SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0231
         (789 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR541669-1|CAG46470.1|  493|Homo sapiens PEPD protein.                 97   8e-20
BT006692-1|AAP35338.1|  493|Homo sapiens peptidase D protein.          97   8e-20
BC028295-1|AAH28295.1|  493|Homo sapiens PEPD protein protein.         97   8e-20
BC015027-1|AAH15027.1|  493|Homo sapiens peptidase D protein.          97   8e-20
BC004305-1|AAH04305.1|  493|Homo sapiens peptidase D protein.          97   8e-20
J04605-1|AAA60064.1|  493|Homo sapiens prolidase protein.              94   6e-19

>CR541669-1|CAG46470.1|  493|Homo sapiens PEPD protein.
          Length = 493

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 286 MGPGTLEVPLSLFATNRRRLANKLK------SGQIVVLQGGEDVNHYDTDVQYVFRQEAY 447
           +G  TL+VPL+LFA NR+RL  +L+      +G IVVLQGGE+   Y TD   +FRQE++
Sbjct: 11  LGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESF 70

Query: 448 FTWVCGVREPGCYFALDVSTASLTSLCPDFLRSMKSGWANSMACSDFKNIYAVDE 612
           F W  GV EPGCY  +DV T   T   P    S  +      +   FK  YAVD+
Sbjct: 71  FHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDD 125


>BT006692-1|AAP35338.1|  493|Homo sapiens peptidase D protein.
          Length = 493

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 286 MGPGTLEVPLSLFATNRRRLANKLK------SGQIVVLQGGEDVNHYDTDVQYVFRQEAY 447
           +G  TL+VPL+LFA NR+RL  +L+      +G IVVLQGGE+   Y TD   +FRQE++
Sbjct: 11  LGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESF 70

Query: 448 FTWVCGVREPGCYFALDVSTASLTSLCPDFLRSMKSGWANSMACSDFKNIYAVDE 612
           F W  GV EPGCY  +DV T   T   P    S  +      +   FK  YAVD+
Sbjct: 71  FHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDD 125


>BC028295-1|AAH28295.1|  493|Homo sapiens PEPD protein protein.
          Length = 493

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 286 MGPGTLEVPLSLFATNRRRLANKLK------SGQIVVLQGGEDVNHYDTDVQYVFRQEAY 447
           +G  TL+VPL+LFA NR+RL  +L+      +G IVVLQGGE+   Y TD   +FRQE++
Sbjct: 11  LGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESF 70

Query: 448 FTWVCGVREPGCYFALDVSTASLTSLCPDFLRSMKSGWANSMACSDFKNIYAVDE 612
           F W  GV EPGCY  +DV T   T   P    S  +      +   FK  YAVD+
Sbjct: 71  FHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDD 125


>BC015027-1|AAH15027.1|  493|Homo sapiens peptidase D protein.
          Length = 493

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 286 MGPGTLEVPLSLFATNRRRLANKLK------SGQIVVLQGGEDVNHYDTDVQYVFRQEAY 447
           +G  TL+VPL+LFA NR+RL  +L+      +G IVVLQGGE+   Y TD   +FRQE++
Sbjct: 11  LGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESF 70

Query: 448 FTWVCGVREPGCYFALDVSTASLTSLCPDFLRSMKSGWANSMACSDFKNIYAVDE 612
           F W  GV EPGCY  +DV T   T   P    S  +      +   FK  YAVD+
Sbjct: 71  FHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDD 125


>BC004305-1|AAH04305.1|  493|Homo sapiens peptidase D protein.
          Length = 493

 Score = 96.7 bits (230), Expect = 8e-20
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +1

Query: 286 MGPGTLEVPLSLFATNRRRLANKLK------SGQIVVLQGGEDVNHYDTDVQYVFRQEAY 447
           +G  TL+VPL+LFA NR+RL  +L+      +G IVVLQGGE+   Y TD   +FRQE++
Sbjct: 11  LGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFRQESF 70

Query: 448 FTWVCGVREPGCYFALDVSTASLTSLCPDFLRSMKSGWANSMACSDFKNIYAVDE 612
           F W  GV EPGCY  +DV T   T   P    S  +      +   FK  YAVD+
Sbjct: 71  FHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDD 125


>J04605-1|AAA60064.1|  493|Homo sapiens prolidase protein.
          Length = 493

 Score = 93.9 bits (223), Expect = 6e-19
 Identities = 50/115 (43%), Positives = 65/115 (56%), Gaps = 6/115 (5%)
 Frame = +1

Query: 286 MGPGTLEVPLSLFATNRRRLANKLK------SGQIVVLQGGEDVNHYDTDVQYVFRQEAY 447
           +G  TL+VPL+LFA NR+RL  +L+      +G IVVLQGGE+   Y TD   +F QE++
Sbjct: 11  LGNETLKVPLALFALNRQRLCERLRKNPAVQAGSIVVLQGGEETQRYCTDTGVLFLQESF 70

Query: 448 FTWVCGVREPGCYFALDVSTASLTSLCPDFLRSMKSGWANSMACSDFKNIYAVDE 612
           F W  GV EPGCY  +DV T   T   P    S  +      +   FK  YAVD+
Sbjct: 71  FHWAFGVTEPGCYGVIDVDTGKSTLFVPRLPASHATWMGKIHSKEHFKEKYAVDD 125


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,726,765
Number of Sequences: 237096
Number of extensions: 2516786
Number of successful extensions: 16095
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16079
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -