Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0228
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical pr...    32   0.43 
Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical pr...    32   0.43 
U23454-2|AAC46519.2|  368|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z68315-5|CAE48501.1|  689|Caenorhabditis elegans Hypothetical
           protein F28C6.4b protein.
          Length = 689

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
 Frame = +1

Query: 178 AISPSSV*FDLNDYY-SYIHTIMNQYTLFLVCKCCLFSF--IRTEKHLCVYIAIKIFYES 348
           ++ P S+  D  D+  + ++TI+N+Y + ++  C LF     +  K   +   +  F   
Sbjct: 502 SLLPPSIFSDTLDFQPNNLNTILNEYPIIVILTCSLFWMYGYKQSKFHIILPMVSHFLRL 561

Query: 349 FEY*IFKEAI--FVSYQINIFKYSFGYVHIPNCFYALSLLKRISE 477
           FE   F E +  F+   I    YS G V +  C   L  +  +S+
Sbjct: 562 FELTQFNEVLMHFIRLSILPISYSTGSV-LAGCLPLLLAIVPVSQ 605


>Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical
           protein F28C6.4a protein.
          Length = 745

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
 Frame = +1

Query: 178 AISPSSV*FDLNDYY-SYIHTIMNQYTLFLVCKCCLFSF--IRTEKHLCVYIAIKIFYES 348
           ++ P S+  D  D+  + ++TI+N+Y + ++  C LF     +  K   +   +  F   
Sbjct: 502 SLLPPSIFSDTLDFQPNNLNTILNEYPIIVILTCSLFWMYGYKQSKFHIILPMVSHFLRL 561

Query: 349 FEY*IFKEAI--FVSYQINIFKYSFGYVHIPNCFYALSLLKRISE 477
           FE   F E +  F+   I    YS G V +  C   L  +  +S+
Sbjct: 562 FELTQFNEVLMHFIRLSILPISYSTGSV-LAGCLPLLLAIVPVSQ 605


>U23454-2|AAC46519.2|  368|Caenorhabditis elegans Hypothetical
           protein C10A4.5 protein.
          Length = 368

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +3

Query: 399 YIQIFFWLCTHSQLFLCLVTIKKNIRIELSNSHKVLLILNIIWKCLDTINF 551
           Y+ I  WL   S + + L  +KK      +N + +++ LN ++      NF
Sbjct: 65  YLSIIVWLTIASMILVTLTFLKKFCTSTAANYNMIVMFLNFVFNVAIMRNF 115


>Z49068-7|CAA88859.1|  552|Caenorhabditis elegans Hypothetical
           protein K01C8.8 protein.
          Length = 552

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 402 IQIFFWLCTHSQLFLCLVTIKKNIRIELSNSHKVLL 509
           + I FW     Q+ L L    K I+IE  N H +L+
Sbjct: 334 VAIVFWNKKLKQIILKLTLTSKRIKIEAPNEHGLLV 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,764,606
Number of Sequences: 27780
Number of extensions: 307119
Number of successful extensions: 748
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)