Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0218
(728 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0237 - 1570395-1571225,1572225-1572245,1572336-1572506,157... 34 0.13
02_05_0509 - 29630224-29630328,29630408-29630500,29630669-296307... 32 0.41
10_08_0509 + 18419815-18422150,18422249-18422291,18423154-184234... 31 0.94
08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534 31 1.2
03_06_0095 - 31612293-31612607,31612982-31613119,31613229-316133... 31 1.2
02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230 31 1.2
05_04_0331 + 20317482-20318174,20318518-20318685,20318773-203188... 29 2.9
02_05_0750 - 31479876-31480985 29 2.9
07_01_1093 + 10033403-10033984 29 3.8
06_03_0556 - 22097423-22097445,22097579-22097613,22097873-220979... 29 3.8
03_01_0104 - 830884-831282,831511-832205,832368-833387,833570-83... 29 3.8
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 29 5.0
09_02_0255 + 6338611-6338655,6338694-6338909 28 6.6
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 28 6.6
01_05_0344 + 21172101-21172233,21172332-21172402,21172492-211726... 28 6.6
06_02_0084 - 11547820-11548773 28 8.7
04_04_1623 - 34846056-34846223,34846547-34846644,34846738-348468... 28 8.7
03_06_0674 - 35449373-35449465,35449959-35450112,35450763-354508... 28 8.7
03_05_1129 - 30595580-30595771,30596119-30597162 28 8.7
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 28 8.7
01_06_0921 - 33017892-33018953 28 8.7
01_01_0198 + 1718374-1718875,1719591-1719604 28 8.7
01_01_0171 + 1446221-1446902,1447040-1447221,1447339-1447409,144... 28 8.7
>02_01_0237 -
1570395-1571225,1572225-1572245,1572336-1572506,
1572942-1573070,1574364-1574657
Length = 481
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/68 (35%), Positives = 30/68 (44%)
Frame = +2
Query: 317 NGSGGADAKHLDVGDASDDEKDMSAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDE 496
NG GGADAK D + DD+ D D E + EQ A PP GR + +
Sbjct: 31 NGRGGADAKE-DYLNWDDDDDDDEDEDEE---EEEAEQVMAWAAKCRPPAGRNVVNVDSF 86
Query: 497 GKMYEGTS 520
G +G S
Sbjct: 87 GAAGDGCS 94
>02_05_0509 -
29630224-29630328,29630408-29630500,29630669-29630719,
29630864-29630930,29631181-29631227,29631300-29631350,
29631433-29631552,29632777-29632869,29633440-29633485,
29633577-29633629,29633800-29633839,29633938-29634623
Length = 483
Score = 32.3 bits (70), Expect = 0.41
Identities = 17/69 (24%), Positives = 30/69 (43%)
Frame = +2
Query: 245 SRERALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEGVWSPDI 424
+ ERA G P P D G+G D L+ G E++ + E V + +
Sbjct: 48 AEERAAWGGGGTPPTPEPKSDADAEGAGSLDRVELNAGAGGGREREDDEGEDEAVGARGV 107
Query: 425 EQSFQEALA 451
E + ++A++
Sbjct: 108 EMNGEDAMS 116
>10_08_0509 +
18419815-18422150,18422249-18422291,18423154-18423487,
18423766-18423878,18424461-18424589,18424771-18424864,
18424967-18425050,18425859-18426047,18426897-18427017,
18427476-18427692
Length = 1219
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/35 (45%), Positives = 19/35 (54%)
Frame = +2
Query: 245 SRERALAAGTIASPWSTPAGAPDTNGSGGADAKHL 349
SR RA A G + S ST T GSG DA+H+
Sbjct: 7 SRVRAGAVGALRSEGSTQGRGGRTGGSGAEDARHV 41
>08_02_0780 + 21148283-21148634,21148730-21149146,21150194-21150534
Length = 369
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +2
Query: 254 RALAAGTIASP---WSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEGVWSPDI 424
R + AGT ++ G G+GG H + + S A G W P
Sbjct: 31 RVVTAGTTTMDTGGYNNGGGGGGGGGNGGGGGDHQESSSSGGGGGQSSRLAARGHWRPAE 90
Query: 425 EQSFQEALAIYPP 463
+ +E +A+Y P
Sbjct: 91 DAKLRELVALYGP 103
>03_06_0095 -
31612293-31612607,31612982-31613119,31613229-31613315,
31613410-31613469,31613563-31613662,31613757-31614163,
31614335-31614805,31614910-31615032,31615396-31615479,
31615609-31615678,31615767-31615846
Length = 644
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 502 DVRRNELIARYIKLRTGQNAYEKTSLVTHTGAS*AKTTRNSSQT*SAILAARAYKPGTFT 681
++ +L+ Y+K QN +KTSL+ A + N + S +L Y PG +
Sbjct: 437 NIHNAQLMHAYLKYGVPQNNLKKTSLLVKAACKIAGRSINVAVIQSMVLGCNTYCPGQWL 496
Query: 682 R 684
R
Sbjct: 497 R 497
>02_01_0625 + 4690607-4690696,4692673-4692734,4692867-4693230
Length = 171
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2
Query: 302 GAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEG 406
G P+ NG GG+D D G DD++D D EG
Sbjct: 108 GDPEANGEGGSDD---DDGGEDDDDEDEDGDDDEG 139
>05_04_0331 +
20317482-20318174,20318518-20318685,20318773-20318895,
20319094-20319165,20321217-20321431,20321521-20321593,
20322092-20322568,20322970-20323077,20323184-20323192,
20323193-20323552
Length = 765
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 272 TIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADA 400
TIA + GA D+ +G A GDA D E+D D+
Sbjct: 163 TIAGDQADARGAQDSTAAGDAQDSTTAAGDAHDSEEDFGDYDS 205
>02_05_0750 - 31479876-31480985
Length = 369
Score = 29.5 bits (63), Expect = 2.9
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 248 RERALAAGTIASPWSTPAGAPDTNG----SGGADAKHLDVGDASDDEKDMSAADAEGVWS 415
R+R L T A P TPA P+ G D K + GD +E+ + +
Sbjct: 77 RQRQLVLATTA-PAKTPAREPEVINVWELMEGLDDKD-EEGDVRGEERRGQSTPGSPEFD 134
Query: 416 PDIEQSFQEALAIYPPCG 469
PDI +F++AL P G
Sbjct: 135 PDIIAAFRKALDEVPAAG 152
>07_01_1093 + 10033403-10033984
Length = 193
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 226 RPGTTLISRARARSRHHCVSVEHAGRRAR 312
RP L SR R R+R + EH GR R
Sbjct: 68 RPARRLTSRCRGRNRQRLTANEHGGRGCR 96
>06_03_0556 -
22097423-22097445,22097579-22097613,22097873-22097941,
22113969-22114807
Length = 321
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +2
Query: 269 GTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 397
G +A T D +D K ++ GD+SDDE D++ A+
Sbjct: 105 GGVADEGETVGAIVDEMEREDSDNKRVEEGDSSDDETDINPAE 147
>03_01_0104 -
830884-831282,831511-832205,832368-833387,833570-833696,
834342-834709,834780-835059,835137-835466
Length = 1072
Score = 29.1 bits (62), Expect = 3.8
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = -1
Query: 356 RHRDAWRQRRPIHWCRARRPACSTETQWCRLRARAREISVVP 231
RHR R+RR H A A WCRLR AR+ S VP
Sbjct: 6 RHR---RRRRRAH--TADEAAAVLRKAWCRLRLSARDPSRVP 42
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 28.7 bits (61), Expect = 5.0
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 227 GRVLR*SRERALAAGTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAADAEG 406
GR+ R R A A T A+ +TPA AP + G+ G DD ++M + D
Sbjct: 212 GRLHRLERPPA-AHITTAAAATTPAPAPADDWGDGSWTVDCSCGITYDDGEEMVSCDECN 270
Query: 407 VW 412
VW
Sbjct: 271 VW 272
>09_02_0255 + 6338611-6338655,6338694-6338909
Length = 86
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 278 ASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAA 394
AS P G+P+ +GS G + D +D+E++ +AA
Sbjct: 22 ASAAVQPEGSPEASGSAGFGSAEAGDDDDNDEEEEAAAA 60
>02_02_0279 -
8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -1
Query: 350 RDAWRQRRPIHWCRARRPACSTETQWCRL 264
R AWR+RR W RRP C E RL
Sbjct: 120 RPAWRERRGRRW--RRRPRCEEELPMDRL 146
>01_05_0344 +
21172101-21172233,21172332-21172402,21172492-21172653,
21172995-21173100,21174242-21174439,21174565-21174631,
21174868-21175051,21175145-21175324,21175408-21175587,
21176472-21176627,21177487-21178067,21178535-21178640,
21179152-21179331,21179620-21179892
Length = 858
Score = 28.3 bits (60), Expect = 6.6
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 290 STPAGAPDTNGSGGADAK-HLDVGDA-SDDEKDMSAADAEG--VWSPDIEQSFQEALAIY 457
S P+GAP G GG ++ ++ GD+ D D A D +G V D + + +EA A
Sbjct: 551 SCPSGAPHRGGGGGGGSRAGMEGGDSVLDAVLDEEALDYDGDDVEMADADDAVEEAQAQE 610
Query: 458 PP 463
P
Sbjct: 611 DP 612
>06_02_0084 - 11547820-11548773
Length = 317
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 350 RDAWRQRRPIHWCRARRPACSTETQWCRLRARARE 246
R AWR+RR W RRP C E R+ A E
Sbjct: 165 RPAWRERRGRQW--RRRPLCEEELPVGVARSSAHE 197
>04_04_1623 -
34846056-34846223,34846547-34846644,34846738-34846829,
34847096-34847202,34847385-34847490,34848108-34848547
Length = 336
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 290 STPA--GAPDTNGSGGADAKHLDVG--DASDDEKDMSAADAEGVWSPDIEQSFQEALA 451
STP A DT + LD G D SD S +D EGV S ++++ F A A
Sbjct: 42 STPTFPSAADTPAAPAPPPASLDGGHGDTSDGSGSDSDSDWEGVESTELDEDFSAASA 99
>03_06_0674 -
35449373-35449465,35449959-35450112,35450763-35450860,
35450947-35451234,35451313-35451503,35451789-35452006,
35452314-35452653,35452726-35453167
Length = 607
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 281 SPWSTPAGAPDTNGSGGADAKHLDV 355
SP ST AG P G+G A + H V
Sbjct: 555 SPCSTVAGVPKNKGNGAASSTHKSV 579
>03_05_1129 - 30595580-30595771,30596119-30597162
Length = 411
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +2
Query: 254 RALAAGTIASPWSTPA--GAPDTNGSGGADAKHLDVGDASDDEKDMS 388
R+ +A T+A W+T G GGA A+ D G+ DD K M+
Sbjct: 284 RSSSATTLARRWATKGFDAVLSGGGGGGAGAQEAD-GEEDDDYKRMT 329
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 653 PGPTSRAHSQGCESLFPRCG 712
PGP+SR HS L PR G
Sbjct: 858 PGPSSRVHSGSVSPLHPRAG 877
>01_06_0921 - 33017892-33018953
Length = 353
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 269 GTIASPWSTPAGAPDTNGSGGADAKHLDVGDASDDEKDMSAAD 397
G +A T D +D + ++ GD+SDDE D++ A+
Sbjct: 105 GGVADEGETVGAIVDEMEKEDSDNERVEEGDSSDDETDINPAE 147
>01_01_0198 + 1718374-1718875,1719591-1719604
Length = 171
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1
Query: 350 RDAWRQRRPIHWCRARRPACSTETQWCRLRARARE 246
R AWR+RR W RRP C E R+ A E
Sbjct: 96 RPAWRERRGRRW--RRRPRCEEELPIGVARSTAHE 128
>01_01_0171 +
1446221-1446902,1447040-1447221,1447339-1447409,
1447480-1447486,1447530-1447619,1447694-1447981,
1448121-1448333,1448860-1449087
Length = 586
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 368 DDEKDMSAADAEGVWSPDIEQSFQEALAIYPPCGRRKIILS-DEGKMYE 511
+++ D+SAA+ +W +I+ S + G+ ILS D+GK+ E
Sbjct: 475 EEDADVSAAELCSLWENEIKNSDWHPFRVVMVDGKEMEILSEDDGKLCE 523
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,526,613
Number of Sequences: 37544
Number of extensions: 398596
Number of successful extensions: 1435
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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