Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0226
(789 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 157 7e-39
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 155 3e-38
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 5e-37
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 124 1e-28
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 90 2e-18
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 89 3e-18
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 52 7e-07
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.065
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 32 0.61
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 1.4
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 30 2.5
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 2.5
SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6) 29 3.2
SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06) 29 3.2
SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012) 29 4.3
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.7
SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85) 29 5.7
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_4985| Best HMM Match : NHL (HMM E-Value=4.7e-09) 28 7.5
SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 9.9
SB_23904| Best HMM Match : RdRP (HMM E-Value=0) 28 9.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 157 bits (382), Expect = 7e-39
Identities = 72/88 (81%), Positives = 81/88 (92%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
INEPTAAAIAYGLDKK ERNVLI+DLGGGTFDVS+LTIEDGIFEVKSTAGDTHLGGED
Sbjct: 173 INEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDGIFEVKSTAGDTHLGGED 232
Query: 435 FDNRMVNHFVQEFKRKYKKDLATNKELL 518
FDN+MV+HFV++FK+KYKKD+ NK +
Sbjct: 233 FDNKMVDHFVKQFKQKYKKDITPNKRAM 260
Score = 144 bits (348), Expect = 1e-34
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 4 HWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPA 183
HWPF V+ +G +PKI+V +KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPA
Sbjct: 89 HWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPA 148
Query: 184 YFNDSQRQATKDAGTISGLNVLRI 255
YF+DSQRQATKDAGTI+GLNVLRI
Sbjct: 149 YFHDSQRQATKDAGTIAGLNVLRI 172
Score = 107 bits (257), Expect = 1e-23
Identities = 53/75 (70%), Positives = 63/75 (84%)
Frame = +2
Query: 473 QEEIQKGPRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 652
+++ +K +RA+RRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL
Sbjct: 246 KQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 305
Query: 653 NADLFRLPWSQLEKS 697
N DLF+ +E++
Sbjct: 306 NQDLFKKTTEPVEQA 320
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/23 (65%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 699 LRDAKIG*GXK-FHDIVLVGGST 764
+RD+KI G + HDIVLVGGST
Sbjct: 321 IRDSKIPGGKESIHDIVLVGGST 343
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 155 bits (377), Expect = 3e-38
Identities = 72/89 (80%), Positives = 81/89 (91%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDG-IFEVKSTAGDTHLGGE 431
INEPTAAA+AYGLDK +GE+NVLIFDLGGGTFDVSILTI+DG +FEVKSTAGDTHLGGE
Sbjct: 173 INEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKSTAGDTHLGGE 232
Query: 432 DFDNRMVNHFVQEFKRKYKKDLATNKELL 518
DFDNR+VNHFV EFKRKYKKD++ N +
Sbjct: 233 DFDNRLVNHFVAEFKRKYKKDMSKNSRAM 261
Score = 141 bits (341), Expect = 7e-34
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = +1
Query: 1 KHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 180
K WPF+++SD KPKI+V YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVP
Sbjct: 88 KLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVP 147
Query: 181 AYFNDSQRQATKDAGTISGLNVLRI 255
AYFNDSQRQATKDAGTI+GLNVLR+
Sbjct: 148 AYFNDSQRQATKDAGTIAGLNVLRV 172
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/65 (70%), Positives = 55/65 (84%)
Frame = +2
Query: 473 QEEIQKGPRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 652
+ + +K RA+RRLRTACERAKRTLSSST+ASIE+DSLFEGIDFYT I+RARFE+L
Sbjct: 247 KRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDL 306
Query: 653 NADLF 667
+DLF
Sbjct: 307 CSDLF 311
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 151 bits (367), Expect = 5e-37
Identities = 71/88 (80%), Positives = 78/88 (88%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
INEPTAAAIAYGLDKK ERNVLIFDLGGGTFDVS+L+IEDGIFEVKST GDTHLGGED
Sbjct: 266 INEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDTHLGGED 325
Query: 435 FDNRMVNHFVQEFKRKYKKDLATNKELL 518
FDN MV+ FV++FK+KYKKD+ NK L
Sbjct: 326 FDNNMVDFFVKQFKQKYKKDITPNKRAL 353
Score = 118 bits (284), Expect = 5e-27
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 16 EVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFND 195
EVV++ G+PK+KV YKGE KTFF EE+SSMVL KMKETAEAYLG V +AV+TVPAYFND
Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177
Query: 196 SQRQATKDAG 225
SQRQATKDAG
Sbjct: 178 SQRQATKDAG 187
Score = 105 bits (253), Expect = 3e-23
Identities = 52/75 (69%), Positives = 63/75 (84%)
Frame = +2
Query: 473 QEEIQKGPRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEEL 652
+++ +K +RALRRLRTACERAKRTLSSSTQASIEIDSL++GIDFYTSITRARFEE+
Sbjct: 339 KQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEM 398
Query: 653 NADLFRLPWSQLEKS 697
NA LF+ +EK+
Sbjct: 399 NAHLFKKTLEPVEKA 413
Score = 95.5 bits (227), Expect = 4e-20
Identities = 46/55 (83%), Positives = 50/55 (90%)
Frame = +1
Query: 91 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRI 255
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRI
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRI 265
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 124 bits (298), Expect = 1e-28
Identities = 54/81 (66%), Positives = 71/81 (87%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
INEPTAAAIAYG+DKK GE+N+L+FDLGGGTFDVS+LTI++G+FEV +T GDTHLGGED
Sbjct: 871 INEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGED 929
Query: 435 FDNRMVNHFVQEFKRKYKKDL 497
FD ++ HF++ +K+K K++
Sbjct: 930 FDQNVMEHFIKLYKKKKGKNI 950
Score = 121 bits (291), Expect = 8e-28
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +1
Query: 1 KHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 180
K +PF+VV KP ++V K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVP
Sbjct: 786 KFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVP 845
Query: 181 AYFNDSQRQATKDAGTISGLNVLRI 255
AYFND+QRQATKDAG I+GL V+RI
Sbjct: 846 AYFNDAQRQATKDAGAIAGLTVMRI 870
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 488 KGPRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLF 667
K R RA+++LR E+AKR LS+ QA +EI+S FEG DF +TRARFEELNA LF
Sbjct: 948 KNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLF 1007
Query: 668 RLPWSQLEK 694
+ ++K
Sbjct: 1008 KSTLKPVQK 1016
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +1
Query: 46 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 225
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 226 TISGLNVL 249
TI+GL+VL
Sbjct: 62 TIAGLDVL 69
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/24 (79%), Positives = 19/24 (79%), Gaps = 2/24 (8%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKK--GTGERN 320
INEPTAAAIAYGLDK G ERN
Sbjct: 96 INEPTAAAIAYGLDKARGGKAERN 119
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 89.4 bits (212), Expect = 3e-18
Identities = 40/87 (45%), Positives = 61/87 (70%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 434
INEPTAAA+AYGL KK G NV++ DLGGGT DVS+L I+ G+F + AG+ LGG+D
Sbjct: 203 INEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNIQGGMFVTMAMAGNNRLGGQD 261
Query: 435 FDNRMVNHFVQEFKRKYKKDLATNKEL 515
F+ R + + +Q +++ + L ++++
Sbjct: 262 FNARFMQYLLQLIHKRFNRQLTCSEDI 288
Score = 58.8 bits (136), Expect = 5e-09
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 KHWPFEVVSDG-GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITV 177
K + F V +D G V KG PEE+ V+ K++ AE L TV AV++V
Sbjct: 117 KLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSV 176
Query: 178 PAYFNDSQRQATKDAGTISGLNVLRI 255
PA F+ QR AT A +++G+ VLR+
Sbjct: 177 PAEFDIKQRNATVKAASLAGITVLRV 202
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 83.4 bits (197), Expect = 2e-16
Identities = 35/66 (53%), Positives = 50/66 (75%)
Frame = +3
Query: 321 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLA 500
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGGEDFDN ++ + EFK++ DL+
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGGEDFDNTLLKFLIAEFKKESGVDLS 61
Query: 501 TNKELL 518
+ L
Sbjct: 62 KDSMAL 67
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 512 ALRRLRTACERAKRTLSSSTQASIEIDSLFEGID----FYTSITRARFEELNADL 664
AL+RLR A E+AK LSSS Q I + + ++R++FE L ADL
Sbjct: 66 ALQRLREAAEKAKIELSSSVQTDINLPYITVDASGPKHLNMKLSRSKFESLVADL 120
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 HWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 180
H P++VV I+V Y G+ + F PE+V +M+ T++K TAE L V + VI+VP
Sbjct: 145 HLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204
Query: 181 AYFNDSQRQATKDAGTISGLNVLRI 255
+Y+ D QR+ DA +GLN LR+
Sbjct: 205 SYYTDRQRRCMLDASATAGLNCLRL 229
Score = 68.5 bits (160), Expect = 6e-12
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKKGTGE---RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 425
+N+ TA ++AYG+ K+ RNV+ D+G + V I G +V STA + +LG
Sbjct: 230 MNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQLKVLSTAVEPNLG 289
Query: 426 GEDFDNRMVNHFVQEFKRKYKKDL 497
G DFD +V HF QEFK KYK D+
Sbjct: 290 GRDFDYVLVEHFAQEFKTKYKIDV 313
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 509 RALRRLRTACERAKRTLSSST-QASIEIDSLFEGIDFYTSITRARFEELNADLFRL 673
+A +L CE+ K+ +S++T + I I+ E D + + RA+FEEL ADL +L
Sbjct: 318 KAKIKLGAECEKLKKLMSANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKL 373
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 56.0 bits (129), Expect = 3e-08
Identities = 27/72 (37%), Positives = 43/72 (59%)
Frame = +1
Query: 40 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 219
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 220 AGTISGLNVLRI 255
A + GLNVL+I
Sbjct: 127 AAELVGLNVLQI 138
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 509 RALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLF 667
RA+ + R K+ LS++ + +I+ +F+G DF +TR EE+ DLF
Sbjct: 242 RAMAKFYKEALRVKQVLSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLF 294
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Frame = +3
Query: 255 INEPTAAAIAYGLDKK----GTGERNVLIFDLGGGTFDVSIL------TIEDGIFE---- 392
+N TA A+ YGL ++ T E++ + +D+G + +I+ T + GI E
Sbjct: 139 MNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKDRGISETAPQ 198
Query: 393 --VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYK 488
+K D LGG D R+ +H VQ FK+ YK
Sbjct: 199 LVIKGIGFDRTLGGHAIDMRLRDHLVQLFKKNYK 232
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 51.6 bits (118), Expect = 7e-07
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Frame = +3
Query: 312 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKR---- 479
+ VL++ LGG + DV++L++ +G+++V +T D LGG +FD +++ +FKR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGRNFDEVLLDLLANDFKRQVLL 212
Query: 480 -KYKKDLATNK 509
K+K D TNK
Sbjct: 213 WKWKIDPLTNK 223
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2
Query: 494 PRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITR 634
P +R+ +L+T+ E+ K LS+ A+ +DSL EGIDF ++R
Sbjct: 219 PLTNKRSKTKLQTSAEQCKNILSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 35.1 bits (77), Expect = 0.065
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +3
Query: 228 HLWLERSPNINEPTAAAIAYGLDK--KGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKS 401
H L + + T A A GL +G E + D G GT VS + +E+G +++
Sbjct: 1489 HAQLNKPADFTVETKGAGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHI 1548
Query: 402 TAGDTHLGGEDF 437
D H+ G F
Sbjct: 1549 KFADEHIPGSPF 1560
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 318 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDF 437
+ LI D G+F VS E+GI ++ GD H+ G F
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPGSPF 1467
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 246 SPNINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLG 425
S N P A + GT E +I DLG G + + + E G V +TH+
Sbjct: 3003 SVQTNAPVGKVSATVIAPSGT-ESKAVISDLGKGNYAIRFVPKEFGDHLVNVKFDETHIP 3061
Query: 426 GEDFDNRM 449
G F R+
Sbjct: 3062 GSPFKIRV 3069
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 31.9 bits (69), Expect = 0.61
Identities = 20/75 (26%), Positives = 33/75 (44%)
Frame = -3
Query: 511 SLLVARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRS 332
++ V R+ + N+ +L +L P KW P D +S P V + + PP
Sbjct: 333 AMRVGRALGFERFNALGYYLATKLQTEDPTKW-PPRYDDSSHFPHLWVVLSYDESTPPPR 391
Query: 331 KISTFRSPVPFLSRP 287
S + PF+S+P
Sbjct: 392 DGSAKPATQPFVSQP 406
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 1.4
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +3
Query: 321 VLIFDLGGGTFDVSILTIEDGIFEVK 398
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 29.9 bits (64), Expect = 2.5
Identities = 19/75 (25%), Positives = 32/75 (42%)
Frame = -3
Query: 511 SLLVARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRS 332
++ V R+ + N+ + +L P KW D T I +V PPPR
Sbjct: 540 AMRVGRALGFERFNALGFYFATKLQTEDPTKWPPSYEDSTHFIHLWVVLSYEESTPPPRD 599
Query: 331 KISTFRSPVPFLSRP 287
+ + +PF+S+P
Sbjct: 600 GTAKL-ATLPFVSQP 613
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 327 IFDLGGGTFDVSILTIEDGIFEV 395
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_43375| Best HMM Match : Pneumo_att_G (HMM E-Value=3.6)
Length = 774
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +1
Query: 331 LTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTL-TIAWSTTLSRSS 474
L S+A +T P+LP +V+ R PPP+T ++ T+ T+ STT + S+
Sbjct: 97 LDSSATTTTTPTLP--IVTLR--PPPSTSVTQIVTMTTVTISTTTAMST 141
>SB_33576| Best HMM Match : Pentaxin (HMM E-Value=1.3e-06)
Length = 799
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 418 WVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVP 302
+++PA+ S +PS V +D VP P I+ + VP
Sbjct: 267 YLTPAISTQSTLPSGTVTLDQHNVPHPSGTITLDQHNVP 305
>SB_4695| Best HMM Match : SAM_1 (HMM E-Value=0.012)
Length = 1348
Score = 29.1 bits (62), Expect = 4.3
Identities = 35/109 (32%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Frame = -3
Query: 544 PLTCSTQTPKSSLLVARSFLYFLLNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVR 365
PL ST L+ A +F T + + SSPP + S + I S+ V
Sbjct: 131 PLHSSTADGDYGLVGAAAFPGASTAHATSTTSYLGASSSPPVYQSGTT--SPHITSADVG 188
Query: 364 MDT-SKVPPPRS----KISTFRSPVPFLSRP*AIAAAVGSLIFGERSSQ 233
T VPPPR T+ P PF SRP A+ G+ F ERS +
Sbjct: 189 GGTYDYVPPPRPTPPMNTPTYEIPPPFKSRP--EEASTGTYGFVERSKE 235
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 334 TSAAVPSTCPSLPSRMVSSR*NPPPATP 417
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_19421| Best HMM Match : Ribosomal_L36 (HMM E-Value=0.85)
Length = 647
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 400 PPPATPTWEVRTL-TIAWSTTLSRSSRGNTKRTSLPT 507
PPPA T E L T +W+ T S + R KRT LPT
Sbjct: 436 PPPAFQTDEPERLQTSSWTETASGTGREEFKRT-LPT 471
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/70 (30%), Positives = 30/70 (42%)
Frame = -3
Query: 463 TKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSRP* 284
+ W+ KS K P +S + SS TSK PP + +ST SP
Sbjct: 1244 SSWMVTNCQKSC--KRCPPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADSNN 1301
Query: 283 AIAAAVGSLI 254
A+ A+ SL+
Sbjct: 1302 AVNVAISSLV 1311
>SB_4985| Best HMM Match : NHL (HMM E-Value=4.7e-09)
Length = 124
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 333 DLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK--DLATN 506
D GT+ VS G+ +V T D H+ G F ++N F + +K D+
Sbjct: 3 DNRNGTYGVSYTPQSTGMHKVSVTVRDKHIQGSPFKVNVMNPGSDSFVKFGRKGSDIGEF 62
Query: 507 KELLGVCV 530
+ GV V
Sbjct: 63 NGIFGVAV 70
>SB_13906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +1
Query: 325 LSLTSAAVPSTCPSLPSRMVSSR*NPPPATPTWEVRTLTIAWSTTLSRSSRGNTKRTSLP 504
++L+S+ +P+T L S M SS T T + + + +TTL+ + T LP
Sbjct: 415 VALSSSVLPTTTSVLTSSMESSSMATTSTTSTPSLESSMTSNNTTLTLAEAVATSSPVLP 474
Query: 505 TKSS 516
T +S
Sbjct: 475 TTTS 478
>SB_12318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 420
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +3
Query: 471 FKRKYKKDLATNKELLGVCVLHV-RGQRGPCHRPHKRALR*ILSLRVLTSTRQLL 632
FKR +++L + + LG CV+ V R + P H+RA R L TST ++
Sbjct: 47 FKRSIRRNLTYHCKELGKCVVDVARRNQCPASVQHERAPRSAQILPRATSTTTIV 101
>SB_57752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 3/58 (5%)
Frame = +3
Query: 99 FHGAYENEGNCRSLSWQNCAECSYHGSRVLQ*LSKTSHKRCRYHLWLER---SPNINE 263
+HG CR + WQ V++ + K S C +LE S N NE
Sbjct: 30 YHGIKRKADECRQVEWQFSKHQKALTGHVIKTIDKPSESACETECYLEANCVSINFNE 87
>SB_52092| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 476 EEIQKGPRYQQRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELN 655
EE QK R + +A T+SS + +I L E + YT+ T R +++
Sbjct: 209 EEHQKTRADLARLWAHSQELWNQANETVSSISTVKEKITQLDEKLSEYTNRTMERIDQIK 268
Query: 656 ADL 664
AD+
Sbjct: 269 ADM 271
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -2
Query: 329 DKYISFSSTLFVKTVSNRSSSRFIDI 252
+K ISF +LF+ VSN S+ R+I I
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICI 777
>SB_23904| Best HMM Match : RdRP (HMM E-Value=0)
Length = 1511
Score = 27.9 bits (59), Expect = 9.9
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = +1
Query: 631 SCSLRGAERRSVQVTMEPVGEVFSVMPRL 717
SC +RGAER++ ++ + G ++ P++
Sbjct: 1028 SCLIRGAERKTAKMLQQKTGAKITIRPKV 1056
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,677,960
Number of Sequences: 59808
Number of extensions: 577260
Number of successful extensions: 2001
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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