Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0231
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.52 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.52 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.52 
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   2.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   6.4  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 713 GPRRPFFNGNLMSSMWVWIL 772
           G R P    + M+ +WVW++
Sbjct: 118 GSRNPIHTSSYMTGIWVWLI 137


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 713 GPRRPFFNGNLMSSMWVWIL 772
           G R P    + M+ +WVW++
Sbjct: 351 GSRNPIHTSSYMTGIWVWLI 370


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 25.4 bits (53), Expect = 0.52
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 713 GPRRPFFNGNLMSSMWVWIL 772
           G R P    + M+ +WVW++
Sbjct: 351 GSRNPIHTSSYMTGIWVWLI 370


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 398 TSSPPCKTTICP 363
           T + PCK TICP
Sbjct: 3   THTLPCKCTICP 14


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 59  SLFIFNLIFTYLSC 18
           SLFIF+LIF    C
Sbjct: 144 SLFIFDLIFLSFRC 157


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 681 DNVSNVSGIKLWSTSFISANII 616
           DNV+N + I  WS  F+   I+
Sbjct: 165 DNVANFNKIFGWSLIFLFGRIV 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,962
Number of Sequences: 336
Number of extensions: 4448
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)