Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0217
(733 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6319| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_57207| Best HMM Match : Transposase_22 (HMM E-Value=0.17) 35 0.059
SB_53000| Best HMM Match : Transposase_22 (HMM E-Value=0.026) 35 0.059
SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_44235| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_31647| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_22222| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_45202| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12) 30 2.2
SB_57452| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2) 30 2.2
SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5) 29 2.9
SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17) 29 3.9
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 29 3.9
SB_51958| Best HMM Match : TBC (HMM E-Value=0.00039) 28 6.8
SB_13857| Best HMM Match : Thymosin (HMM E-Value=1.8) 28 6.8
SB_39791| Best HMM Match : RVT_1 (HMM E-Value=0.083) 28 9.0
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 28 9.0
>SB_6319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 157
Score = 44.4 bits (100), Expect = 1e-04
Identities = 21/79 (26%), Positives = 39/79 (49%)
Frame = -3
Query: 719 RWRRVVKVLLFHGIPESDATDPATAIVGILTNQMKVAGCTEEDLTACYRLGSNTNKPRPI 540
R R + LL IPE D +P +V + +MK+ +L +R+G++ RP+
Sbjct: 25 RTRSMRNNLLLFNIPEKDGENPHEVLVNTMKVEMKLQNVDAVELERVHRIGNSKTSSRPL 84
Query: 539 LVRFLSLRRCMKCGRTRHS 483
+ +FL + + G+ H+
Sbjct: 85 VAKFLRFQDRERVGKNAHA 103
>SB_57207| Best HMM Match : Transposase_22 (HMM E-Value=0.17)
Length = 262
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -2
Query: 480 KGSRVIISEFLTKSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRSKIEQMFELQHLK 301
K ++ ++E LTK R D S + + WT DG I V L +K E + L+ LK
Sbjct: 193 KKDKLRVNEDLTKGRLDAIKAINSKLDIYKLWTIDGTIHVRLNKDKDKAKEIIHSLRQLK 252
>SB_53000| Best HMM Match : Transposase_22 (HMM E-Value=0.026)
Length = 301
Score = 35.1 bits (77), Expect = 0.059
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -2
Query: 480 KGSRVIISEFLTKSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRSKIEQMFELQHLK 301
K ++ ++E LTK R D S + + WT DG I V L +K E + L+ LK
Sbjct: 232 KKEKLRVNEDLTKGRLDAIKAINSKLDIYKLWTIDGTIHVRLNKDKDKAKEIIHSLRQLK 291
>SB_41384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 696 PSVSWNPGVRCHRPSNSNC--GYINQPNEGGWLHRRGLNCLLSV 571
P + P R H PS + G+ ++PN G W+ R C+L V
Sbjct: 97 PRMRVRPSFRGHGPSGNRSAPGHFDRPNNGSWIQRGPPKCILHV 140
>SB_44235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/69 (21%), Positives = 31/69 (44%)
Frame = -3
Query: 689 FHGIPESDATDPATAIVGILTNQMKVAGCTEEDLTACYRLGSNTNKPRPILVRFLSLRRC 510
F IPE + +P +V + +MK+ +L R+ + RP++ +FL +
Sbjct: 38 FFNIPEKNGENPHEVLVNTMIVEMKLQNVDAIELERVNRIANRKTSSRPLVAKFLRFQDR 97
Query: 509 MKCGRTRHS 483
+ + H+
Sbjct: 98 ERVRKNAHA 106
>SB_31647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 32.3 bits (70), Expect = 0.42
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -2
Query: 483 LKGSRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLLPDNKRSKIEQMFEL 313
L + + ISE LT + +F L + F K WT GK VL+ ++ S Q+ L
Sbjct: 297 LADNSIYISESLTANNKAIFKGALSFKKEFRFKFIWTVHGK--VLIRKDEHSPAIQIKSL 354
Query: 312 QHLKTKFPSAQKAQGAPQ 259
QHL + Q APQ
Sbjct: 355 QHL----ADLRSEQAAPQ 368
>SB_22222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 32.3 bits (70), Expect = 0.42
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 695 LLFHGIPESDATDPATAIVGILTNQMKVAGCTEEDLTACYRLGS--NTNKPRPILVRFLS 522
L F GIPE + + I+ L +++ + D A +RLG + KPRPI+ RF S
Sbjct: 26 LNFKGIPEKEG-ESCENIIRDLLHELGFSNPQNIDFHAVHRLGKPRDGGKPRPIIARFNS 84
>SB_45202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -2
Query: 474 SRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLL-PDNKRSKIEQMFELQH 307
+++ ISE L+ ++F L AR K WT +GK+ + D++ I + +L H
Sbjct: 123 NKIYISESLSPGNRELFKAALSARHDLKFKYIWTQNGKVFLRKNNDSQAVLISKSQDLLH 182
Query: 306 LKTK 295
LK +
Sbjct: 183 LKQR 186
>SB_39979| Best HMM Match : RVT_1 (HMM E-Value=4.6e-12)
Length = 792
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -2
Query: 474 SRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLL-PDNKRSKIEQMFELQH 307
+++ ISE L+ ++F L AR K WT +GK+ + D++ I + +L H
Sbjct: 123 NKIYISESLSPGNRELFKAALSARHDLKFKYIWTQNGKVFLRKNNDSQAVLISKSQDLLH 182
Query: 306 LKTK 295
LK +
Sbjct: 183 LKQR 186
>SB_57452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 106
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -2
Query: 474 SRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLL-PDNKRSKIEQMFELQH 307
+++ ISE L+ ++F L AR K WT +GK+ + D++ I + +L H
Sbjct: 27 NKIYISESLSPGNRELFKAELSARHDLKFKYIWTQNGKVFLRKNNDSQAVLISKSQDLLH 86
Query: 306 LKTK 295
LK +
Sbjct: 87 LKQR 90
>SB_936| Best HMM Match : DUF1127 (HMM E-Value=3.2)
Length = 280
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Frame = -2
Query: 474 SRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLL-PDNKRSKIEQMFELQH 307
+++ ISE L+ ++F L AR K WT +GK+ + D++ I + +L H
Sbjct: 201 NKIYISESLSPGNRELFKAALSARHDLKFKYIWTQNGKVFLRKNNDSQAVLISKSQDLLH 260
Query: 306 LKTK 295
LK +
Sbjct: 261 LKQR 264
>SB_48988| Best HMM Match : DUF1127 (HMM E-Value=1.5)
Length = 270
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 474 SRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLL-PDNKRSKIEQMFELQH 307
+++ ISE L+ ++F L AR K WT +GK+ + D + I + +L H
Sbjct: 191 NKIYISESLSPGNRELFKAALSARHDLKFKYIWTQNGKVFLRKNNDGQAVLISKSQDLLH 250
Query: 306 LKTK 295
LK +
Sbjct: 251 LKQR 254
>SB_30489| Best HMM Match : HEAT (HMM E-Value=9.2e-17)
Length = 722
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 283 SKSARSSSVIGKSHDEPKTAPKSAAER 203
SK ++ SSV KS PK++P S+ +R
Sbjct: 492 SKQSQKSSVTSKSSSSPKSSPSSSLQR 518
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 29.1 bits (62), Expect = 3.9
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Frame = -2
Query: 480 KGSRVIISEFLTKSRHDVFLEARSHFGVKRCWTTDGKIIVLLPDNKRSKI----EQMFEL 313
K + ++E LTK R D + + WT D I V L +K +I Q+ +L
Sbjct: 735 KKEKFRVNEDLTKGRLDAIKAINVKLDIYKLWTIDVTIQVRLNKDKAKEIIHSLRQLKDL 794
Query: 312 QHLKTKFPSAQKAQGAPQSLGNLMTNPRRHQNQRQ 208
Q L K + Q+ +L + P +QN +
Sbjct: 795 QQLIEKVLDTENQN--EQNTEHLNSMPFSNQNNNE 827
>SB_51958| Best HMM Match : TBC (HMM E-Value=0.00039)
Length = 491
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = -3
Query: 293 FPRLKKRKELLS--HWEIS*RTQDGTKISGRARNRQEDDSSK 174
F K E+LS H E+S D + R+RNR++D+SSK
Sbjct: 373 FEEALKLFEILSSQHLELSSIEADRERYKQRSRNREKDESSK 414
>SB_13857| Best HMM Match : Thymosin (HMM E-Value=1.8)
Length = 144
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 5/62 (8%)
Frame = -3
Query: 695 LLFHGIPESDATDPATAIVGILTNQMKVAG--CTEEDLTACYRLGS---NTNKPRPILVR 531
L+F+ + E DP + +L K ++ +RLG N +KPRP++ R
Sbjct: 74 LIFYNMNECAEEDPFAVVQKVLVTNFKFKDEEVNAIEIERAHRLGRRDPNKDKPRPLIAR 133
Query: 530 FL 525
L
Sbjct: 134 LL 135
>SB_39791| Best HMM Match : RVT_1 (HMM E-Value=0.083)
Length = 497
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -2
Query: 474 SRVIISEFLTKSRHDVF---LEARSHFGVKRCWTTDGKIIVLL-PDNKRSKIEQMFELQH 307
+++ ISE L+ ++F L AR K WT +GK+ + D++ I + + H
Sbjct: 150 NKIYISESLSPGNRELFKAALSARHDLKFKYIWTQNGKVFLRKNKDSQAVLISKSQDSLH 209
Query: 306 LKTK 295
LK +
Sbjct: 210 LKQR 213
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = -2
Query: 345 KRSKIEQMFELQHLKTKFPSAQKAQGAPQSLGNLMTNPRRHQNQRQSEKSARGRLVESSM 166
++ ++E EL HL+TK +K + +SL ++ + + Q E+ +E
Sbjct: 365 RKDRMEAKMELDHLRTKADRIRKLEQENESLSFVVETKSKFERQLSVERETLKTTLERES 424
Query: 165 A 163
A
Sbjct: 425 A 425
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,039,903
Number of Sequences: 59808
Number of extensions: 493538
Number of successful extensions: 1271
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1962001171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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