Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0217
         (733 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1044 + 33728623-33728768,33728814-33728993,33729446-337295...    31   0.94 
10_08_0904 + 21464762-21467479                                         29   2.9  
01_01_1100 + 8716853-8716860,8717739-8717844,8717931-8718015,871...    29   2.9  
04_04_1271 - 32282865-32283167,32283429-32283561,32283683-322839...    28   6.6  
01_06_0323 - 28476459-28476915,28477075-28477525,28477623-284779...    28   8.8  

>02_05_1044 +
           33728623-33728768,33728814-33728993,33729446-33729523,
           33729834-33729930,33730206-33730339,33730944-33731025,
           33731631-33731717,33731875-33731981,33732674-33732845,
           33733018-33733259,33733482-33733563,33733954-33734019,
           33734040-33734159,33734935-33735012,33735083-33735178,
           33735791-33735897,33736031-33736199,33736402-33736452,
           33736567-33736650,33736946-33737040,33737175-33737265,
           33737342-33737488,33737614-33737676
          Length = 857

 Score = 31.1 bits (67), Expect = 0.94
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = -2

Query: 528 PEFEAMH-EVWKNKTLLKGSRVIISEFLTKSRHDVFLEA--RSHFGVKRCWTTDGKIIVL 358
           P+ + M  E+WKN    K  +     F    RHD  L +      G  +  T+D   +V 
Sbjct: 356 PDMDKMEFELWKNGLPEKEQKYATGFFTVIKRHDALLPSILAQSDGSNQTKTSDDLFVVP 415

Query: 357 LPDNKRSKIEQMFELQH 307
             +  +S +E+  EL H
Sbjct: 416 YSEEYKSSLEKAAELLH 432


>10_08_0904 + 21464762-21467479
          Length = 905

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = -3

Query: 689 FHGIPESDATDPATAIVGILTNQMKVAGCTEEDLTACYRLGSNTNKPR-PILVRFLSLRR 513
           F+G+PE +      AI G + N+  V G   E      RLG   ++P      R  +   
Sbjct: 249 FYGMPERNWVSWGAAIAGCVQNEQYVRGL--ELFIEMQRLGLGVSQPSYASAFRSCAAMS 306

Query: 512 CMKCGRTRHS 483
           C+  GR  H+
Sbjct: 307 CLNTGRQLHA 316


>01_01_1100 +
           8716853-8716860,8717739-8717844,8717931-8718015,
           8718632-8718715,8718969-8719073,8719621-8719898
          Length = 221

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
 Frame = -2

Query: 303 KTKFPSAQK---AQGAPQSLGNLMTNPRRHQNQRQSEKSARG 187
           +++F S  K   +QG+ QSLG     P    NQ++ ++S+ G
Sbjct: 136 RSRFTSGSKNRSSQGSAQSLGQQSAEPAHKHNQKRKDESSLG 177


>04_04_1271 -
           32282865-32283167,32283429-32283561,32283683-32283908,
           32284058-32284274,32284398-32284558,32285309-32285449,
           32285621-32286944
          Length = 834

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 284 AEGNLVFRC*SSNICSILLRLLSGRRTIIFPSVVQQ 391
           A+GNL  +C   +   +LL ++SG+R    P+ +++
Sbjct: 699 AQGNLTLKCDVYSFGVVLLEIISGKRNRTLPTFLRE 734


>01_06_0323 -
           28476459-28476915,28477075-28477525,28477623-28477904,
           28478089-28478118,28480560-28481433
          Length = 697

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -2

Query: 717 MASRRKGPSVSWNPGVRCHR--PSNSNCGYINQPNEGGWLHRRGL 589
           +AS RKG  +SW+   RC R   ++  CGY       G L   GL
Sbjct: 230 IASLRKGFQMSWDRSDRCSRCELTSGKCGYNQNGKFLGCLCANGL 274


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,028,935
Number of Sequences: 37544
Number of extensions: 429553
Number of successful extensions: 1050
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)