Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0225
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    24   0.95 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.2  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           23   2.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   8.9  
AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochr...    21   8.9  

>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 364 RCSRKAQAMRKKVRHFM 414
           +CS K + M KKV HF+
Sbjct: 72  KCSEKQKEMTKKVIHFL 88


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 553 TASTGCWFVFKD 518
           TAST CW VF D
Sbjct: 529 TASTRCWEVFMD 540


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 456 LALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSF 325
           L+ +SVA T  S  H++ D L       +A   +SQT+   + F
Sbjct: 165 LSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQF 208


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -1

Query: 456 LALRSVARTVLSPQHKMPDLLPHRLSFPAAAILWSQTLYLRFSF 325
           L+ +SVA T  S  H++ D L       +A   +SQT+   + F
Sbjct: 156 LSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNSYQF 199


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 109 DVTGADEDRSKF 144
           D+T +D DRSK+
Sbjct: 59  DITTSDRDRSKY 70


>AF265299-1|AAG17642.1|   63|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 63

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 621 CLASNPQQQE 650
           CLA+NP+ QE
Sbjct: 11  CLANNPEAQE 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,523
Number of Sequences: 336
Number of extensions: 2788
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)