Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0226
         (789 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   148   6e-38
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   148   6e-38
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   133   2e-33
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    24   1.2  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.1  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    23   3.7  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  148 bits (358), Expect = 6e-38
 Identities = 90/174 (51%), Positives = 109/174 (62%), Gaps = 4/174 (2%)
 Frame = +3

Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 435 FDNRMVNHFVQEFKRKYKKDLATNKELLGVCVLHVRGQRGPCHRPHKRALR*ILSLRVLT 614
           FDNR+V +  Q+FK+K+K D++ N   L      +R Q     R    A +  + +  L 
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRAL----RRLRTQCERAKRTLSSATQASIEIDSLF 116

Query: 615 STRQLLVLASRS-*TPICSGYHGA---SWRSLLRDAKIG*GXKFHDIVLVGGST 764
                    +R+    I   Y          +L+DAKIG     H+IVLVGGST
Sbjct: 117 DGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIG-KSAVHEIVLVGGST 169



 Score = 92.3 bits (219), Expect = 4e-21
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +2

Query: 509 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFR 670
           RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+
Sbjct: 86  RALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFK 139


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  148 bits (358), Expect = 6e-38
 Identities = 90/174 (51%), Positives = 109/174 (62%), Gaps = 4/174 (2%)
 Frame = +3

Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 435 FDNRMVNHFVQEFKRKYKKDLATNKELLGVCVLHVRGQRGPCHRPHKRALR*ILSLRVLT 614
           FDNR+V +  Q+FK+K+K D++ N   L      +R Q     R    A +  + +  L 
Sbjct: 61  FDNRLVEYCTQDFKKKHKADISGNPRAL----RRLRTQCERAKRTLSSATQASIEIDSLF 116

Query: 615 STRQLLVLASRS-*TPICSGYHGA---SWRSLLRDAKIG*GXKFHDIVLVGGST 764
                    +R+    I   Y          +L+DAKIG     H+IVLVGGST
Sbjct: 117 DGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIG-KSAVHEIVLVGGST 169



 Score = 92.3 bits (219), Expect = 4e-21
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = +2

Query: 509 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFR 670
           RALRRLRT CERAKRTLSS+TQASIEIDSLF+GID+ T+ITRARFE++N D F+
Sbjct: 86  RALRRLRTQCERAKRTLSSATQASIEIDSLFDGIDYSTTITRARFEDINMDYFK 139


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  133 bits (321), Expect = 2e-33
 Identities = 62/110 (56%), Positives = 84/110 (76%)
 Frame = +3

Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 435 FDNRMVNHFVQEFKRKYKKDLATNKELLGVCVLHVRGQRGPCHRPHKRAL 584
           FD +++++F++  K+K+KKD+  +K+ L      V   +      HK  L
Sbjct: 60  FDQKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTL 109



 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 28/66 (42%), Positives = 45/66 (68%)
 Frame = +2

Query: 470 VQEEIQKGPRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEE 649
           V+++ +K  R  ++AL++LR   E+AKR LSS  + ++ I++L    DF  ++TRA+FEE
Sbjct: 72  VKQKHKKDIRADKKALQKLRREVEKAKRDLSSVHKTTLTIENLLADYDFSETLTRAKFEE 131

Query: 650 LNADLF 667
           LN D F
Sbjct: 132 LNNDQF 137


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/85 (17%), Positives = 33/85 (38%)
 Frame = -2

Query: 461 KVVDHAIVKVLTSQVGVAGGGFHLEDTILDGKDGHVEGTAAEVKDKYISFSSTLFVKTVS 282
           K++   I KVL  +   +G  +           G + G   +++D Y +    +  K + 
Sbjct: 210 KLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIRDAYGNVKIPVLCKLIQ 269

Query: 281 NRSSSRFIDIRRTFKPEMVPASFVA 207
           +  +      ++ F  + +   FVA
Sbjct: 270 SIPTHLLDSEKKNFIVDHISNQFVA 294


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 646 GAERRSVQVTMEPVGEVFSVMPRLDKGSNSTILYWWVAP 762
           G++  S+ + ++ V EV   +  LDK   S  L  WVAP
Sbjct: 882 GSDDTSINMIVQEVPEVPYGLKVLDKSGRSVQLS-WVAP 919


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 28  DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 153
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 643  RGAERRSVQVTMEPVGEVFSVMPRLDKGSNS 735
            +GA+RR + + M   G+ FS+      G N+
Sbjct: 2054 KGADRRKLVMGMPMYGQSFSLADNNQNGLNA 2084


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
 Frame = +3

Query: 99  FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 224
           FH GA+  EG C+S    ++ N +   EC  +G  V+   ++T+ K CR
Sbjct: 15  FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,678
Number of Sequences: 336
Number of extensions: 4444
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)