Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0229
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35) 82 5e-16
SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43) 58 7e-09
SB_15482| Best HMM Match : LIM (HMM E-Value=0) 58 7e-09
SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42) 58 7e-09
SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40) 46 2e-05
SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34) 46 3e-05
SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14) 42 5e-04
SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 9e-04
SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22) 39 0.005
SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15) 39 0.005
SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26) 37 0.015
SB_13716| Best HMM Match : LIM (HMM E-Value=0) 36 0.025
SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32) 32 0.41
SB_59754| Best HMM Match : rve (HMM E-Value=8e-19) 30 1.7
SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_31367| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37) 28 8.9
SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0) 28 8.9
>SB_20426| Best HMM Match : LIM (HMM E-Value=3e-35)
Length = 160
Score = 81.8 bits (193), Expect = 5e-16
Identities = 31/63 (49%), Positives = 40/63 (63%)
Frame = +3
Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCG 689
++++L AL YWH GCLKC CC L D+G S Y K +ILCK DY R+FG C+ C
Sbjct: 26 DKYVLQALGSYWHEGCLKCECCDSRLGDIGSSLYSKANLILCKRDYLRLFGIPGVCSHCN 85
Query: 690 QTI 698
+ I
Sbjct: 86 KPI 88
>SB_30891| Best HMM Match : LIM (HMM E-Value=4.40008e-43)
Length = 511
Score = 58.0 bits (134), Expect = 7e-09
Identities = 30/67 (44%), Positives = 38/67 (56%)
Frame = +3
Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCG 689
ERF L A+D+ WH CLKC+ C L D + + K G+ILC+ DY R F S C+ C
Sbjct: 257 ERFYLMAVDQEWHADCLKCSDCELRL-DNELTCFSKDGVILCREDYYRRF-SVKKCSSCS 314
Query: 690 QTIPXNE 710
Q I E
Sbjct: 315 QAISSKE 321
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRM 656
+ ++ A D+ +H C C C + LA G F +G I CK DY +
Sbjct: 320 KELVMRARDQVYHVNCFACDRCKRMLAT-GEYFGMRGIRIYCKEDYEEL 367
>SB_15482| Best HMM Match : LIM (HMM E-Value=0)
Length = 349
Score = 58.0 bits (134), Expect = 7e-09
Identities = 26/67 (38%), Positives = 39/67 (58%)
Frame = +3
Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCG 689
+RFL+ +D WH CL+C C L+ RS + K + C+ DY ++F G+ C+ C
Sbjct: 55 DRFLMKVVDEAWHESCLQCCICRSQLS---RSCFSKDRKLYCRTDYEKVF--GTKCSGCK 109
Query: 690 QTIPXNE 710
+TIP NE
Sbjct: 110 KTIPANE 116
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRM 656
++ AL +H C CT CG L + G+ F K + CK D+ ++
Sbjct: 118 VMRALGNVYHLHCFVCTMCGHIL-EKGQEFALKDNKLYCKADFAKL 162
>SB_1883| Best HMM Match : LIM (HMM E-Value=2.20004e-42)
Length = 328
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/68 (41%), Positives = 37/68 (54%)
Frame = +3
Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCG 689
+R+L+ R WH CLKC C L + Y K G I CK DY R F G+ CA CG
Sbjct: 111 DRYLVKVSGRAWHTKCLKCCLCSDELG-REATCYTKDGKIYCKADYARQF--GTKCARCG 167
Query: 690 QTIPXNEF 713
++I N++
Sbjct: 168 RSIHANDW 175
>SB_2217| Best HMM Match : LIM (HMM E-Value=1.2e-40)
Length = 434
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCG 689
++FLL LD WH C++C+ C L + R F + G + CK D+ R + G+ C+ C
Sbjct: 14 DKFLLKVLDGVWHAQCVQCSDCKCPLTE--RCF-SREGKLFCKTDFYRRY--GTKCSGCD 68
Query: 690 QTIPXNE 710
Q I N+
Sbjct: 69 QGISPND 75
Score = 28.7 bits (61), Expect = 5.1
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = +3
Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647
+H C C+ C + + +Y G +C++DY
Sbjct: 85 FHVDCFVCSYCKRQITTGDELYYIGDGSFICRDDY 119
>SB_26945| Best HMM Match : PET (HMM E-Value=7.4e-34)
Length = 621
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +3
Query: 534 DRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
D+ WH GC CT C L D+ +++K G+I C Y F CA C + I
Sbjct: 331 DKCWHPGCFVCTVCNNLLVDL--IYFYKDGVIYCGRHYAEQF--KPRCAACDELI 381
>SB_40829| Best HMM Match : LIM (HMM E-Value=1.7e-14)
Length = 82
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +3
Query: 525 HALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
+A+ + +H+ C +C C + L+ FY +G + CK DY F S C +C I
Sbjct: 25 YAIGKRFHNACFRCVVCEERLST---DFYARGSELYCKKDYLSKF--NSVCHICAHNI 77
>SB_38221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 41.1 bits (92), Expect = 9e-04
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = +3
Query: 534 DRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713
DR+WH C C C + L G+ F F ILC N Y + C CGQ I
Sbjct: 358 DRHWHDKCFICDICRRPLKSDGK-FTFYRDQILCNNCYVANY--QKECFACGQMIDSGAS 414
Query: 714 RDE 722
R E
Sbjct: 415 RLE 417
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 540 YWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
+WH C +C CG+A+ G F K C Y F CA CG+ +
Sbjct: 422 FWHENCFRCANCGEAIGTSG--FVPKDDTFFCPGCYQSKF--SKRCASCGEPL 470
>SB_22219| Best HMM Match : LIM (HMM E-Value=8.2e-22)
Length = 163
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 540 YWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
+WH C +C CG+A+ G F K C Y F CA CG+ +
Sbjct: 10 FWHENCFRCANCGEAIGTSG--FVPKDDTFFCPGCYQSKF--SKRCASCGEPL 58
>SB_57744| Best HMM Match : LIM (HMM E-Value=4.3e-15)
Length = 85
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 528 ALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFG 662
A+ + WH CL C CC ++L + K G I CK Y + FG
Sbjct: 25 AIGKKWHKSCLTCKCCNKSLD--STNLADKDGEIYCKGCYGKNFG 67
>SB_31712| Best HMM Match : LIM (HMM E-Value=9e-26)
Length = 481
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +3
Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRM 656
++ AL +H C CT CG L + G+ F K + CK D+ ++
Sbjct: 20 VMRALGNVYHLHCFVCTMCGHIL-EKGQEFALKDNKLYCKADFAKL 64
>SB_13716| Best HMM Match : LIM (HMM E-Value=0)
Length = 401
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +3
Query: 528 ALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMF 659
ALD+ WH C CG D G F+ + G C+ DY MF
Sbjct: 355 ALDQTWHPEHFVCAECGNPFGDTG--FHERDGKPFCREDYYAMF 396
>SB_9083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 35.1 bits (77), Expect = 0.059
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 522 LHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686
L AL++ WH C CT C L+ + G C+ DY +F G CA C
Sbjct: 102 LLALEKQWHLWCFSCTKCHCLLS---LEYMGMDGKPYCEKDYQELF--GVTCAAC 151
>SB_3515| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1295
Score = 35.1 bits (77), Expect = 0.059
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 546 HHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
HH +C C + L+ FY +G + CK DY F S C +C I
Sbjct: 734 HHTLNQCVVCEERLST---DFYARGSELYCKKDYLSKF--NSVCHICAHNI 779
>SB_34203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
++HAL + WH C C + G +Y + G+ C+ Y ++ G C C + I
Sbjct: 92 VVHALGKAWHVEHFVCAKCEKPF--YGHRYYERKGLAYCETHYNELY--GDICFECNKAI 147
Score = 31.1 bits (67), Expect = 0.96
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 519 LLHALDRYWHHGCLKCTCCGQALADMG 599
++ A+ WH C +C C LAD G
Sbjct: 25 VIKAMQANWHPDCFRCEICNDCLADTG 51
>SB_26947| Best HMM Match : LIM (HMM E-Value=6.2e-32)
Length = 648
Score = 32.3 bits (70), Expect = 0.41
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTI 698
WH C CT C + L D+ +++K + C + CA C + I
Sbjct: 103 WHASCFICTTCKELLVDL--IYFYKDSKVYCGRHHAETL--KPRCAACDEII 150
>SB_59754| Best HMM Match : rve (HMM E-Value=8e-19)
Length = 1065
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -2
Query: 403 AASSLRVPVVVR-VHAQRARCQLDGWSGNRSHRPPRLHALKALSFGVS*PWSRPG 242
A+SS+ P++ + + A RCQ HRP R L ALSF + PWSR G
Sbjct: 624 ASSSVWWPLITKQIEAMVNRCQTCA-----KHRPERREPLMALSF-PNLPWSRVG 672
>SB_20707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 29.9 bits (64), Expect = 2.2
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 543 WHHGCLKCTCCGQAL 587
WH GC KC CG L
Sbjct: 213 WHKGCFKCESCGMTL 227
>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1646
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = +3
Query: 504 NRERFLLHAL----DRYWHHGCLKCTCCGQALADMGRSFY 611
+R RF H L + YWHHG + C + GRS Y
Sbjct: 96 HRARFAYHGLAAQYNSYWHHGLILDDCNEENWVQNGRSCY 135
>SB_31367| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/78 (25%), Positives = 37/78 (47%)
Frame = +1
Query: 388 GVSSPHPSSPEASFAANGHDYPHNNNNPALKECAGCGGKIARGSSFTP*TDTGITAA*NA 567
GV S SP+ F +G + P +N+ + + R SS +P +++ N+
Sbjct: 23 GVQSKSEHSPQGPFGKSGREGPGGSNSCSPGDPLVLERPPPRWSSNSPYSESYY----NS 78
Query: 568 HAAVKPSRTWEDPSISRV 621
A V R WE+P ++++
Sbjct: 79 LAVVLQRRDWENPGVTQL 96
>SB_53246| Best HMM Match : AMP-binding (HMM E-Value=7.8e-37)
Length = 497
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 263 LAVVQAWCFEGCPAG 219
LA ++AWC E CP G
Sbjct: 441 LAEIEAWCLEQCPPG 455
>SB_16214| Best HMM Match : AMP-binding (HMM E-Value=0)
Length = 549
Score = 27.9 bits (59), Expect = 8.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 263 LAVVQAWCFEGCPAG 219
LA ++AWC E CP G
Sbjct: 493 LAEIEAWCLEQCPPG 507
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,668,520
Number of Sequences: 59808
Number of extensions: 470645
Number of successful extensions: 3262
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 3075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3249
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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