Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0215
(803 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 134 1e-32
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 94 2e-20
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 93 4e-20
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 91 1e-19
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 85 1e-17
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 81 1e-16
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 75 9e-15
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 75 1e-14
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 73 6e-14
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 71 3e-13
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 67 3e-12
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 60 4e-10
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 58 1e-09
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 58 1e-09
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 55 1e-08
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 54 2e-08
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 52 1e-07
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 51 2e-07
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 45 1e-05
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 44 3e-05
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 32 0.083
SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|ch... 29 1.0
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 28 1.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 3.1
SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces pomb... 27 4.1
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 27 4.1
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 27 4.1
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 26 7.2
SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase Lac... 25 9.5
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 25 9.5
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 134 bits (325), Expect = 1e-32
Identities = 65/90 (72%), Positives = 74/90 (82%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
DSTYEMVGGL+KQIKEIKEVIELPVKHPELF++LGI QPKG+LLYGPPG K +LARAVA
Sbjct: 141 DSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
HHT+C FIRV + K Y+GE + VR
Sbjct: 201 HHTDCKFIRVSGSELVQK--YIGEGSRMVR 228
Score = 133 bits (321), Expect = 3e-32
Identities = 62/85 (72%), Positives = 73/85 (85%)
Frame = +2
Query: 254 VREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRN 433
+REE+QLLQE GSYVGEV+K M K KVLVKVHPEGK+VVD+ ++DI ++ N RVALRN
Sbjct: 55 LREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRN 114
Query: 434 ESYTLHKILPNKVDPLVSLMMVEKV 508
+SY L KILPNKVDPLVSLMMVEK+
Sbjct: 115 DSYQLIKILPNKVDPLVSLMMVEKI 139
Score = 50.8 bits (116), Expect = 2e-07
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +3
Query: 132 EGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM 254
E YY KI++ +L + +K+QNLRRL+AQRN LNA+VR+
Sbjct: 14 ENIVQYYTQKIQDAELAILQKTQNLRRLEAQRNGLNARVRL 54
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 93.9 bits (223), Expect = 2e-20
Identities = 45/88 (51%), Positives = 61/88 (69%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PG K +LA+AVA+
Sbjct: 189 SYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 248
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
T TF+RV + K YLG+ VR
Sbjct: 249 TSATFLRVVGSELIQK--YLGDGPRLVR 274
Score = 28.7 bits (61), Expect = 1.0
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 296 VGEVVKPMDKKKVLVKVH-PEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKV 472
VG + + +D +V PE + V + VD + + C V L +++ ++ +L +
Sbjct: 116 VGTLEEIIDDDHAIVSTAGPE--YYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDT 173
Query: 473 DPLVSLMMVEKVRT 514
DP++++M ++K T
Sbjct: 174 DPMINVMKLDKAPT 187
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 93.1 bits (221), Expect = 4e-20
Identities = 48/93 (51%), Positives = 61/93 (65%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E D TY VGG +QI+ ++EV+ELP+ PE F LGI PKG++LYGPPG K + AR
Sbjct: 172 EKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCAR 231
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA+ T+ TFIRV + K Y+GE A VR
Sbjct: 232 AVANRTDATFIRVIGSELVQK--YVGEGARMVR 262
Score = 42.7 bits (96), Expect = 6e-05
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 260 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNES 439
EE L + + + E + +K ++ + KFVV L + V D+ RV
Sbjct: 91 EEQPLQVARCTKIIENEQSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNK 150
Query: 440 YTLHKILPNKVDPLVSLMMVEK 505
Y + LP K+DP V++M VE+
Sbjct: 151 YAIQLPLPPKIDPSVTMMQVEE 172
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 91.5 bits (217), Expect = 1e-19
Identities = 46/93 (49%), Positives = 65/93 (69%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
+ D ++ VGGL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPG K +LAR
Sbjct: 125 DPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLAR 184
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA F++V + + Y+GE+A +R
Sbjct: 185 AVAASLGVNFLKV--VSSAIVDKYIGESARIIR 215
Score = 60.5 bits (140), Expect = 3e-10
Identities = 29/81 (35%), Positives = 49/81 (60%)
Frame = +2
Query: 260 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNES 439
++++ LQ G +GEV+K +D ++ +VK ++VV NVD + + RV+L +
Sbjct: 44 DDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTT 103
Query: 440 YTLHKILPNKVDPLVSLMMVE 502
T+ +ILP +VDPLV M +E
Sbjct: 104 LTIMRILPREVDPLVYNMSIE 124
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 85.0 bits (201), Expect = 1e-17
Identities = 43/93 (46%), Positives = 60/93 (64%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E D +Y VGGLD Q +E++E +ELP+ +L+ +GI P+GVLLYGPPG K +L +
Sbjct: 127 ERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVK 186
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA+ T FIRV + + + + YLGE VR
Sbjct: 187 AVANSTAANFIRV--VGSEFVQKYLGEGPRMVR 217
Score = 34.3 bits (75), Expect = 0.021
Identities = 19/79 (24%), Positives = 40/79 (50%)
Frame = +2
Query: 257 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNE 436
+EE++ +Q +G+ ++ +D+ +V +VV + +D + + VAL+
Sbjct: 45 QEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRH 104
Query: 437 SYTLHKILPNKVDPLVSLM 493
S L ILP + D +S++
Sbjct: 105 SNALVDILPPEADSSISML 123
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 81.4 bits (192), Expect = 1e-16
Identities = 36/94 (38%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = +1
Query: 445 LTQNTTQQSRSSCVAHDGRES--ADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 618
++Q+T + + ES A+ Y+ +GG +Q+ +I+E++ELP++HP+LF ++GI
Sbjct: 196 VSQDTIIHWEGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGI 255
Query: 619 AQPKGVLLYGPPGHWKDILARAVAHHTECTFIRV 720
P+G+L+YGPPG K ++ARAVA+ T F +
Sbjct: 256 KPPRGILMYGPPGTGKTLMARAVANETGAFFFLI 289
Score = 64.5 bits (150), Expect = 2e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
+E +GGL++ +E++E +++PV + E F G+ KGVL +GPPG K +LA+A+A+
Sbjct: 496 WEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANEC 555
Query: 700 ECTFIRV 720
FI V
Sbjct: 556 SANFISV 562
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 75.4 bits (177), Expect = 9e-15
Identities = 38/97 (39%), Positives = 58/97 (59%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E Y +GGL KQI+E+ E I LP++ + F LG+ PKG L++GPPG K +LAR
Sbjct: 178 EKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPGTGKTLLAR 237
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
A A + TF+++ Q + ++G+ A+ VR A +
Sbjct: 238 ACAAQSNATFLKLAAPQ--LVQMFIGDGAKLVRDAFA 272
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 74.9 bits (176), Expect = 1e-14
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1
Query: 448 TQNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP 627
TQ+ Q DG SA T+ +GGL QI +I++++ELP ++PELF I P
Sbjct: 255 TQSAYNQGSEETQNFDGPPSA-VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPP 313
Query: 628 KGVLLYGPPGHWKDILARAVA 690
+GVLLYGPPG K ++ RAVA
Sbjct: 314 RGVLLYGPPGTGKTMVMRAVA 334
Score = 70.1 bits (164), Expect = 3e-13
Identities = 40/103 (38%), Positives = 59/103 (57%)
Frame = +1
Query: 472 RSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 651
R S + ES + + +GG ++ +++KE +E P+ H E F LG+ PKGVLLYGP
Sbjct: 531 RQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGP 590
Query: 652 PGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
PG K I A+A+A T FI V + + K ++GE+ VR
Sbjct: 591 PGCSKTITAKAIATETGLNFIAVKGPELFDK--FVGESERAVR 631
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 72.5 bits (170), Expect = 6e-14
Identities = 39/105 (37%), Positives = 57/105 (54%)
Frame = +1
Query: 406 GQLSCRSSQRKLYLTQNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPV 585
GQ S S ++ T R A+ S D + +GGLD I E+ E++ +P+
Sbjct: 136 GQESITGSAKRKDRRSKTNGSKRQKAEANREPPS-DISLSDIGGLDDCINELLELVAMPI 194
Query: 586 KHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECTFIRV 720
KHPE++ GI P+GVLL+GPPG K +LA A+A+ FI +
Sbjct: 195 KHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISI 239
Score = 64.9 bits (151), Expect = 1e-11
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
++ +G L E++ I P+K PEL+ ++GI+ P GVLL+GPPG K +LA+AVA+
Sbjct: 490 SWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANE 549
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
++ FI + + K Y+GE+ VR
Sbjct: 550 SKANFISIRGPELLNK--YVGESERAVR 575
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 70.5 bits (165), Expect = 3e-13
Identities = 30/72 (41%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG--IAQPKGVLLYGPPGHWKDILARA 684
D +++ +GG+D+ + ++ + + P+K+PE+FD G ++ PKG+LLYGPPG K +LA+A
Sbjct: 85 DVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKA 144
Query: 685 VAHHTECTFIRV 720
+A ++ TFI V
Sbjct: 145 LAKQSQATFINV 156
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 66.9 bits (156), Expect = 3e-12
Identities = 27/58 (46%), Positives = 42/58 (72%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
++E VGGLD I ++KE++ LP+ +PE+F + P+GVL +GPPG K ++ARA+A
Sbjct: 264 SFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALA 321
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 60.1 bits (139), Expect = 4e-10
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +1
Query: 499 RESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILA 678
RE+ D + +GGL+ I ++KE++ LP+ +PE+F L I P+GVL +GPPG K ++A
Sbjct: 366 RENLD--FNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMA 423
Query: 679 RAVA 690
R +A
Sbjct: 424 RVLA 427
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 58.4 bits (135), Expect = 1e-09
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +1
Query: 412 LSCRSSQRKLYLTQNTTQQSRSSCVAHDGRESADSTY-EMVGGLDKQIKEIKEVIELPVK 588
+S ++Q+ L Q T + ++ + + Y + GLD +KE + P
Sbjct: 341 ISASTTQQTEPLQQTTPSSDFEYAIMNEIISNHEPVYWSDIAGLDDAKNSLKEAVIYPFL 400
Query: 589 HPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEA 765
PELF G+ +P +G+LL+GPPG K +LARAVA + TF + K YLG++
Sbjct: 401 RPELFQ--GLREPVQGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSK--YLGDS 456
Query: 766 AEWVR 780
+ VR
Sbjct: 457 EKLVR 461
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 58.0 bits (134), Expect = 1e-09
Identities = 31/87 (35%), Positives = 51/87 (58%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ +GGL++ +++ ++LP++ PELF G+ GVLLYGPPG K +LA+AVA
Sbjct: 654 WDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATEL 712
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F+ + + Y+GE+ VR
Sbjct: 713 SLEFVSIKGPE--LLNMYVGESEANVR 737
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 55.2 bits (127), Expect = 1e-08
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
V G+D+ +E++E+++ ++ P F LG P+GVLL GPPG K +LARAVA
Sbjct: 269 VQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVP 327
Query: 709 FIRVFWIQNWYKKFYLGEAAEWVR 780
F F + + + Y+G A+ VR
Sbjct: 328 FF--FMSGSQFDEMYVGVGAKRVR 349
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 54.4 bits (125), Expect = 2e-08
Identities = 28/73 (38%), Positives = 41/73 (56%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E + ++ + GL+ + +KE + LP+K P+LF G G+LLYGPPG K LA+
Sbjct: 122 EKPNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPGTGKSYLAK 180
Query: 682 AVAHHTECTFIRV 720
AVA TF +
Sbjct: 181 AVATEAGSTFFSI 193
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 52.0 bits (119), Expect = 1e-07
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHH 696
++ + GL+ +KE + P P+LF G+ +P +G+LL+GPPG K +LARAVA
Sbjct: 458 WDDISGLEFAKHSLKEAVVYPFLRPDLFQ--GLREPARGMLLFGPPGTGKTMLARAVATE 515
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
+ F + + KF LGE+ + VR
Sbjct: 516 SRSVFFSIS-ASSLTSKF-LGESEKLVR 541
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 50.8 bits (116), Expect = 2e-07
Identities = 24/64 (37%), Positives = 39/64 (60%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
V G+D+ +EI E ++ +K+P+ ++ LG P+G +L GPPG K +LA+A A
Sbjct: 298 VAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVP 356
Query: 709 FIRV 720
F+ V
Sbjct: 357 FLSV 360
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 45.2 bits (102), Expect = 1e-05
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
+ G+ + + ++++IE PVK+ ++ + P G+LL+G PG K LA A++
Sbjct: 608 IAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPVQ 667
Query: 709 FIRVFWIQNWYKKFYLGEAAEWVRXALS 792
FI + + K Y+G++ + VR S
Sbjct: 668 FISIKGPELLDK--YIGKSEQGVRDLFS 693
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 44.0 bits (99), Expect = 3e-05
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 529 VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAV 687
+GGLD + I + + P + + LGI KG+LLYGPPG K ++AR +
Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQI 324
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 32.3 bits (70), Expect = 0.083
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 538 LDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
L+ +K+ I + + +++ + +D GI +G LLYGPPG K A+A
Sbjct: 212 LESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALA 263
>SPAC3H1.05 |||CAAX prenyl protease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 474
Score = 28.7 bits (61), Expect = 1.0
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 532 GGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDIL-ARAVAHHTECT 708
G L QI+E+ I P+K + DA + YG P + +L V +HTE
Sbjct: 266 GSLRTQIEELAASINFPLKKLYVIDASRRSTHSNAFFYGLPWNKGIVLFDTLVKNHTEPE 325
Query: 709 FIRVFW--IQNWY 741
I + + +WY
Sbjct: 326 LIAILGHELGHWY 338
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 27.9 bits (59), Expect = 1.8
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 287 PVLARAEAPRVHTNFSVEFITLGLKTTKIL 198
P++ P NFSVEF L L TT IL
Sbjct: 366 PIVPCITNPEAAENFSVEFTKLPLSTTPIL 395
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 245 SSYVREELQLLQEQGSYVGEVVK-PMDKKKVLVKVHPEGKFVVDLDKNV 388
SS V+EE+ L+QE+ + V ++ D KV K+ + V DL+K +
Sbjct: 186 SSRVKEEI-LVQEKSALVSDLASLQSDHSKVCEKLEVSSRQVQDLEKKL 233
>SPAC56F8.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/54 (20%), Positives = 28/54 (51%)
Frame = +1
Query: 418 CRSSQRKLYLTQNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIEL 579
CR +R+ ++++ + +S + + +YE +G +K++KE +E+
Sbjct: 331 CRQRKRRTTISRDNSTRSTWGIGSEHDMQCLPPSYETMGPCEKEMKEETNEVEI 384
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.6 bits (56), Expect = 4.1
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 402 TSLISTFLSKSTTNLPSG*TFTRTFFLSIGLTT 304
TS+IS+ S S T++PS + +FF + G T+
Sbjct: 822 TSIISSIASSSYTSIPSISSIASSFFDASGFTS 854
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +1
Query: 736 WYKKFYLGE 762
WYKKFYLGE
Sbjct: 933 WYKKFYLGE 941
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 165 EELQLIVAEKSQNLRRLQAQ 224
EEL+LI K ++ RRLQAQ
Sbjct: 275 EELELIAERKRESGRRLQAQ 294
>SPBC3E7.15c |mug83|SPBC4F6.02c|sphingosine N-acyltransferase
Lac1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 739 YKKFYLGEAAEWVRXAL 789
+K FYL EAA W++ AL
Sbjct: 193 FKAFYLIEAAYWIQQAL 209
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +2
Query: 428 RNESYTLHKILPNKVDPLVSLMMVEKVRTLLTKW 529
++E YT PNK +S + E++ L K+
Sbjct: 254 KDEKYTFELTFPNKPAETISTLQAEEIVALTAKY 287
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,199,822
Number of Sequences: 5004
Number of extensions: 63851
Number of successful extensions: 214
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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