Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0233
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            69   2e-13
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    47   8e-07
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   3.5  
AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    24   6.2  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 68.9 bits (161), Expect = 2e-13
 Identities = 30/84 (35%), Positives = 48/84 (57%)
 Frame = +2

Query: 257 FHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMILGNKCDMEEKR 436
           +H++   YYRGA   ++VYDI N  +F     W++ +   A+ ++   + GNK D+   R
Sbjct: 86  YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASPNIVIALAGNKADLANSR 145

Query: 437 VVSKERGEAIAREHGIRFMETSAK 508
           VV  E  +  A ++ + FMETSAK
Sbjct: 146 VVDYEEAKQYADDNRLLFMETSAK 169



 Score = 56.4 bits (130), Expect = 9e-10
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +3

Query: 75  FKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
           FKL+L+G+S VGK+ ++ RF    F     STIG  F  +T+ +    +K +IWDTAGQE
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQE 84


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 46.8 bits (106), Expect = 8e-07
 Identities = 21/59 (35%), Positives = 36/59 (61%)
 Frame = +3

Query: 78  KLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQE 254
           K +++GD  VGKTC+L  ++ + F   ++ T   ++    V + G ++ L +WDTAGQE
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMV-VDGVQVSLGLWDTAGQE 65


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 230  DMGHCWAGGFHTITTSYY 283
            ++G+CW    HT+   YY
Sbjct: 1678 ELGNCWHVVLHTVKPDYY 1695


>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 276 DVVMVWKPPAQQCPISGALFSYPLI 202
           D+V  W+     C +SG+LF  P +
Sbjct: 377 DLVEAWRWQLYMCWVSGSLFVVPAL 401


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,762
Number of Sequences: 2352
Number of extensions: 14615
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)