BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= e96h0229 (728 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 45 5e-05 X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 45 5e-05 U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 43 3e-04 U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 38 0.006 U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 38 0.006 AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 38 0.006 AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 38 0.006 U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily ass... 37 0.013 U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily ass... 37 0.013 Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 36 0.022 L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 36 0.022 Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 36 0.030 U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 36 0.030 M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 36 0.030 AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 36 0.030 Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 35 0.068 Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 35 0.068 Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 35 0.068 Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 35 0.068 Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 35 0.068 Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 35 0.068 Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 35 0.068 Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 35 0.068 Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical p... 35 0.068 L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical pr... 35 0.068 EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 35 0.068 Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical pr... 33 0.16 U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transc... 33 0.16 Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 32 0.37 Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 32 0.37 AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 32 0.37 AL021177-2|CAA15978.1| 192|Caenorhabditis elegans Hypothetical ... 31 0.84 Z81082-4|CAB03096.1| 176|Caenorhabditis elegans Hypothetical pr... 29 2.6 Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical pr... 29 2.6 Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 29 2.6 Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 29 2.6 U72347-1|AAD12189.1| 101|Caenorhabditis elegans putative transc... 29 2.6 U58749-7|AAK18878.1| 84|Caenorhabditis elegans Hypothetical pr... 29 2.6 AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 2.6 AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 2.6 AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.6 AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 29 2.6 U80955-2|AAM97946.1| 181|Caenorhabditis elegans Mlp/crp family ... 29 3.4 AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical ... 28 5.9 Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 28 7.9 Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 28 7.9 Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 28 7.9 Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 28 7.9 Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 28 7.9 Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 28 7.9 U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 28 7.9 U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 28 7.9 U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 28 7.9 AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 28 7.9 AF003144-4|AAB54197.2| 164|Caenorhabditis elegans Hypothetical ... 28 7.9 >Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical protein ZC247.3 protein. Length = 405 Score = 45.2 bits (102), Expect = 5e-05 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +3 Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 +R++ L + WH CL+C C A M + + + G+ILCK D++R + CA C Sbjct: 77 DRYVFTVLGKCWHQSCLRCCDCR---APMSMTCFSRDGLILCKTDFSRRY--SQRCAGC 130 >X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein protein. Length = 382 Score = 45.2 bits (102), Expect = 5e-05 Identities = 20/59 (33%), Positives = 32/59 (54%) Frame = +3 Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 +R++ L + WH CL+C C A M + + + G+ILCK D++R + CA C Sbjct: 54 DRYVFTVLGKCWHQSCLRCCDCR---APMSMTCFSRDGLILCKTDFSRRY--SQRCAGC 107 >U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family protein 6 protein. Length = 287 Score = 42.7 bits (96), Expect = 3e-04 Identities = 16/60 (26%), Positives = 34/60 (56%) Frame = +3 Query: 507 RERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 ++R++ ++ +H CL+C+CC +L+ + F + G I C++D+ ++ G C C Sbjct: 27 KDRYIYRVMEDSYHESCLRCSCCQLSLSSFKKCF-SRHGNIYCEHDHQMLY--GKRCRRC 83 Score = 32.3 bits (70), Expect = 0.37 Identities = 12/36 (33%), Positives = 19/36 (52%) Frame = +3 Query: 540 YWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647 Y+H C C C Q ++G ++ G + C+NDY Sbjct: 100 YYHAQCFSCCSC-QRPFNLGDEYHVFDGEVFCRNDY 134 >U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. Length = 452 Score = 38.3 bits (85), Expect = 0.006 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 +H CLKC C + L D ++ + K G C++DY R+F + C+ C Sbjct: 77 FHAQCLKCVQCSRPL-DENQTAFVKNGQTYCRDDYRRLF--TTRCSRC 121 >U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated protein 97 protein. Length = 348 Score = 38.3 bits (85), Expect = 0.006 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 ++ A++ WH GC C C + LAD+G F G LC+ R +G +C Sbjct: 93 VIKAMNASWHPGCFCCEICNKQLADVG--FLRNAGRALCRECNEREKAAGHGRYVC 146 >AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain family protein 7 protein. Length = 452 Score = 38.3 bits (85), Expect = 0.006 Identities = 17/48 (35%), Positives = 27/48 (56%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 +H CLKC C + L D ++ + K G C++DY R+F + C+ C Sbjct: 77 FHAQCLKCVQCSRPL-DENQTAFVKNGQTYCRDDYRRLF--TTRCSRC 121 >AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. Length = 348 Score = 38.3 bits (85), Expect = 0.006 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 ++ A++ WH GC C C + LAD+G F G LC+ R +G +C Sbjct: 93 VIKAMNASWHPGCFCCEICNKQLADVG--FLRNAGRALCRECNEREKAAGHGRYVC 146 >U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily assigned gene nameprotein 327, isoform a protein. Length = 256 Score = 37.1 bits (82), Expect = 0.013 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +3 Query: 531 LDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXN 707 +++ +H C C C Q + G F+ K G CK D+ R+F C C Q I N Sbjct: 93 MNKNFHIECFTCAECNQPFGEDG--FHEKNGQTYCKRDFFRLF--APKCNGCSQPITSN 147 Score = 36.7 bits (81), Expect = 0.017 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +3 Query: 528 ALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 AL +WH C C CG ++ G SF+ G LC+ Y GS C+ C Sbjct: 151 ALGTHWHPDCFVCQHCG--VSFNGASFFEHNGAPLCERHYHE--SRGSICSQC 199 >U20861-5|AAT92079.1| 256|Caenorhabditis elegans Temporarily assigned gene nameprotein 327, isoform b protein. Length = 256 Score = 37.1 bits (82), Expect = 0.013 Identities = 19/59 (32%), Positives = 27/59 (45%) Frame = +3 Query: 531 LDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXN 707 +++ +H C C C Q + G F+ K G CK D+ R+F C C Q I N Sbjct: 163 MNKNFHIECFTCAECNQPFGEDG--FHEKNGQTYCKRDFFRLF--APKCNGCSQPITSN 217 >Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical protein F01D4.6a protein. Length = 321 Score = 36.3 bits (80), Expect = 0.022 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +3 Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 +R++ +R +H C+KCT C LA+ ++K G I C Y + S CA C Sbjct: 38 DRYIYRMDNRSYHENCVKCTICESPLAE---KCFWKNGRIYCSQHYYKDH-SIHRCAGC 92 >L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein protein. Length = 321 Score = 36.3 bits (80), Expect = 0.022 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +3 Query: 510 ERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 +R++ +R +H C+KCT C LA+ ++K G I C Y + S CA C Sbjct: 38 DRYIYRMDNRSYHENCVKCTICESPLAE---KCFWKNGRIYCSQHYYKDH-SIHRCAGC 92 >Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical protein F01D4.6b protein. Length = 313 Score = 35.9 bits (79), Expect = 0.030 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 501 ENRERFLLHALD-RYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSAC 677 +N E + +D R +H C+KCT C LA+ ++K G I C Y + S C Sbjct: 26 KNSETIIYFQMDNRSYHENCVKCTICESPLAE---KCFWKNGRIYCSQHYYKDH-SIHRC 81 Query: 678 ALC 686 A C Sbjct: 82 AGC 84 >U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox protein 14 protein. Length = 351 Score = 35.9 bits (79), Expect = 0.030 Identities = 16/64 (25%), Positives = 33/64 (51%) Frame = +3 Query: 507 RERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 R+RF+ R +H CL+C+ C ++G + + + + C+ + + F G+ C+ C Sbjct: 56 RDRFVSKVNGRCYHSSCLRCSTCKD---ELGATCFLREDSMYCRAHFYKKF--GTKCSSC 110 Query: 687 GQTI 698 + I Sbjct: 111 NEGI 114 >M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.elegans mec-3 geneencoding differentiation of the six touch receptor neurons,complete cds. ). Length = 313 Score = 35.9 bits (79), Expect = 0.030 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 501 ENRERFLLHALD-RYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSAC 677 +N E + +D R +H C+KCT C LA+ ++K G I C Y + S C Sbjct: 26 KNSETIIYFQMDNRSYHENCVKCTICESPLAE---KCFWKNGRIYCSQHYYKDH-SIHRC 81 Query: 678 ALC 686 A C Sbjct: 82 AGC 84 >AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox protein CEH-14 protein. Length = 351 Score = 35.9 bits (79), Expect = 0.030 Identities = 16/64 (25%), Positives = 33/64 (51%) Frame = +3 Query: 507 RERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALC 686 R+RF+ R +H CL+C+ C ++G + + + + C+ + + F G+ C+ C Sbjct: 56 RDRFVSKVNGRCYHSSCLRCSTCKD---ELGATCFLREDSMYCRAHFYKKF--GTKCSSC 110 Query: 687 GQTI 698 + I Sbjct: 111 NEGI 114 >Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical protein F25H5.1b protein. Length = 587 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 274 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 326 >Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical protein F25H5.1a protein. Length = 624 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 311 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 363 >Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical protein F25H5.1f protein. Length = 691 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 311 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 363 Score = 33.1 bits (72), Expect = 0.21 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 534 DRYWHHGCLKCTCCGQALADMGRSFYFKGGMILC 635 DR+WH+ C C C +L +G+ F G ILC Sbjct: 612 DRHWHNDCFICAQCTTSL--VGKGFITDGHEILC 643 >Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical protein F25H5.1c protein. Length = 532 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 219 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 271 >Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical protein F25H5.1b protein. Length = 587 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 274 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 326 >Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical protein F25H5.1a protein. Length = 624 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 311 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 363 >Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical protein F25H5.1f protein. Length = 691 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 311 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 363 Score = 33.1 bits (72), Expect = 0.21 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 534 DRYWHHGCLKCTCCGQALADMGRSFYFKGGMILC 635 DR+WH+ C C C +L +G+ F G ILC Sbjct: 612 DRHWHNDCFICAQCTTSL--VGKGFITDGHEILC 643 >Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical protein F25H5.1c protein. Length = 532 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 219 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 271 >Z81068-11|CAB02981.1| 454|Caenorhabditis elegans Hypothetical protein F25H5.1e protein. Length = 454 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 141 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 193 >L08403-3|AAT92076.1| 335|Caenorhabditis elegans Hypothetical protein F42H10.3 protein. Length = 335 Score = 34.7 bits (76), Expect = 0.068 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +3 Query: 522 LHALDRYWHHGCLKCTCCGQAL 587 L LD+ WH C KCT CG L Sbjct: 20 LKCLDKVWHKQCFKCTVCGMTL 41 >EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform protein. Length = 656 Score = 34.7 bits (76), Expect = 0.068 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXNEF 713 WH C C C Q L D+ ++ K I C+ Y + C+ C + I E+ Sbjct: 311 WHPACFTCQACEQLLVDL--TYCVKDNQIYCERHYAEL--HKPRCSACDELIFAGEY 363 Score = 33.1 bits (72), Expect = 0.21 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +3 Query: 534 DRYWHHGCLKCTCCGQALADMGRSFYFKGGMILC 635 DR+WH+ C C C +L +G+ F G ILC Sbjct: 612 DRHWHNDCFICAQCTTSL--VGKGFITDGHEILC 643 >Z81482-5|CAB03956.3| 409|Caenorhabditis elegans Hypothetical protein C40H5.5 protein. Length = 409 Score = 33.5 bits (73), Expect = 0.16 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 537 RYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXN 707 +Y+H+ CL+C C + Y + G+ LC+ D+ + + C C IP N Sbjct: 128 KYYHNNCLRCQMCDIPF-EYSDKCYVRDGVFLCRADHAKRY--QKCCRKC--EIPLN 179 Score = 29.5 bits (63), Expect = 2.6 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 Query: 504 NRERFLLHALDRYWHHGCLKCTCCG 578 NRE ++ A + +HH C C CG Sbjct: 179 NREDMVMKAKEMIFHHACFVCFICG 203 >U72211-1|AAB97099.1| 409|Caenorhabditis elegans putative transcription factor TTX-3 protein. Length = 409 Score = 33.5 bits (73), Expect = 0.16 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +3 Query: 537 RYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFGSGSACALCGQTIPXN 707 +Y+H+ CL+C C + Y + G+ LC+ D+ + + C C IP N Sbjct: 128 KYYHNNCLRCQMCDIPF-EYSDKCYVRDGVFLCRADHAKRY--QKCCRKC--EIPLN 179 Score = 29.5 bits (63), Expect = 2.6 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +3 Query: 504 NRERFLLHALDRYWHHGCLKCTCCG 578 NRE ++ A + +HH C C CG Sbjct: 179 NREDMVMKAKEMIFHHACFVCFICG 203 >Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical protein F09B9.2b protein. Length = 639 Score = 32.3 bits (70), Expect = 0.37 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFY-FKGGMILCKNDY 647 +L A D+Y+H C +C CG+ L + G FY LC +D+ Sbjct: 30 VLKANDKYFHINCFQCKKCGRNLGETG--FYTTPENAYLCPDDF 71 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFG 662 +L AL WH C KC+ C L S + G LC DY FG Sbjct: 143 VLLALGLSWHVYCFKCSECSAVLHGEYMSHH---GKPLCLRDYNEKFG 187 >Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical protein F09B9.2a protein. Length = 625 Score = 32.3 bits (70), Expect = 0.37 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFY-FKGGMILCKNDY 647 +L A D+Y+H C +C CG+ L + G FY LC +D+ Sbjct: 16 VLKANDKYFHINCFQCKKCGRNLGETG--FYTTPENAYLCPDDF 57 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFG 662 +L AL WH C KC+ C L S + G LC DY FG Sbjct: 129 VLLALGLSWHVYCFKCSECSAVLHGEYMSHH---GKPLCLRDYNEKFG 173 >AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative actin-binding proteinUNC-115 protein. Length = 639 Score = 32.3 bits (70), Expect = 0.37 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFY-FKGGMILCKNDY 647 +L A D+Y+H C +C CG+ L + G FY LC +D+ Sbjct: 30 VLKANDKYFHINCFQCKKCGRNLGETG--FYTTPENAYLCPDDF 71 Score = 31.5 bits (68), Expect = 0.64 Identities = 18/48 (37%), Positives = 21/48 (43%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFG 662 +L AL WH C KC+ C L S + G LC DY FG Sbjct: 143 VLLALGLSWHVYCFKCSECSAVLHGEYMSHH---GKPLCLRDYNEKFG 187 >AL021177-2|CAA15978.1| 192|Caenorhabditis elegans Hypothetical protein Y1A5A.1 protein. Length = 192 Score = 31.1 bits (67), Expect = 0.84 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = +3 Query: 522 LHALDRYWHHGCLKCTCCGQAL 587 L ALDR+WH C C+ C + L Sbjct: 137 LLALDRHWHPRCFTCSSCNRPL 158 >Z81082-4|CAB03096.1| 176|Caenorhabditis elegans Hypothetical protein F42G4.3b protein. Length = 176 Score = 29.5 bits (63), Expect = 2.6 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 507 RERFLLHALDRYWHHGCLKCTCCGQALADM--GRSFYFKGGMILCK 638 +E + A+D+ +H C KC CG L+ G+ Y +LCK Sbjct: 118 KESVRVVAMDKSFHVDCYKCEDCGMQLSSKLEGQGCYPIDNHLLCK 163 >Z81082-3|CAB03095.2| 603|Caenorhabditis elegans Hypothetical protein F42G4.3a protein. Length = 603 Score = 29.5 bits (63), Expect = 2.6 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%) Frame = +3 Query: 507 RERFLLHALDRYWHHGCLKCTCCGQALADM--GRSFYFKGGMILCK 638 +E + A+D+ +H C KC CG L+ G+ Y +LCK Sbjct: 545 KESVRVVAMDKSFHVDCYKCEDCGMQLSSKLEGQGCYPIDNHLLCK 590 >Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein K08C7.3b protein. Length = 3672 Score = 29.5 bits (63), Expect = 2.6 Identities = 26/73 (35%), Positives = 30/73 (41%) Frame = +3 Query: 468 PGAKGMRGLWWENRERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647 PGA GMR E+ E H Y HGC KC C +A MG + G C+ Sbjct: 2059 PGATGMR---CEHCE----HGYWNYGEHGCDKCDC--EADLSMGTVCDVRTGQCHCQEGA 2109 Query: 648 TRMFGSGSACALC 686 T GS C C Sbjct: 2110 T-----GSRCDQC 2117 >Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein K08C7.3a protein. Length = 3704 Score = 29.5 bits (63), Expect = 2.6 Identities = 26/73 (35%), Positives = 30/73 (41%) Frame = +3 Query: 468 PGAKGMRGLWWENRERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647 PGA GMR E+ E H Y HGC KC C +A MG + G C+ Sbjct: 2059 PGATGMR---CEHCE----HGYWNYGEHGCDKCDC--EADLSMGTVCDVRTGQCHCQEGA 2109 Query: 648 TRMFGSGSACALC 686 T GS C C Sbjct: 2110 T-----GSRCDQC 2117 >U72347-1|AAD12189.1| 101|Caenorhabditis elegans putative transcription factor LIM-6 protein. Length = 101 Score = 29.5 bits (63), Expect = 2.6 Identities = 11/35 (31%), Positives = 18/35 (51%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647 +H C C C Q ++G ++ G + C+NDY Sbjct: 1 YHAQCFSCCSC-QRPFNLGDEYHVFDGEVFCRNDY 34 >U58749-7|AAK18878.1| 84|Caenorhabditis elegans Hypothetical protein B0496.7 protein. Length = 84 Score = 29.5 bits (63), Expect = 2.6 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = +3 Query: 528 ALDRYWHHGCLKCT--CCGQALADMGRSFYFKGGMILCKNDYTRMFG 662 +L + WH CLKC CG+ L+ S + G C Y +FG Sbjct: 19 SLGKDWHRPCLKCANKACGKTLSAGSHSEH--EGKPYCNRCYGALFG 63 >AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical protein Y64G10A.7 protein. Length = 1651 Score = 29.5 bits (63), Expect = 2.6 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -3 Query: 636 CIISSHP*NRRIFPCPRGLDRSMCILGSRDASICLGREGGTSRDFPTT 493 C+ S H N ++ CP G + C DA+ C+ GG + T Sbjct: 90 CVPSEHNDNEQVCECPVGFTGAKC---QYDANECMANNGGCEHECVNT 134 >AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical protein Y64G10A.7 protein. Length = 1651 Score = 29.5 bits (63), Expect = 2.6 Identities = 14/48 (29%), Positives = 21/48 (43%) Frame = -3 Query: 636 CIISSHP*NRRIFPCPRGLDRSMCILGSRDASICLGREGGTSRDFPTT 493 C+ S H N ++ CP G + C DA+ C+ GG + T Sbjct: 90 CVPSEHNDNEQVCECPVGFTGAKC---QYDANECMANNGGCEHECVNT 134 >AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha chain protein. Length = 3704 Score = 29.5 bits (63), Expect = 2.6 Identities = 26/73 (35%), Positives = 30/73 (41%) Frame = +3 Query: 468 PGAKGMRGLWWENRERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647 PGA GMR E+ E H Y HGC KC C +A MG + G C+ Sbjct: 2059 PGATGMR---CEHCE----HGYWNYGEHGCDKCDC--EADLSMGTVCDVRTGQCHCQEGA 2109 Query: 648 TRMFGSGSACALC 686 T GS C C Sbjct: 2110 T-----GSRCDQC 2117 >AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha protein. Length = 3704 Score = 29.5 bits (63), Expect = 2.6 Identities = 26/73 (35%), Positives = 30/73 (41%) Frame = +3 Query: 468 PGAKGMRGLWWENRERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDY 647 PGA GMR E+ E H Y HGC KC C +A MG + G C+ Sbjct: 2059 PGATGMR---CEHCE----HGYWNYGEHGCDKCDC--EADLSMGTVCDVRTGQCHCQEGA 2109 Query: 648 TRMFGSGSACALC 686 T GS C C Sbjct: 2110 T-----GSRCDQC 2117 >U80955-2|AAM97946.1| 181|Caenorhabditis elegans Mlp/crp family (muscle lim protein/cysteine-rich protein) protein 1, isoform c protein. Length = 181 Score = 29.1 bits (62), Expect = 3.4 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = +3 Query: 543 WHHGCLKCTCCGQALADMGRSFYFKGGMILCKNDYTRMFG 662 WH C KC+ C + L M S + CK + R +G Sbjct: 31 WHKFCFKCSMCNKLLDSM--SCCEHQAQLFCKQCHCRRYG 68 >AL021480-3|CAA16328.1| 410|Caenorhabditis elegans Hypothetical protein Y39E4A.2b protein. Length = 410 Score = 28.3 bits (60), Expect = 5.9 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 424 SFAANGHDYPHNNNNPALKECAGCGG 501 S +GH + HNN++ + +C+G GG Sbjct: 60 SHGGHGHSHTHNNDDSS-SDCSGAGG 84 >Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical protein T11B7.4e protein. Length = 684 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein T11B7.4d protein. Length = 1424 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical protein T11B7.4c protein. Length = 771 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 160 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 189 >Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical protein T11B7.4b protein. Length = 645 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical protein T11B7.4a protein. Length = 425 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical protein T11B7.4e protein. Length = 684 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical protein T11B7.4d protein. Length = 1424 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical protein T11B7.4c protein. Length = 771 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 160 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 189 >Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical protein T11B7.4b protein. Length = 645 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical protein T11B7.4a protein. Length = 425 Score = 27.9 bits (59), Expect = 7.9 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = +3 Query: 519 LLHALDRYWHHGCLKCTCCGQALADMGRSF 608 + A + H CL C CG +L ++G F Sbjct: 231 MARAAGKNLHGDCLSCATCGNSLRNVGHHF 260 >Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical protein K02C4.4 protein. Length = 723 Score = 27.9 bits (59), Expect = 7.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 540 YWHHGCLKCTCCGQALA 590 ++H GC KC CG LA Sbjct: 28 FFHQGCFKCYICGTRLA 44 >U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 5, isoform b protein. Length = 849 Score = 27.9 bits (59), Expect = 7.9 Identities = 24/85 (28%), Positives = 34/85 (40%) Frame = +1 Query: 367 PALPRVRGVSSPHPSSPEASFAANGHDYPHNNNNPALKECAGCGGKIARGSSFTP*TDTG 546 PALP HPSS F N H + H +N G SF P T T Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNVQVQNHYFGAPPPGL--ESFGP-TRTS 182 Query: 547 ITAA*NAHAAVKPSRTWEDPSISRV 621 T++ + A+ P+ +W +S + Sbjct: 183 STSSSQIYDAI-PNPSWNYTGLSNI 206 >U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 5, isoform d protein. Length = 868 Score = 27.9 bits (59), Expect = 7.9 Identities = 24/85 (28%), Positives = 34/85 (40%) Frame = +1 Query: 367 PALPRVRGVSSPHPSSPEASFAANGHDYPHNNNNPALKECAGCGGKIARGSSFTP*TDTG 546 PALP HPSS F N H + H +N G SF P T T Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNVQVQNHYFGAPPPGL--ESFGP-TRTS 182 Query: 547 ITAA*NAHAAVKPSRTWEDPSISRV 621 T++ + A+ P+ +W +S + Sbjct: 183 STSSSQIYDAI-PNPSWNYTGLSNI 206 >U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (prokaryotic heat shockprotein) protein 5, isoform a protein. Length = 915 Score = 27.9 bits (59), Expect = 7.9 Identities = 24/85 (28%), Positives = 34/85 (40%) Frame = +1 Query: 367 PALPRVRGVSSPHPSSPEASFAANGHDYPHNNNNPALKECAGCGGKIARGSSFTP*TDTG 546 PALP HPSS F N H + H +N G SF P T T Sbjct: 126 PALPSTPSRVPHHPSSQVHHFHHNLHHHTHTHNVQVQNHYFGAPPPGL--ESFGP-TRTS 182 Query: 547 ITAA*NAHAAVKPSRTWEDPSISRV 621 T++ + A+ P+ +W +S + Sbjct: 183 STSSSQIYDAI-PNPSWNYTGLSNI 206 >AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and transglutaminase domainprotein protein. Length = 723 Score = 27.9 bits (59), Expect = 7.9 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = +3 Query: 540 YWHHGCLKCTCCGQALA 590 ++H GC KC CG LA Sbjct: 28 FFHQGCFKCYICGTRLA 44 >AF003144-4|AAB54197.2| 164|Caenorhabditis elegans Hypothetical protein C55C2.1 protein. Length = 164 Score = 27.9 bits (59), Expect = 7.9 Identities = 13/37 (35%), Positives = 19/37 (51%) Frame = +1 Query: 403 HPSSPEASFAANGHDYPHNNNNPALKECAGCGGKIAR 513 HP + S A HD N+ NP + +C CG + +R Sbjct: 32 HPVAHRGSSAC--HDPKSNDGNPRVCQCKVCGKRFSR 66 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,248,084 Number of Sequences: 27780 Number of extensions: 323148 Number of successful extensions: 919 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 868 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 916 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1718929214 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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