Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0220
         (336 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U34962-1|AAC50470.1|  324|Homo sapiens HCSX protein.                   31   1.2  
BC025711-1|AAH25711.1|  324|Homo sapiens NK2 transcription facto...    31   1.2  
AB021133-1|BAA35181.1|  324|Homo sapiens Nkx-2.5 protein.              31   1.2  
AJ236542-1|CAB43003.1|  132|Homo sapiens anti-HCV E2 antibody, V...    28   8.2  

>U34962-1|AAC50470.1|  324|Homo sapiens HCSX protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 285 KXPRSKKRPTTARTRAVPIFAEDQSGAHRPRAQRR 181
           K PR++K+   A  +AV +   +   A RPRA+RR
Sbjct: 104 KDPRAEKKELCALQKAVELEKTEADNAERPRARRR 138


>BC025711-1|AAH25711.1|  324|Homo sapiens NK2 transcription factor
           related, locus 5 (Drosophila) protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 285 KXPRSKKRPTTARTRAVPIFAEDQSGAHRPRAQRR 181
           K PR++K+   A  +AV +   +   A RPRA+RR
Sbjct: 104 KDPRAEKKELCALQKAVELEKTEADNAERPRARRR 138


>AB021133-1|BAA35181.1|  324|Homo sapiens Nkx-2.5 protein.
          Length = 324

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 285 KXPRSKKRPTTARTRAVPIFAEDQSGAHRPRAQRR 181
           K PR++K+   A  +AV +   +   A RPRA+RR
Sbjct: 104 KDPRAEKKELCALQKAVELEKTEADNAERPRARRR 138


>AJ236542-1|CAB43003.1|  132|Homo sapiens anti-HCV E2 antibody, VH
           segment protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 164 CARDHPRRCALGLCAP 211
           CARD PR C+ G C P
Sbjct: 101 CARDPPRYCSAGRCYP 116


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,382,120
Number of Sequences: 237096
Number of extensions: 671582
Number of successful extensions: 1674
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1674
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1794632842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)