Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0217
         (733 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027994-1|AAH27994.1|  605|Homo sapiens beta-transducin repeat ...    30   9.8  
AL627424-17|CAI41042.1|  605|Homo sapiens beta-transducin repeat...    30   9.8  
AL445463-2|CAI12963.1|  605|Homo sapiens beta-transducin repeat ...    30   9.8  
AL445463-1|CAI12962.1|  191|Homo sapiens beta-transducin repeat ...    30   9.8  
AL133387-1|CAH70020.1|  605|Homo sapiens beta-transducin repeat ...    30   9.8  
AF101784-1|AAD08702.1|  605|Homo sapiens b-TRCP variant E3RS-Ika...    30   9.8  

>BC027994-1|AAH27994.1|  605|Homo sapiens beta-transducin repeat
           containing protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 PRETWFSDAEVQTSVQSY-CVYYPGEGRLFSHLLSSSA*RRNESGPPKR 428
           PR  W   + +  S+ S  C+Y PG G L +   SS     N   PP++
Sbjct: 20  PRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRK 68


>AL627424-17|CAI41042.1|  605|Homo sapiens beta-transducin repeat
           containing protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 PRETWFSDAEVQTSVQSY-CVYYPGEGRLFSHLLSSSA*RRNESGPPKR 428
           PR  W   + +  S+ S  C+Y PG G L +   SS     N   PP++
Sbjct: 20  PRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRK 68


>AL445463-2|CAI12963.1|  605|Homo sapiens beta-transducin repeat
           containing protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 PRETWFSDAEVQTSVQSY-CVYYPGEGRLFSHLLSSSA*RRNESGPPKR 428
           PR  W   + +  S+ S  C+Y PG G L +   SS     N   PP++
Sbjct: 20  PRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRK 68


>AL445463-1|CAI12962.1|  191|Homo sapiens beta-transducin repeat
           containing protein.
          Length = 191

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 PRETWFSDAEVQTSVQSY-CVYYPGEGRLFSHLLSSSA*RRNESGPPKR 428
           PR  W   + +  S+ S  C+Y PG G L +   SS     N   PP++
Sbjct: 2   PRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRK 50


>AL133387-1|CAH70020.1|  605|Homo sapiens beta-transducin repeat
           containing protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 PRETWFSDAEVQTSVQSY-CVYYPGEGRLFSHLLSSSA*RRNESGPPKR 428
           PR  W   + +  S+ S  C+Y PG G L +   SS     N   PP++
Sbjct: 20  PRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRK 68


>AF101784-1|AAD08702.1|  605|Homo sapiens b-TRCP variant
           E3RS-IkappaB protein.
          Length = 605

 Score = 29.9 bits (64), Expect = 9.8
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 285 PRETWFSDAEVQTSVQSY-CVYYPGEGRLFSHLLSSSA*RRNESGPPKR 428
           PR  W   + +  S+ S  C+Y PG G L +   SS     N   PP++
Sbjct: 20  PRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDCNNGEPPRK 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,945,956
Number of Sequences: 237096
Number of extensions: 2410331
Number of successful extensions: 4380
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4377
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)