Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0234
         (685 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical pr...    51   9e-07
X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP translo...    51   9e-07
Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical pr...    50   2e-06
U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical pr...    50   2e-06
AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical ...    42   4e-04
U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical pr...    40   0.002
Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical pr...    37   0.015
Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical pr...    35   0.047
Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical pr...    31   1.0  
AF039712-2|AAK21401.1|  401|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z82059-6|CAB04874.1|  300|Caenorhabditis elegans Hypothetical
           protein T27E9.1a protein.
          Length = 300

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 270 SAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>X76112-1|CAA53718.1|  300|Caenorhabditis elegans ADP/ATP
           translocase protein.
          Length = 300

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           SA FKGA SNV RGTGGA VL +YDEI+K L
Sbjct: 270 SAMFKGALSNVFRGTGGALVLAIYDEIQKFL 300


>Z68218-2|CAA92472.1|  313|Caenorhabditis elegans Hypothetical
           protein K01H12.2 protein.
          Length = 313

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 283 SAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>U80931-5|AAB38001.1|  313|Caenorhabditis elegans Hypothetical
           protein T01B11.4 protein.
          Length = 313

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = +3

Query: 3   SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           SA FKGA SNV RGTGGA VL +YDEI+K +
Sbjct: 283 SAMFKGALSNVFRGTGGALVLAIYDEIQKFI 313


>AF003141-4|AAK21485.1|  300|Caenorhabditis elegans Hypothetical
           protein W02D3.6 protein.
          Length = 300

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +3

Query: 3   SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           +A +KG  SNV R TGGA VL +YDEI+ ++
Sbjct: 270 TALYKGGLSNVFRATGGALVLTIYDEIQHLI 300


>U64842-4|AAB37086.2|  306|Caenorhabditis elegans Hypothetical
           protein F25B4.7 protein.
          Length = 306

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +3

Query: 6   AFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           AFF GA  N +RGTG A VL +Y+E++K +
Sbjct: 277 AFFHGALVNAIRGTGAALVLAIYNELQKYM 306


>Z68882-2|CAA93110.1|  306|Caenorhabditis elegans Hypothetical
           protein C47E12.2 protein.
          Length = 306

 Score = 36.7 bits (81), Expect = 0.015
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 12  FKGAFSNVLRGTGGAFVLVLYDEIKK 89
           +KGA +N+ R  GGA V+ LY+EI K
Sbjct: 279 YKGALANIFRSAGGALVMALYEEIHK 304


>Z49207-2|CAA89069.1|  298|Caenorhabditis elegans Hypothetical
           protein R07E3.4 protein.
          Length = 298

 Score = 35.1 bits (77), Expect = 0.047
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +3

Query: 3   SAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 95
           + F++GA +N LR TGGA ++  Y E  K +
Sbjct: 268 NGFYRGALTNSLRSTGGALIITFYYEFSKYM 298


>Z81577-1|CAB04651.3|  289|Caenorhabditis elegans Hypothetical
           protein R11.1 protein.
          Length = 289

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 6   AFFKGAFSNVLR-GTGGAFVLVLYDEI 83
           A +KG    V+R G GGA +L++YDE+
Sbjct: 255 ALYKGLLPKVMRLGPGGAVMLIVYDEV 281


>AF039712-2|AAK21401.1|  401|Caenorhabditis elegans Hypothetical
           protein F54D7.3 protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 678 NQSTKCQRYHNQLQIT*FLHLIAIMCTEVKNTLHNYV 568
           NQ  K +R H+ L      HL+  +    K  LHNY+
Sbjct: 48  NQLVKVRRVHSLLLHMNIAHLLVTLVVMPKEILHNYM 84


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,995,386
Number of Sequences: 27780
Number of extensions: 263523
Number of successful extensions: 404
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)