Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0233
(788 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 116 3e-27
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 108 1e-24
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 91 2e-19
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 72 8e-14
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 72 1e-13
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 69 1e-12
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 64 2e-11
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 62 7e-11
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 61 2e-10
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 59 6e-10
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 58 2e-09
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 52 9e-08
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 52 1e-07
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 51 2e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 50 3e-07
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 48 1e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 47 4e-06
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 43 6e-05
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 42 1e-04
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 32 0.11
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 30 0.43
SPCC645.13 |||transcription elongation regulator|Schizosaccharom... 30 0.43
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 1.8
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 27 3.1
SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex ... 27 3.1
SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde d... 27 4.0
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 26 5.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 5.4
SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual 26 5.4
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 9.4
SPAC4G8.06c |trm12||tRNA methyltransferase Trm12 |Schizosaccharo... 25 9.4
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 116 bits (280), Expect = 3e-27
Identities = 47/84 (55%), Positives = 72/84 (85%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 436
F TITT+YYRGAMGI+L+YD+T++K+FD++ W N+++HA+E+V K+++GNKCD E++R
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQR 130
Query: 437 VVSKERGEAIAREHGIRFMETSAK 508
VS E+G+A+A E G++F+E SAK
Sbjct: 131 QVSFEQGQALADELGVKFLEASAK 154
Score = 114 bits (274), Expect = 2e-26
Identities = 51/69 (73%), Positives = 62/69 (89%)
Frame = +3
Query: 48 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 227
M+ K+YD L KLLLIGDSGVGK+C+L RFS++ FT +FI+TIGIDFKI+T+EL GK+IKL
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 228 QIWDTAGQE 254
QIWDTAGQE
Sbjct: 61 QIWDTAGQE 69
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 108 bits (259), Expect = 1e-24
Identities = 47/64 (73%), Positives = 57/64 (89%)
Frame = +3
Query: 63 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 242
YD LFKLLLIGDSGVGK+C+L RF+D+ +T ++ISTIG+DFKI+T EL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 243 AGQE 254
AGQE
Sbjct: 65 AGQE 68
Score = 91.1 bits (216), Expect = 2e-19
Identities = 40/84 (47%), Positives = 61/84 (72%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 436
F TIT+SYYRGA GI++VYD+T++ +F+++ +WL+ ID +A E V ++++GNK DM +K+
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKK 129
Query: 437 VVSKERGEAIAREHGIRFMETSAK 508
VV + A I F+ETSAK
Sbjct: 130 VVEYSVAKEFADSLNIPFLETSAK 153
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 91.1 bits (216), Expect = 2e-19
Identities = 37/83 (44%), Positives = 60/83 (72%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 436
+ IT++YYRGA+G ++VYDIT + +FD++ +WL+ + EHA+ ++ M++GNK D+ R
Sbjct: 72 YRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLR 131
Query: 437 VVSKERGEAIAREHGIRFMETSA 505
VS E +A A E+ + F+ETSA
Sbjct: 132 AVSTEEAQAFAAENNLSFIETSA 154
Score = 81.8 bits (193), Expect = 1e-16
Identities = 38/64 (59%), Positives = 46/64 (71%)
Frame = +3
Query: 63 YDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDT 242
YD LFK +LIGDSGVGK+ +L RF+ N F STIG++F + + L KKIK QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 243 AGQE 254
AGQE
Sbjct: 67 AGQE 70
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 72.1 bits (169), Expect = 8e-14
Identities = 34/84 (40%), Positives = 53/84 (63%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 436
F ++ SY R + ++VYDITN +F + KW+ ++ +DV +++GNK D+ +KR
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKR 132
Query: 437 VVSKERGEAIAREHGIRFMETSAK 508
V++E GE A+E I METSAK
Sbjct: 133 QVTQEEGEKKAKELKIMHMETSAK 156
Score = 70.1 bits (164), Expect = 3e-13
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +3
Query: 75 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
FKL+ +G+ VGKT ++ RF + F T+ +TIGIDF KT+ L + ++LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 71.7 bits (168), Expect = 1e-13
Identities = 35/73 (47%), Positives = 48/73 (65%), Gaps = 4/73 (5%)
Frame = +3
Query: 48 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL----RGK 215
M K++YD L K++L G SG GK+C+L RF N + T+GIDF + + + + K
Sbjct: 1 MDKESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQK 60
Query: 216 KIKLQIWDTAGQE 254
+IKLQIWDTAGQE
Sbjct: 61 RIKLQIWDTAGQE 73
Score = 63.3 bits (147), Expect = 4e-11
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 436
F ++ +YYRGA G +LVYD+TN+ +F+++ WL +I A + ++ G+K D++ +R
Sbjct: 75 FRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVLAGSKSDLQNQR 134
Query: 437 VVS-KERGEAIAREHGIRFMETSA 505
VS +E E + +H ETS+
Sbjct: 135 QVSTEEAAEFCSEKHISSAHETSS 158
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 68.5 bits (160), Expect = 1e-12
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +3
Query: 69 LLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAG 248
+ K++++GDSGVGKTC++ +F + F+ + +TIG DF K V + K + LQ+WDTAG
Sbjct: 7 VFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAG 66
Query: 249 QE 254
QE
Sbjct: 67 QE 68
Score = 44.8 bits (101), Expect = 1e-05
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANED---VEKMILGNKCDME 427
F ++ ++YRGA ++VY++ N K+FD + W + ++D +I+GN+ D +
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 428 -EKRVVSKERG-EAIAREHGIRFM--ETSAK 508
KR VS R + +HG + E SAK
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAK 160
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 64.1 bits (149), Expect = 2e-11
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 48 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 227
MA K LL K++++G+SGVGKT I+ ++ + F+ + +TIG DF K V + K + L
Sbjct: 1 MAGKKKHLL-KVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTL 59
Query: 228 QIWDTAGQE 254
Q+WDTAGQE
Sbjct: 60 QLWDTAGQE 68
Score = 58.4 bits (135), Expect = 1e-09
Identities = 35/90 (38%), Positives = 51/90 (56%), Gaps = 6/90 (6%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKW----LRNIDEHANEDVEKMILGNKCDM 424
F ++ ++YRGA +LVYD+ N K+F+ + W L E ++LGNK D+
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 425 EE-KRVVSKERGEAIAREHG-IRFMETSAK 508
EE KR+VSK + A + G I + ETSAK
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAK 159
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 62.5 bits (145), Expect = 7e-11
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL-GNKCDMEEK 433
+ + Y R G +LVY+IT+ +FD+I + + I ++D ++L NKCD+E +
Sbjct: 69 YSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAE 128
Query: 434 RVVSKERGEAIAREHGIRFMETSAK 508
RVVS+ GE +A+ ++ETSAK
Sbjct: 129 RVVSRAEGEQLAKSMHCLYVETSAK 153
Score = 49.6 bits (113), Expect = 5e-07
Identities = 25/75 (33%), Positives = 42/75 (56%)
Frame = +3
Query: 54 KKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQI 233
+ TY +KL+++GD GVGK+ + + +HF + TI ++ K E+ G+ L +
Sbjct: 2 RSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDV 60
Query: 234 WDTAGQEVSTPSRRR 278
DTAGQE + R +
Sbjct: 61 LDTAGQEEYSAMREQ 75
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 61.3 bits (142), Expect = 2e-10
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDM-EEK 433
+ ++ YYR A ++VYDIT + + W++ + A E + + GNK D+ +E+
Sbjct: 77 YKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQER 136
Query: 434 RVVSKERGEAIAREHGIRFMETSAK 508
R V K EA A E + F ETSAK
Sbjct: 137 RAVEKADAEAYAAEANLLFFETSAK 161
Score = 56.4 bits (130), Expect = 4e-09
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVEL-RGKKIKLQIWDTAGQE 254
KL+L+GDS VGK+ ++ RF + F STIG F +T+ + +KL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 59.3 bits (137), Expect = 6e-10
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +3
Query: 60 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 239
T +L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ I+L +WD
Sbjct: 2 TTELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWD 60
Query: 240 TAGQE 254
TAGQE
Sbjct: 61 TAGQE 65
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 57.6 bits (133), Expect = 2e-09
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +3
Query: 66 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 245
+L KL+++GD GKTC+L FS F ++ T+ ++ + VE+ G+ ++L +WDTA
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTA 62
Query: 246 GQE 254
GQE
Sbjct: 63 GQE 65
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 52.0 bits (119), Expect = 9e-08
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIK-TVELRGKKIKLQIWDTAGQE 254
KL+++GD G GKTC+L FS F ++ T+ ++ T K I+L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 51.6 bits (118), Expect = 1e-07
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 66 DLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTA 245
++ K+ +IGDS +GKT ++ + F T+G++F KT+ +R +I IWD
Sbjct: 8 NVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLG 67
Query: 246 GQ 251
GQ
Sbjct: 68 GQ 69
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 51.2 bits (117), Expect = 2e-07
Identities = 22/59 (37%), Positives = 38/59 (64%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
KL+++GD GKT +L F+ +F T ++ T+ ++ + + GK ++L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQE 67
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 50.4 bits (115), Expect = 3e-07
Identities = 23/60 (38%), Positives = 33/60 (55%)
Frame = +3
Query: 75 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
FKL+L+GD G GKT + R F +I+T+G++ +I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Score = 41.5 bits (93), Expect = 1e-04
Identities = 21/77 (27%), Positives = 46/77 (59%)
Frame = +2
Query: 278 YYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERG 457
Y +G GI++ +D+T+ T+ ++ W R++ E++ ++ GNK D++E++V K +
Sbjct: 79 YIQGQCGIIM-FDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKERKV--KAKA 134
Query: 458 EAIAREHGIRFMETSAK 508
R+ +++ + SAK
Sbjct: 135 ITFHRKKNLQYYDISAK 151
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 48.4 bits (110), Expect = 1e-06
Identities = 21/59 (35%), Positives = 38/59 (64%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
K +++GD VGKTC+L ++ N F + ++ T+ ++ + TV + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQE 62
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 46.8 bits (106), Expect = 4e-06
Identities = 22/59 (37%), Positives = 36/59 (61%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
K++++GD GKT +L F+ +F + TI ++ I + + G I+L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQE 72
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 42.7 bits (96), Expect = 6e-05
Identities = 18/59 (30%), Positives = 36/59 (61%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
++ ++G VGK+ + ++ +NHF ++ TI F K ++ +G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQD 65
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 41.5 bits (93), Expect = 1e-04
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +3
Query: 78 KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQEV 257
++L++G GKT IL++ N T I T+G F ++TV K IK +WD GQ+
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQSVVT-IPTVG--FNVETVTY--KNIKFNVWDVGGQDK 77
Query: 258 STP 266
P
Sbjct: 78 IRP 80
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 31.9 bits (69), Expect = 0.11
Identities = 27/78 (34%), Positives = 39/78 (50%)
Frame = -3
Query: 519 IYVRLADVSMKRMPCSRAIASPRSLLTTRFSSISHLLPSIIFSTSSFACSSIFRNHLTIS 340
I+V+ D+S M + SPRSLLT FS PSIIF + S+F +H +S
Sbjct: 733 IHVQSLDISELLMDTT---TSPRSLLTKIFSEARKNAPSIIFINNVEKWPSLF-SHSFLS 788
Query: 339 SNVFSFVMSYTSMMPIAP 286
F++ S+ P+ P
Sbjct: 789 ----MFLLLLDSISPLEP 802
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 29.9 bits (64), Expect = 0.43
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +2
Query: 308 VYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHGIR 487
VY ++ DDI L +D+H N D+ + +LG+K + + V+ + +E +
Sbjct: 720 VYSRSDIYLLDDI---LSAVDQHVNRDLVRNLLGSKGLLRSRCVILSTNSLTVLKEASMI 776
Query: 488 FMETSAK 508
+M + K
Sbjct: 777 YMLRNGK 783
>SPCC645.13 |||transcription elongation
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 29.9 bits (64), Expect = 0.43
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 368 DEHANEDVEKMILGNKCDMEEKRVVSKERGEAIAREHG 481
+EH D+ GN+ + EE VVS + EAI +E G
Sbjct: 84 EEHQTADLLASNEGNEKNNEENNVVSSDSKEAITKESG 121
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 27.9 bits (59), Expect = 1.8
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Frame = +3
Query: 75 FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGID-----FKIKTVELRGKKIKLQ 230
F L+L G+SG+GKT F + F+TT S +G + KTVE+ K +L+
Sbjct: 29 FTLMLCGESGLGKT----TFCNTLFSTTIKSHMGPEKVRAKHAEKTVEIEITKAELE 81
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 362 NIDEHANEDVEKMILGNKCDMEEKRVVSKERGEAI 466
+I+ H N D + I + D+ EKR V K++ E I
Sbjct: 18 DIEVHPNVDKKSFIRWRQRDIHEKRAVRKQKMEDI 52
>SPAC3H1.01c |orp3|orc3, SPAP14E8.06c|origin recognition complex
subunit Orp3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 3.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 314 DITNEKTFDDIVKWLRNIDEHANEDVEK 397
+IT T+D + LR + EHA+E V++
Sbjct: 63 EITTHTTYDSNARVLRQLCEHASEPVDE 90
>SPCC13B11.04c ||SPCC777.01c|glutathione-dependent formaldehyde
dehydrogenase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 243 AGQEVSTPSRRRITAALWASCSY 311
AGQE+ST + +T +W C++
Sbjct: 302 AGQEISTRPFQLVTGRVWRGCAF 324
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 26.2 bits (55), Expect = 5.4
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3
Query: 84 LLIGDSGVGKTCIL 125
+L+GD+ GKTCIL
Sbjct: 1873 ILVGDTATGKTCIL 1886
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 5.4
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3
Query: 474 SRAIASPRSLLTTRFSSISHLLPSIIFSTSSFACSSIFRNHLTISSNVFSFVMS 313
S ASP S T S+ S L S ++SS A SSI + L SS S + S
Sbjct: 98 STTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLAS 151
>SPAC4A8.10 |||lipase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 723
Score = 26.2 bits (55), Expect = 5.4
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -2
Query: 301 DAHSAAVIRRRDGVETSCPAVSHIWSFIFLPLNSTVFILKSIPIVEIKVVVKWLSE 134
DAH+ ++RRR + H+ +F ST + + I E WLSE
Sbjct: 661 DAHNTMIVRRRFPNAYGWTVIKHLTEILFEQNTSTAY-MNPISFDE-TTTAAWLSE 714
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 25.4 bits (53), Expect = 9.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 45 KMAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNH 146
K + T D+ F+L+L+ D G K +L F NH
Sbjct: 30 KQYQSTKDVTFRLVLVQDIGDRKKTVL--FDSNH 61
>SPAC4G8.06c |trm12||tRNA methyltransferase Trm12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 25.4 bits (53), Expect = 9.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 40 FVKWPKKHTTCYSNCFSSVTPELEKRAY 123
F K K+T C +NC S +P + Y
Sbjct: 386 FSKMLAKNTVCVTNCVKSFSPRVSHIVY 413
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,079,935
Number of Sequences: 5004
Number of extensions: 62851
Number of successful extensions: 243
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 230
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 383374054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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