Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0217
         (733 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    25   1.8  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   5.6  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   5.6  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   5.6  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.7  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.7  

>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = -1

Query: 304 ENQVSLGSKSAR-----SSSVIGKSHDEPKTAPKSAAEREI 197
           ++Q   GSK +R     S + IGK+H   K  P+S+  + I
Sbjct: 211 KHQHEFGSKKSRLPLIRSLADIGKNHSSSKNMPRSSTSKSI 251


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 282 QKAQGAPQSL---GNLMTNPRRHQNQRQSEKSARGRLVESSMAVS*TY 148
           Q+ Q  PQ     G+     ++HQ Q+Q  K  +  L+E S   + T+
Sbjct: 351 QQQQRQPQRYVVAGSSQQQQQQHQQQQQKRKRPKPELIEISPGQNETF 398


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 518 RRCMKCGRTRHS*RVLGSSFQNF*P 444
           RRCM+ G T H    +  +F  F P
Sbjct: 245 RRCMRTGTTHHEADAIEQTFYCFDP 269


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 518 RRCMKCGRTRHS*RVLGSSFQNF*P 444
           RRCM+ G T H    +  +F  F P
Sbjct: 245 RRCMRTGTTHHEADAIEQTFYCFDP 269


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = -1

Query: 304  ENQVSLGSKSARSSS----VIGKSHDEPKTAPKSAAEREIGKRTT 182
            +   +LG  +  S+S    VI   HD P +A K        KRTT
Sbjct: 1203 KKDATLGGNATTSTSNEAHVIANGHDGPVSAGKPPQAPPKAKRTT 1247


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 414  RSHFGVKRCWTTDGKII 364
            R+HFG ++ WT D  +I
Sbjct: 1345 RNHFGKEKKWTFDKTLI 1361


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 775,620
Number of Sequences: 2352
Number of extensions: 16113
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)