Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0227
(774 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription fac... 116 1e-25
BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein. 116 1e-25
BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein. 116 1e-25
AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription fac... 116 1e-25
AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription fac... 116 1e-25
AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens ... 116 1e-25
X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3... 107 4e-23
X53281-1|CAA37376.1| 162|Homo sapiens general transcription fac... 107 4e-23
X53280-1|CAA37375.1| 206|Homo sapiens general transcription fac... 107 4e-23
BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription fac... 107 4e-23
BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription fac... 107 4e-23
AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BT... 107 4e-23
M90357-1|AAA58398.1| 158|Homo sapiens basic transcription facto... 99 2e-20
M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein. 97 6e-20
BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein. 78 4e-14
M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein. 75 4e-13
>BC070378-1|AAH70378.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 116 bits (278), Expect = 1e-25
Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L
Sbjct: 54 IEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSL 113
Query: 182 KRIASSV-------AAPKPL---EEDDEVPNLV 250
+++A APKP EEDD+VP+LV
Sbjct: 114 RKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
>BC022371-1|AAH22371.1| 158|Homo sapiens BTF3L4 protein protein.
Length = 158
Score = 116 bits (278), Expect = 1e-25
Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L
Sbjct: 54 IEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSL 113
Query: 182 KRIASSV-------AAPKPL---EEDDEVPNLV 250
+++A APKP EEDD+VP+LV
Sbjct: 114 RKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
>BC021004-1|AAH21004.1| 153|Homo sapiens BTF3L4 protein protein.
Length = 153
Score = 116 bits (278), Expect = 1e-25
Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L
Sbjct: 49 IEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSL 108
Query: 182 KRIASSV-------AAPKPL---EEDDEVPNLV 250
+++A APKP EEDD+VP+LV
Sbjct: 109 RKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 141
>AL445685-6|CAI17032.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 116 bits (278), Expect = 1e-25
Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L
Sbjct: 54 IEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSL 113
Query: 182 KRIASSV-------AAPKPL---EEDDEVPNLV 250
+++A APKP EEDD+VP+LV
Sbjct: 114 RKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
>AL139156-5|CAI22856.1| 158|Homo sapiens basic transcription factor
3-like 4 protein.
Length = 158
Score = 116 bits (278), Expect = 1e-25
Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L
Sbjct: 54 IEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSL 113
Query: 182 KRIASSV-------AAPKPL---EEDDEVPNLV 250
+++A APKP EEDD+VP+LV
Sbjct: 114 RKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
>AK027750-1|BAB55342.1| 158|Homo sapiens protein ( Homo sapiens
cDNA FLJ14844 fis, clone PLACE1000133, highly similar to
TRANSCRIPTION FACTOR BTF3. ).
Length = 158
Score = 116 bits (278), Expect = 1e-25
Identities = 62/93 (66%), Positives = 69/93 (74%), Gaps = 10/93 (10%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNMIK+DGTVIHFNNPK QASL+ANTFAITGH E K TEMLPGILSQLG D L L
Sbjct: 54 IEEVNMIKDDGTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSL 113
Query: 182 KRIASSV-------AAPKPL---EEDDEVPNLV 250
+++A APKP EEDD+VP+LV
Sbjct: 114 RKLAEQFPRQVLDSKAPKPEDIDEEDDDVPDLV 146
>X74070-1|CAA52200.1| 162|Homo sapiens transcription factor BTF3
protein.
Length = 162
Score = 107 bits (257), Expect = 4e-23
Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L
Sbjct: 59 IEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL 118
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNLV 250
+R+A SV PL ++DDEVP+LV
Sbjct: 119 RRLAEALPKQSVDGKAPLATGEDDDDEVPDLV 150
>X53281-1|CAA37376.1| 162|Homo sapiens general transcription factor
protein.
Length = 162
Score = 107 bits (257), Expect = 4e-23
Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L
Sbjct: 59 IEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL 118
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNLV 250
+R+A SV PL ++DDEVP+LV
Sbjct: 119 RRLAEALPKQSVDGKAPLATGEDDDDEVPDLV 150
>X53280-1|CAA37375.1| 206|Homo sapiens general transcription factor
protein.
Length = 206
Score = 107 bits (257), Expect = 4e-23
Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L
Sbjct: 103 IEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL 162
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNLV 250
+R+A SV PL ++DDEVP+LV
Sbjct: 163 RRLAEALPKQSVDGKAPLATGEDDDDEVPDLV 194
>BT007120-1|AAP35784.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 107 bits (257), Expect = 4e-23
Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L
Sbjct: 59 IEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL 118
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNLV 250
+R+A SV PL ++DDEVP+LV
Sbjct: 119 RRLAEALPKQSVDGKAPLATGEDDDDEVPDLV 150
>BC008062-1|AAH08062.1| 162|Homo sapiens basic transcription factor
3 protein.
Length = 162
Score = 107 bits (257), Expect = 4e-23
Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L
Sbjct: 59 IEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL 118
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNLV 250
+R+A SV PL ++DDEVP+LV
Sbjct: 119 RRLAEALPKQSVDGKAPLATGEDDDDEVPDLV 150
>AB062126-1|BAB93458.1| 162|Homo sapiens transcription factor BTF 3
protein.
Length = 162
Score = 107 bits (257), Expect = 4e-23
Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 9/92 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IEEVNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L
Sbjct: 59 IEEVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSL 118
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNLV 250
+R+A SV PL ++DDEVP+LV
Sbjct: 119 RRLAEALPKQSVDGKAPLATGEDDDDEVPDLV 150
>M90357-1|AAA58398.1| 158|Homo sapiens basic transcription factor
3a protein.
Length = 158
Score = 98.7 bits (235), Expect = 2e-20
Identities = 53/87 (60%), Positives = 59/87 (67%), Gaps = 9/87 (10%)
Frame = +2
Query: 8 EVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKR 187
+VNM GTVIHFNNPK QASLAANTF ITGH E KQ TEMLP IL+QLG D L L+R
Sbjct: 67 KVNMFTNQGTVIHFNNPKVQASLAANTFTITGHAETKQLTEMLPSILNQLGADSLTSLRR 126
Query: 188 IA-----SSVAAPKPL----EEDDEVP 241
+A SV PL ++DDEVP
Sbjct: 127 LAEALPKQSVDGKAPLATGEDDDDEVP 153
>M90356-1|AAA58401.1| 214|Homo sapiens BTF3 homologue protein.
Length = 214
Score = 97.1 bits (231), Expect = 6e-20
Identities = 53/91 (58%), Positives = 59/91 (64%), Gaps = 9/91 (9%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRL 181
IE+VNM GTVIHFNNPK QASLA NTF ITGH E KQ TEMLP +LSQLG D L L
Sbjct: 89 IEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSL 148
Query: 182 KRIA-----SSVAAPKPL----EEDDEVPNL 247
+R+A V PL ++DD VP L
Sbjct: 149 RRLAEVLPKQPVDGKAPLATGGDDDDGVPEL 179
>BC062736-1|AAH62736.1| 102|Homo sapiens LOC503543 protein protein.
Length = 102
Score = 77.8 bits (183), Expect = 4e-14
Identities = 44/90 (48%), Positives = 55/90 (61%), Gaps = 10/90 (11%)
Frame = +2
Query: 11 VNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGILSQLGPDGLNRLKRI 190
+N K T+IHFNNP+ QA LA NTF ITGHGE KQ TEML +L+QL L L+R+
Sbjct: 1 MNQEKLQRTMIHFNNPEVQAFLAVNTFTITGHGETKQLTEMLRSVLNQLAAVSLTSLRRL 60
Query: 191 A-----SSVAAPKPL-----EEDDEVPNLV 250
A SV PL ++DDEVP ++
Sbjct: 61 AEALPKQSVDGKAPLATGEDDDDDEVPGIM 90
>M90354-1|AAA58400.1| 111|Homo sapiens BTF3 homologue protein.
Length = 111
Score = 74.5 bits (175), Expect = 4e-13
Identities = 35/48 (72%), Positives = 37/48 (77%)
Frame = +2
Query: 2 IEEVNMIKEDGTVIHFNNPKPQASLAANTFAITGHGENKQTTEMLPGI 145
IEEVNM GTVIHFNNP+ QASLAANTF +TGH E KQ TEML I
Sbjct: 55 IEEVNMFTHQGTVIHFNNPEVQASLAANTFTMTGHAETKQLTEMLLSI 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,597,353
Number of Sequences: 237096
Number of extensions: 2015965
Number of successful extensions: 9912
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9900
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -