Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0231
         (789 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.4  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.7  
AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase pro...    22   5.7  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -1

Query: 90 LSLYIKVLTLFFVYFQLN 37
          LSL I  L L+F+YF+++
Sbjct: 16 LSLLIPALILYFIYFRIS 33


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 352 YLLIFVGLLRTKITALQ 302
           YLL+F+GL    +T +Q
Sbjct: 247 YLLVFIGLQSLSLTNIQ 263


>AY526236-1|AAS20469.1|   85|Apis mellifera epoxide hydrolase
           protein.
          Length = 85

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 701 WSVVWAQTMSAMFPASNFGVH 639
           W  V A  M+ +FP    G+H
Sbjct: 5   WGSVIASDMAVLFPEKIIGLH 25


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,411
Number of Sequences: 438
Number of extensions: 5042
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)