008.1| 305|Homo sapiens heterogeneous nuclear
ribonucleoprotein A0 protein.
Length = 305
Score = 37.1 bits (82), Expect = 0.074
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNL 464
GN DS PG V+ LFV + + E D+ FS+FG ++ +
Sbjct: 74 GNTVELKRAVSREDSARPGAHAKVKK--LFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIA 131
Query: 465 DRRTGFLKGYALV 503
D+++G +G+ V
Sbjct: 132 DKQSGKKRGFGFV 144
>AY860853-1|AAX58600.1| 109|Homo sapiens SRA stem-loop-interacting
RNA-binding protein protein.
Length = 109
Score = 37.1 bits (82), Expect = 0.074
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 309 LAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
+A G +RS+ + FV + A ++ F++FG ++ L D+ TGF +
Sbjct: 1 MAASAARGAAALRRSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHR 60
Query: 489 GYALVE 506
G V+
Sbjct: 61 GLGWVQ 66
>AJ272055-1|CAC81241.1| 109|Homo sapiens hypothetical protein
protein.
Length = 109
Score = 37.1 bits (82), Expect = 0.074
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 309 LAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
+A G +RS+ + FV + A ++ F++FG ++ L D+ TGF +
Sbjct: 1 MAASAARGAAALRRSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHR 60
Query: 489 GYALVE 506
G V+
Sbjct: 61 GLGWVQ 66
>AF425606-1|AAL34513.1| 481|Homo sapiens RNA-binding protein CELF6
protein.
Length = 481
Score = 37.1 bits (82), Expect = 0.074
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPE---GDSG-TPGP---QRSVEGWILFVSNVHEEAQEEDIQ 416
A GGSA G R + G SG PGP + + LFV + E+D++
Sbjct: 4 APGGSAQPAGPGPRLGFSTADSGVGMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLK 63
Query: 417 NQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
F EFG I + + DR TG KG A +
Sbjct: 64 PLFEEFGRIYELTVLKDRLTGLHKGCAFL 92
>AF401233-1|AAK95615.1| 481|Homo sapiens BRUNO-like 6 RNA-binding
protein protein.
Length = 481
Score = 37.1 bits (82), Expect = 0.074
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Frame = +3
Query: 258 AGGGSAAERGNRGRYDSLAPE---GDSG-TPGP---QRSVEGWILFVSNVHEEAQEEDIQ 416
A GGSA G R + G SG PGP + + LFV + E+D++
Sbjct: 4 APGGSAQPAGPGPRLGFSTADSGVGMSGLNPGPAVPMKDHDAIKLFVGQIPRGLDEQDLK 63
Query: 417 NQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
F EFG I + + DR TG KG A +
Sbjct: 64 PLFEEFGRIYELTVLKDRLTGLHKGCAFL 92
>AF271779-1|AAG44790.1| 109|Homo sapiens DC50 protein.
Length = 109
Score = 37.1 bits (82), Expect = 0.074
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 309 LAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
+A G +RS+ + FV + A ++ F++FG ++ L D+ TGF +
Sbjct: 1 MAASAARGAAALRRSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHR 60
Query: 489 GYALVE 506
G V+
Sbjct: 61 GLGWVQ 66
>AF253980-1|AAG44629.1| 109|Homo sapiens DC23 protein.
Length = 109
Score = 37.1 bits (82), Expect = 0.074
Identities = 17/66 (25%), Positives = 31/66 (46%)
Frame = +3
Query: 309 LAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLK 488
+A G +RS+ + FV + A ++ F++FG ++ L D+ TGF +
Sbjct: 1 MAASAARGAAALRRSINQPVAFVRRIPWTAASSQLKEHFAQFGHVRRCILPFDKETGFHR 60
Query: 489 GYALVE 506
G V+
Sbjct: 61 GLGWVQ 66
>Y07848-1|CAA69177.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.098
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G GSA ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 323 GMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 382
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 383 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 442
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 443 SLARKKPPMNSMR 455
>X72990-1|CAA51489.1| 656|Homo sapiens EWS protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.098
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G GSA ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 323 GMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 382
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 383 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 442
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 443 SLARKKPPMNSMR 455
>X66899-1|CAA47350.1| 656|Homo sapiens RNA binding protein protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.098
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G GSA ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 323 GMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 382
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 383 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 442
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 443 SLARKKPPMNSMR 455
>X03910-1|CAA27544.1| 225|Homo sapiens protein ( Human mRNA for
hnRNP C protein cross-reacting with C1 and C2 hnRNP
core proteins. ).
Length = 225
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 174 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 218
>U02019-1|AAC50056.1| 286|Homo sapiens p37 AUF1 protein.
Length = 286
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 163 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 207
>M62843-1|AAA58396.1| 380|Homo sapiens brain protein protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 290 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 343
>D55671-1|BAA09522.1| 267|Homo sapiens heterogeneous nuclear
ribonucleoprotein D (hnRNP D) protein.
Length = 267
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 96 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 140
>BC036071-1|AAH36071.1| 366|Homo sapiens ELAVL4 protein protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>BC032643-1|AAH32643.1| 527|Homo sapiens SYNCRIP protein protein.
Length = 527
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
>BC024283-1|AAH24283.1| 453|Homo sapiens Unknown (protein for
IMAGE:4079825) protein.
Length = 453
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 183 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 241
Query: 495 ALV 503
A V
Sbjct: 242 AFV 244
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 351 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 403
>BC021715-1|AAH21715.1| 261|Homo sapiens serine-arginine repressor
protein (35 kDa) protein.
Length = 261
Score = 36.7 bits (81), Expect = 0.098
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LF+ NV + + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>BC015575-1|AAH15575.1| 417|Homo sapiens SYNCRIP protein protein.
Length = 417
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>BC004817-1|AAH04817.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.098
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G GSA ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 323 GMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 382
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 383 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 442
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 443 SLARKKPPMNSMR 455
>AY034483-1|AAK59705.1| 561|Homo sapiens hnRNP Q1 protein.
Length = 561
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AY034482-1|AAK59704.1| 588|Homo sapiens hnRNP Q2 protein.
Length = 588
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
>AY034481-1|AAK59703.1| 623|Homo sapiens hnRNP Q3 protein.
Length = 623
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AY033998-1|AAK57541.1| 380|Homo sapiens HUDPRO1 protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 290 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 343
>AY033997-1|AAK57540.1| 366|Homo sapiens HUD1 protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>AY033996-1|AAK57539.1| 383|Homo sapiens HUD4 protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 293 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 346
>AY033995-1|AAK57538.1| 366|Homo sapiens HUD3 protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>AL592182-6|CAI15792.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 295 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 348
>AL592182-5|CAI15793.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 281 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 334
>AL592182-4|CAI15791.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 290 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 343
>AL592182-3|CAI15790.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>AL592182-2|CAI15789.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 293 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 346
>AL592182-1|CAI15788.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>AL583843-6|CAI14638.1| 385|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 385
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 295 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 348
>AL583843-5|CAI14639.1| 371|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 371
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 281 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 334
>AL583843-4|CAI14637.1| 380|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 380
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 290 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 343
>AL583843-3|CAI14636.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>AL583843-2|CAI14635.1| 383|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 383
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 293 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 346
>AL583843-1|CAI14634.1| 366|Homo sapiens ELAV (embryonic lethal,
abnormal vision, Drosophila)-like 4 (Hu antigen D)
protein.
Length = 366
Score = 36.7 bits (81), Expect = 0.098
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 342 PQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
P + GW +FV N+ ++ E + F FG + N+ + D T KG+ V
Sbjct: 276 PGHTGTGWCIFVYNLSPDSDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFV 329
>AL136082-4|CAI20447.1| 623|Homo sapiens RP1-3J17.2 protein.
Length = 623
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AL136082-3|CAI20446.1| 562|Homo sapiens RP1-3J17.2 protein.
Length = 562
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AL031186-2|CAI18001.1| 656|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.098
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G GSA ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 323 GMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 382
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 383 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 442
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 443 SLARKKPPMNSMR 455
>AK222776-1|BAD96496.1| 623|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 623
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 600
Score = 36.7 bits (81), Expect = 0.098
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
G GSA ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 267 GMGSAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 326
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 327 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 386
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 387 SLARKKPPMNSMR 399
>AF449428-1|AAL57515.1| 261|Homo sapiens SRrp35 protein.
Length = 261
Score = 36.7 bits (81), Expect = 0.098
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
LF+ NV + + ED++ +F +G I ++++ LD T +G+A V+
Sbjct: 12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQ 57
>AF155568-1|AAD38198.1| 562|Homo sapiens NSAP1 protein protein.
Length = 562
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AF037448-1|AAC12926.1| 623|Homo sapiens Gry-rbp protein.
Length = 623
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 147 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 205
Query: 495 ALV 503
A V
Sbjct: 206 AFV 208
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 315 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 367
>AF026126-3|AAC23476.1| 336|Homo sapiens heterogeneous nuclear
ribonucleoprotein D protein.
Length = 336
Score = 36.7 bits (81), Expect = 0.098
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV + + EE I+ F FGE+++I L +D +T +G+ +
Sbjct: 165 IFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFI 209
>AB209098-1|BAD92335.1| 534|Homo sapiens synaptotagmin binding,
cytoplasmic RNA interacting protein variant protein.
Length = 534
Score = 36.7 bits (81), Expect = 0.098
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +3
Query: 315 PEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY 494
P DS G Q SV G +FV + + E+++ F + G I ++ L +D TG +GY
Sbjct: 119 PPPDSVYSGQQPSV-GTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGY 177
Query: 495 ALV 503
A V
Sbjct: 178 AFV 180
Score = 31.5 bits (68), Expect = 3.7
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +3
Query: 285 GNRGRYDSLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNI 452
GN G + P D P P+ + +LFV N+ EE ++ FS+FG+++ +
Sbjct: 287 GNVGTVEWADPIED---PDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV 339
>M96954-1|AAA36384.1| 375|Homo sapiens nucleolysin TIAR protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ E EDI++ F+ FG+I + + D TG KGY V
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
>D64015-1|BAA21559.1| 265|Homo sapiens T-cluster binding protein
protein.
Length = 265
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ E EDI++ F+ FG+I + + D TG KGY V
Sbjct: 60 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 104
>BC047522-1|AAH47522.1| 402|Homo sapiens BRUNOL5 protein protein.
Length = 402
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +3
Query: 306 SLAPEGDSGTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFL 485
S PE G P + ++ LFV + E+D++ +FG I + + D TG
Sbjct: 26 SSGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLLEQFGRIYELTVLKDPYTGMH 85
Query: 486 KGYALV 503
KG A +
Sbjct: 86 KGCAFL 91
>AY633610-1|AAV33303.1| 374|Homo sapiens aging-associated gene 7
protein protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.13
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
+FV ++ E EDI++ F+ FG+I + + D TG KGY V
Sbjct: 99 VFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 143
>AL136097-15|CAI16208.1| 227|Homo sapiens nucleolar protein 8
protein.
Length = 227
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 458
L+V + ++ E D+QNQFS FGE+ ++ +
Sbjct: 10 LYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AL136097-14|CAI16209.1| 205|Homo sapiens nucleolar protein 8
protein.
Length = 205
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 458
L+V + ++ E D+QNQFS FGE+ ++ +
Sbjct: 10 LYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AL136097-13|CAC12712.1| 427|Homo sapiens nucleolar protein 8
protein.
Length = 427
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 458
L+V + ++ E D+QNQFS FGE+ ++ +
Sbjct: 10 LYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AK001049-1|BAA91479.1| 427|Homo sapiens protein ( Homo sapiens
cDNA FLJ10187 fis, clone HEMBA1004596. ).
Length = 427
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 458
L+V + ++ E D+QNQFS FGE+ ++ +
Sbjct: 10 LYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AB109030-1|BAC99315.1| 1167|Homo sapiens Nop132 protein.
Length = 1167
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 458
L+V + ++ E D+QNQFS FGE+ ++ +
Sbjct: 10 LYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>AB105104-1|BAD12268.1| 1167|Homo sapiens nucleolar protein 8
protein.
Length = 1167
Score = 35.5 bits (78), Expect = 0.23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHL 458
L+V + ++ E D+QNQFS FGE+ ++ +
Sbjct: 10 LYVGGLSQDISEADLQNQFSRFGEVSDVEI 39
>CR456490-1|CAG30376.1| 655|Homo sapiens EWSR1 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
GG A ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 322 GGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 381
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 382 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 441
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 442 SLARKKPPMNSMR 454
>BC072442-1|AAH72442.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
GG A ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 322 GGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 381
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 382 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 441
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 442 SLARKKPPMNSMR 454
>BC011048-1|AAH11048.1| 655|Homo sapiens Ewing sarcoma breakpoint
region 1 protein.
Length = 655
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
GG A ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 322 GGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 381
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 382 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 441
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 442 SLARKKPPMNSMR 454
>AK056309-1|BAB71145.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ31747 fis, clone NT2RI2007377, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 661
Score = 35.1 bits (77), Expect = 0.30
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Frame = +3
Query: 261 GGGSAAERGNRGRYDSLAPEG---DSGTP-GPQRSVEGWILFVSNVHEEAQEEDIQNQFS 428
GG A ERG + EG D G P P + ++V +++ +D+ + F
Sbjct: 328 GGMGAGERGGFNKPGGPMDEGPDLDLGPPVDPDEDSDNSAIYVQGLNDSVTLDDLADFFK 387
Query: 429 EFGEIKN--------IHLNLDRRTGFLKGYALVE*RLINKPLVHVKHWMAQIYSAKRYQL 584
+ G +K IH+ LD+ TG KG A V V+ + + + + ++
Sbjct: 388 QCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKV 447
Query: 585 IGASSRDPLNHIR 623
A + P+N +R
Sbjct: 448 SLARKKPPMNSMR 460
>U23731-1|AAA70033.1| 414|Homo sapiens TAR DNA-binding protein-43
protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
L V + + E+D++ FS FGE+ + + D +TG KG+ V
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>EF434182-1|ABO32291.1| 414|Homo sapiens TDP43 splice variant 1
protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
L V + + E+D++ FS FGE+ + + D +TG KG+ V
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>EF434181-1|ABO32290.1| 416|Homo sapiens TDP43 protein.
Length = 416
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
L V + + E+D++ FS FGE+ + + D +TG KG+ V
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>DQ160195-1|AAZ93379.1| 314|Homo sapiens cyclophilin-33B protein.
Length = 314
Score = 34.7 bits (76), Expect = 0.40
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 366 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
+L+V + EE ++ + F FG+I +I + LD T +G+A VE
Sbjct: 7 VLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVE 53
>CR533534-1|CAG38565.1| 414|Homo sapiens TARDBP protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
L V + + E+D++ FS FGE+ + + D +TG KG+ V
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>BC107736-1|AAI07737.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.40
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 366 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
+L+V + EE ++ + F FG+I +I + LD T +G+A VE
Sbjct: 7 VLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVE 53
>BC095435-1|AAH95435.1| 414|Homo sapiens TAR DNA binding protein
protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
L V + + E+D++ FS FGE+ + + D +TG KG+ V
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>BC071657-1|AAH71657.1| 414|Homo sapiens TARDBP protein protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALV 503
L V + + E+D++ FS FGE+ + + D +TG KG+ V
Sbjct: 106 LIVLGLPWKTTEQDLKEYFSTFGEVLMVQVKKDLKTGHSKGFGFV 150
>BC008451-1|AAH08451.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.40
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 366 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
+L+V + EE ++ + F FG+I +I + LD T +G+A VE
Sbjct: 7 VLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVE 53
>BC004898-1|AAH04898.1| 301|Homo sapiens peptidylprolyl isomerase E
(cyclophilin E) protein.
Length = 301
Score = 34.7 bits (76), Expect = 0.40
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 366 ILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYALVE 506
+L+V + EE ++ + F FG+I +I + LD T +G+A VE
Sbjct: 7 VLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVE 53
>AL353135-4|CAI16247.1| 262|Homo sapiens RP11-63L7.3 protein.
Length = 262
Score = 34.7 bits (76), Expect = 0.40
Identities = 14/43 (32%), Positives = 27/43 (62%)
Frame = +3
Query: 369 LFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGYA 497
LF+ NV + + ED++ +F +G I ++++ LD T +G+A
Sbjct: 12 LFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFA 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,368,016
Number of Sequences: 237096
Number of extensions: 1875885
Number of successful extensions: 11024
Number of sequences better than 10.0: 418
Number of HSP's better than 10.0 without gapping: 5341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10840
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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