Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0217
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   4.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   4.4  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         22   5.9  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       21   7.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = -3

Query: 623 QMKVAGCTEEDLTACYRLGSNTNKPRP 543
           Q   A CTE+  TA YR      K  P
Sbjct: 69  QTNCAKCTEKQRTAAYRSIKRLKKEYP 95


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -3

Query: 731 GQA*RWRRVVKVLLFHGIPESDATDPATAIVGILTNQMK 615
           G++ R RRV K     G P ++   P TA  G    ++K
Sbjct: 206 GRSPRTRRVKKPGAKQGAPTAEEKRPRTAFSGAQLARLK 244


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 594 LFCATSHLHLVG*YTHNCCCW 656
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 594 LFCATSHLHLVG*YTHNCCCW 656
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 594 LFCATSHLHLVG*YTHNCCCW 656
           L+  T++LH++     NC  W
Sbjct: 156 LYHTTAYLHIITMINMNCALW 176


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 13/55 (23%), Positives = 23/55 (41%)
 Frame = -2

Query: 348 NKRSKIEQMFELQHLKTKFPSAQKAQGAPQSLGNLMTNPRRHQNQRQSEKSARGR 184
           ++R K  +  E    + K P A+   G  Q   N  + PR++   R     +R +
Sbjct: 162 SERMKTTRALEKTSEELKIPKAKINTGKTQYNLNSKSLPRQYSQSRGRHNQSRSK 216


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = -3

Query: 287 RLKKRKELLSHWEIS*RTQDGTKISGRARNRQEDDSSKVVWRYLELIHR 141
           R+K +KEL +  EI+ + +   +   R + +Q++   K+  +    IH+
Sbjct: 58  RMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQ 106


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 517 LKLRNLTNIGLGLLVLEPNR*QAVKS 594
           LKL+NLT  G GL  +     Q V+S
Sbjct: 614 LKLQNLTLSGKGLKKITGKMFQGVRS 639


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = -3

Query: 287 RLKKRKELLSHWEIS*RTQDGTKISGRARNRQEDDSSKVVWRYLELIHR 141
           R+K +KEL +  EI+ + +   +   R + +Q++   K+  +    IH+
Sbjct: 209 RMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQ 257


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = -3

Query: 287 RLKKRKELLSHWEIS*RTQDGTKISGRARNRQEDDSSKVVWRYLELIHR 141
           R+K +KEL +  EI+ + +   +   R + +Q++   K+  +    IH+
Sbjct: 268 RMKLKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQ 316


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,470
Number of Sequences: 336
Number of extensions: 3825
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)