Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0225
         (654 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.)               39   0.004
SB_54572| Best HMM Match : CARDB (HMM E-Value=4.4)                     31   0.62 
SB_50160| Best HMM Match : Keratin_B2 (HMM E-Value=1.6)                31   0.82 
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)                     31   1.1  
SB_34771| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   1.1  
SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   4.4  
SB_22680| Best HMM Match : Peptidase_A17 (HMM E-Value=5.3e-14)         28   5.8  
SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)                    28   5.8  
SB_57910| Best HMM Match : SAPS (HMM E-Value=2.8)                      28   5.8  
SB_54853| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)                 28   5.8  
SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)              28   5.8  
SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   7.6  

>SB_9533| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 593

 Score = 38.7 bits (86), Expect = 0.004
 Identities = 16/38 (42%), Positives = 25/38 (65%)
 Frame = +1

Query: 85  EDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYE 198
           ++TL +F D TGAD   ++ FL+ +NW  + AL +F E
Sbjct: 2   DETLSRFVDRTGADPALARDFLQGTNWNFEEALKAFQE 39


>SB_54572| Best HMM Match : CARDB (HMM E-Value=4.4)
          Length = 292

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 142 FFLESSNWQLDVALSSFYENGGNADEAPA 228
           FFL+ +NW L  A+ +FY+   + D+ P+
Sbjct: 45  FFLDMANWNLQAAIGAFYDFNCSNDKLPS 73


>SB_50160| Best HMM Match : Keratin_B2 (HMM E-Value=1.6)
          Length = 466

 Score = 31.1 bits (67), Expect = 0.82
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +1

Query: 130 DRSKFFLESSNWQLDVALSSFYENGGNADEAPANPTSAASFSFCQTA 270
           DRS+    + N+  D  LS +Y   G+A      PTS  S+ +C TA
Sbjct: 160 DRSQNLHHNGNYLCDSGLSGWYRISGDAGYRM--PTSCVSYDYCGTA 204


>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
          Length = 825

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 61  EITMSANREDTLRQFCDVTGADEDRSKFFLES 156
           ++T S N E+TL    DV  +++ R ++F+ES
Sbjct: 271 KLTESGNTEETLLSVTDVVDSEDGRDEYFMES 302


>SB_34771| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 129

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = +1

Query: 70  MSANREDTLRQFCDVTGADEDRSKFFLESSNWQLDVALSSFYEN 201
           + +++ + +RQF   T  +E  +   L   +W+LDVA  ++++N
Sbjct: 4   LKSSQREKVRQFIAFTETNERTAITCLNQHDWRLDVASDNYFQN 47


>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3760

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 61  EITMSANREDTLRQFCDVTGADEDRSKFFLES 156
           ++T S N E+TL    DV  +++ R ++F+ES
Sbjct: 249 KLTESGNTEETLLSVTDVVDSEDGRDEYFMES 280


>SB_23539| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1041

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = +3

Query: 414 AGGSERSGQQILGPSKGRKDIVSEMFKSVREREQSSLKT 530
           A G+ RSG+++ GP  G++  + ++ + VR      L T
Sbjct: 559 AAGARRSGRRLRGPDAGKRGPLGQIVRKVRRSGTQCLWT 597


>SB_22680| Best HMM Match : Peptidase_A17 (HMM E-Value=5.3e-14)
          Length = 765

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/47 (29%), Positives = 25/47 (53%)
 Frame = +2

Query: 185 QVSMRTVVMQMRLQLIQRVRHHSRSARQRYGITARLTSGTKVPEKRK 325
           Q+S R+V++   L L+   R+H+  AR  +G     +   +  +KRK
Sbjct: 697 QISKRSVLVHRDLLLLLSSRNHTHDARSTFGSILNRSRSHRGRKKRK 743


>SB_6138| Best HMM Match : 7tm_1 (HMM E-Value=2e-19)
          Length = 494

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -1

Query: 480 RRYLSCLYLALRSVARTVLSP--QHKMPDLLPHRLSFPAAAILWSQTLY 340
           R + S + + +   A    SP  QH++ D+LP     P AAI W   +Y
Sbjct: 53  RAFKSVVLIVIMLTAVIDYSPVYQHRVQDVLPKLNHTPLAAIYWYVNIY 101


>SB_57910| Best HMM Match : SAPS (HMM E-Value=2.8)
          Length = 406

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 396 LPHRLSFPAAAILWSQTLYLRFSFFL 319
           +PHR+S PA  +L S T  +R SFF+
Sbjct: 56  VPHRVSLPACHLLNSLTSTVRPSFFI 81


>SB_54853| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
          Length = 200

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = +2

Query: 233 QRVRHHSRSARQRYGITARLTSGTKVPEKRKKENLKYKVWDHRIAAAGKLKR*GRRSGI 409
           +++R   R A++  G  A      + P  + +EN++Y +   R AAA    + G + G+
Sbjct: 88  KKIRQKERRAKEAGGRAANEAERAERPRAQLRENIQYVMAGLRSAAAQARSQAGSKMGV 146


>SB_11854| Best HMM Match : Neuromodulin (HMM E-Value=7.3)
          Length = 531

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/61 (22%), Positives = 27/61 (44%)
 Frame = +3

Query: 471 DIVSEMFKSVREREQSSLKTNQHPVEAVVEGASSPELAID*DKLQMITSQCLASNPQQQE 650
           D+ S   +S R+R+    +    P   ++   S+PE     D L  +    +AS+ ++  
Sbjct: 300 DMSSRKLRSKRQRKTHDKRYKSEPDHGLLSSKSTPEKRSKSDPLMEVAQSAVASSSKKAR 359

Query: 651 P 653
           P
Sbjct: 360 P 360


>SB_17350| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2956

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 18/41 (43%), Positives = 22/41 (53%)
 Frame = +3

Query: 462 GRKDIVSEMFKSVREREQSSLKTNQHPVEAVVEGASSPELA 584
           G  D+VS    + R  E +  KTNQ  V AV +  SSP LA
Sbjct: 588 GSYDLVSFPGDNDRTSETAYSKTNQGFVNAVDKSRSSPNLA 628


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,791,403
Number of Sequences: 59808
Number of extensions: 352041
Number of successful extensions: 905
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)