Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0215
(803 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.) 140 9e-34
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 95 4e-20
SB_3774| Best HMM Match : DivIC (HMM E-Value=4.4) 93 2e-19
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 92 6e-19
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 6e-19
SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 3e-14
SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 2e-13
SB_19460| Best HMM Match : AAA (HMM E-Value=0) 73 2e-13
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 71 1e-12
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 69 3e-12
SB_45627| Best HMM Match : AAA (HMM E-Value=0) 68 1e-11
SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 58 6e-09
SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_49367| Best HMM Match : AAA (HMM E-Value=0) 51 1e-06
SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_7424| Best HMM Match : AAA (HMM E-Value=0) 47 2e-05
SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_3115| Best HMM Match : AAA (HMM E-Value=0) 45 6e-05
SB_55690| Best HMM Match : AAA (HMM E-Value=0) 43 3e-04
SB_732| Best HMM Match : AAA (HMM E-Value=0) 36 0.029
SB_28977| Best HMM Match : AAA (HMM E-Value=0) 34 0.16
SB_30757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_1586| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25) 30 2.5
SB_33932| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19) 30 2.5
SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.5
SB_2234| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19) 30 2.5
SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24) 29 3.3
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_46732| Best HMM Match : AAA (HMM E-Value=0.044) 29 4.4
SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.8
SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0) 29 5.8
SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_31840| Best HMM Match : RuvA_N (HMM E-Value=5.6) 28 7.7
SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12) 28 7.7
SB_22720| Best HMM Match : KID (HMM E-Value=0.0014) 28 7.7
SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037) 28 7.7
SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_3919| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 442
Score = 140 bits (340), Expect = 9e-34
Identities = 70/90 (77%), Positives = 75/90 (83%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
DSTYEMVGGLDKQIKEIKEVIELPVKHPELF+ALGI QPKGVLLYGPPG K +LARAVA
Sbjct: 173 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFEALGIDQPKGVLLYGPPGTGKTLLARAVA 232
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
HHTECTFIRV + K ++GE A VR
Sbjct: 233 HHTECTFIRVSGSELVQK--FIGEGARMVR 260
Score = 95.5 bits (227), Expect = 4e-20
Identities = 55/85 (64%), Positives = 60/85 (70%)
Frame = +2
Query: 254 VREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRN 433
+REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DK +D+ +
Sbjct: 110 LREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGIDMAE----------- 158
Query: 434 ESYTLHKILPNKVDPLVSLMMVEKV 508
VDPLVSLMMVEKV
Sbjct: 159 ------------VDPLVSLMMVEKV 171
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +3
Query: 171 LQLIVAEKSQNLRRLQAQRNELNAKVRM 254
++L+V EK +NLRRL+AQRNELNAKVRM
Sbjct: 82 VKLVVTEKIKNLRRLEAQRNELNAKVRM 109
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 95.5 bits (227), Expect = 4e-20
Identities = 48/105 (45%), Positives = 67/105 (63%)
Frame = +1
Query: 466 QSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLY 645
++ SS E + +Y +GG+D Q +EI+E +ELP+ H EL+ +GI P+GVLLY
Sbjct: 145 EADSSIAMLTNEEKPNVSYAEIGGMDIQKQEIREAVELPLTHFELYKQIGIDPPRGVLLY 204
Query: 646 GPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
GPPG K +LA+AVAHHT FIRV + + + + YLGE VR
Sbjct: 205 GPPGCGKTMLAKAVAHHTTAAFIRV--VGSEFVQKYLGEGPRMVR 247
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/85 (21%), Positives = 41/85 (48%)
Frame = +2
Query: 251 YVREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALR 430
+ +EE++ +Q +G+ ++ +D+ +V + V + +D + + VAL
Sbjct: 73 HAQEEVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLKPSASVALH 132
Query: 431 NESYTLHKILPNKVDPLVSLMMVEK 505
S L ILP + D ++++ E+
Sbjct: 133 KHSNALVDILPPEADSSIAMLTNEE 157
>SB_3774| Best HMM Match : DivIC (HMM E-Value=4.4)
Length = 158
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = +2
Query: 254 VREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDI 394
+REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVD+DK +D+
Sbjct: 110 LREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDIDKGIDM 156
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +3
Query: 171 LQLIVAEKSQNLRRLQAQRNELNAKVRM 254
++L+V EK +NLRRL+AQRNELNAKVRM
Sbjct: 82 VKLVVTEKIKNLRRLEAQRNELNAKVRM 109
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 91.9 bits (218), Expect = 6e-19
Identities = 47/93 (50%), Positives = 60/93 (64%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E D TY +GG +QI +++EV+E P+ HPE F LGI PKGVLL+GPPG K + AR
Sbjct: 77 EKPDVTYSDIGGCKEQIDKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCAR 136
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA+ T+ FIRV + K Y+GE A VR
Sbjct: 137 AVANRTDACFIRVIGSELVQK--YVGEGARMVR 167
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 91.9 bits (218), Expect = 6e-19
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
++ +Y +GGLD QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PG K +LA+
Sbjct: 373 KAPQESYADIGGLDTQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGQPGTGKTLLAK 432
Query: 682 AVAHHTECTFIRV 720
AVA+ T TF+RV
Sbjct: 433 AVANQTSATFLRV 445
Score = 31.9 bits (69), Expect = 0.63
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = +2
Query: 296 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 475
VG + + +D +V + V + VD + + C V L ++ + + +L + D
Sbjct: 304 VGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDAD 363
Query: 476 PLVSLMMVEK 505
P+V++M +EK
Sbjct: 364 PMVTVMKLEK 373
>SB_14682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 802
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +1
Query: 478 SCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 657
S + D +++ +GGL QI+ ++E+IE+P+ +PELF A G+ P+G+LLYGP G
Sbjct: 241 SVIKKDSEAKKGVSFQSIGGLKTQIQAVREMIEMPLTNPELFTAYGVPPPRGILLYGPSG 300
Query: 658 HWKDILARAVAHHTECTF 711
K ++ARAVA+ T F
Sbjct: 301 TGKTMIARAVANETGVHF 318
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/84 (41%), Positives = 55/84 (65%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
VGG + +++KE +E P+KHPE F LGI P+G+L+YGPPG K ++ARA+A +
Sbjct: 539 VGGNEMIKRKLKEAVEWPLKHPEAFQRLGIRPPRGILMYGPPGCSKTLIARALATESGLN 598
Query: 709 FIRVFWIQNWYKKFYLGEAAEWVR 780
FI + + + K ++GE+ + VR
Sbjct: 599 FIAIKGPELFSK--WVGESEKAVR 620
>SB_37200| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 908
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ VGGL+ + +++ IE P+ HPE F +G+ +P+GVLLYGPPG K L RA A T
Sbjct: 483 WDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASST 542
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVR 780
CTF+ + Q + Y+G+A +R
Sbjct: 543 HCTFMSLSCAQLF--SSYVGDAERTLR 567
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 505 SADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDIL 675
S DS ++ GLD IK +KE+++ P+ +PE F LGI PKG+LL G PG K +L
Sbjct: 205 SVDSGNIILSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 261
>SB_19460| Best HMM Match : AAA (HMM E-Value=0)
Length = 340
Score = 73.3 bits (172), Expect = 2e-13
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ VGGL+ + +++ IE P+ HPE F +G+ +P+GVLLYGPPG K L RA A T
Sbjct: 12 WDDVGGLEGVKQALRQAIEWPLLHPEAFARMGLRRPRGVLLYGPPGCCKTTLVRAAASST 71
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVR 780
CTF+ + Q + Y+G+A +R
Sbjct: 72 HCTFMSLSCAQLF--SSYVGDAERTLR 96
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/47 (63%), Positives = 39/47 (82%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPG 657
+Y VGGL +QI+E++EVIELP+ +PELF +GIA PKG LL+GPPG
Sbjct: 133 SYSDVGGLSEQIRELREVIELPLTNPELFQRVGIAPPKGCLLFGPPG 179
Score = 52.8 bits (121), Expect = 3e-07
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 263 ELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESY 442
+L+ LQ G VGEV+K + ++K +VK ++VV + VD + RVAL +
Sbjct: 48 DLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQVDKAKLKQGTRVALDMTTL 107
Query: 443 TLHKILPNKVDPLVSLMMVE 502
T+ + LP +VDPLV M E
Sbjct: 108 TIMRYLPREVDPLVYNMSHE 127
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/63 (49%), Positives = 47/63 (74%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ VGGL+KQI+ +KE+I P+ +PE+FD I P+GVL +GPPG K ++ARA+A+
Sbjct: 883 FDSVGGLNKQIQALKEMILFPLVYPEVFDKFKITPPRGVLFFGPPGTGKTLVARALAN-- 940
Query: 700 ECT 708
EC+
Sbjct: 941 ECS 943
>SB_45627| Best HMM Match : AAA (HMM E-Value=0)
Length = 628
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/73 (38%), Positives = 49/73 (67%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E + +++ +GGL+ +E++E+++ PV+HP+ F G+ KGVL YGPPG K +LA+
Sbjct: 303 EVPNVSWDDIGGLEGVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 362
Query: 682 AVAHHTECTFIRV 720
A+A+ + FI +
Sbjct: 363 AIANECQANFISI 375
>SB_40956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1086
Score = 66.1 bits (154), Expect = 3e-11
Identities = 39/94 (41%), Positives = 57/94 (60%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
D +++ VGGLD +EI + I+LP+ HPELF A G+ + GVLLYGPPG K ++A+AVA
Sbjct: 808 DISWKDVGGLDSVKEEILDTIQLPLLHPELF-AAGLRR-SGVLLYGPPGTGKTLMAKAVA 865
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
F+ V + Y+G++ + VR S
Sbjct: 866 TECSLNFLSVKGPE--LINMYVGQSEQNVREVFS 897
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/67 (44%), Positives = 41/67 (61%)
Frame = +1
Query: 580 PVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLG 759
PV+HPE F ALG+ P G+LL GPPG K +LA+A+A+ + FI V + Y+G
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISVKGPE--LLNMYVG 59
Query: 760 EAAEWVR 780
E+ VR
Sbjct: 60 ESERAVR 66
>SB_33907| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 56
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +1
Query: 580 PVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECTFIRV 720
PV+HPE F ALG+ P G+LL GPPG K +LA+A+A+ + FI V
Sbjct: 2 PVQHPEEFSALGLTHPPGILLAGPPGCGKTLLAKAIANESGINFISV 48
>SB_30385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 505 SADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDIL 675
S DS ++ GLD IK +KE+++ P+ +PE F LGI PKG+LL G PG K +L
Sbjct: 35 SVDSGNIILSGLDDSIKMLKELVQFPLYYPESFSHLGINGPKGILLVGAPGVGKTLL 91
>SB_49367| Best HMM Match : AAA (HMM E-Value=0)
Length = 976
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/64 (34%), Positives = 40/64 (62%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
+GG ++++ +++ + + HPE+F LG+ G LL+GPPG K +LA A+A E
Sbjct: 679 IGGCSNTLEQVGKLL-VHMCHPEVFTTLGVTPTTGFLLHGPPGCGKTLLAHAIAGELEMP 737
Query: 709 FIRV 720
F+++
Sbjct: 738 FLKL 741
>SB_35704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 256
Score = 48.4 bits (110), Expect = 7e-06
Identities = 30/81 (37%), Positives = 46/81 (56%)
Frame = +1
Query: 538 LDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECTFIR 717
+D+ +E++EV+E +++PE F LG P GVLL G PG K +LA+AVA F
Sbjct: 136 VDEAKEELQEVVEF-LRNPEKFKRLGGKLPTGVLLIGSPGTGKTLLAKAVAGEAGVPFF- 193
Query: 718 VFWIQNWYKKFYLGEAAEWVR 780
F + + + ++G A VR
Sbjct: 194 -FCSGSEFDEMFVGVGAARVR 213
>SB_7424| Best HMM Match : AAA (HMM E-Value=0)
Length = 294
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
+S + V G ++ EI E + +K+P+ + LG PKG +L GPPG K +LA+AVA
Sbjct: 44 ESEWIDVAGCEEAKLEIMEFVNF-LKNPQQYHELGAKIPKGAILSGPPGTGKTLLAKAVA 102
Query: 691 HHTECTFIRV 720
F+ +
Sbjct: 103 GEAGVPFLSI 112
>SB_56202| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 46.8 bits (106), Expect = 2e-05
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHHTEC 705
+ L + K ++E + LP+ P+ F GI +P +GVL+ GPPG K +LA+AVA
Sbjct: 252 IADLHEAKKLLEEAVVLPLLMPDYFQ--GIRRPWRGVLMVGPPGTGKTMLAKAVATECGT 309
Query: 706 TFIRVFWIQNWYKKFYLGEAAEWVR 780
TF V + Y GE+ + VR
Sbjct: 310 TFFNV--SSSTLTSKYRGESEKLVR 332
>SB_3115| Best HMM Match : AAA (HMM E-Value=0)
Length = 913
Score = 45.2 bits (102), Expect = 6e-05
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
+ + ++ V G+ + E+ E ++ +K + LG PKG LL GPPG K +LA+
Sbjct: 118 DKGSARFKDVAGMQEAKMEVMEFVDY-LKSAGRYTQLGAKIPKGALLVGPPGTGKTLLAK 176
Query: 682 AVAHHTECTFI 714
AVA + F+
Sbjct: 177 AVATEADVPFL 187
>SB_55690| Best HMM Match : AAA (HMM E-Value=0)
Length = 1031
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/87 (34%), Positives = 42/87 (48%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
+E VGGL ++E + P K LF + G+LLYGPPG K +LA VA
Sbjct: 666 WENVGGLGPVKGVLQETLLWPSKFAGLFAKCPLRLRGGLLLYGPPGTGKTLLAGVVAKEC 725
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVR 780
FI + + K Y+G + + VR
Sbjct: 726 GLNFISIKGPELLSK--YIGASEQAVR 750
>SB_732| Best HMM Match : AAA (HMM E-Value=0)
Length = 388
Score = 36.3 bits (80), Expect = 0.029
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 595 ELFDALGIAQPKGVLLYGPPGHWKDILARAV 687
++ D +G+ KG+LL+GPPG K ++AR +
Sbjct: 172 DVVDKMGLKHVKGILLFGPPGTGKTLMARQI 202
>SB_28977| Best HMM Match : AAA (HMM E-Value=0)
Length = 442
Score = 33.9 bits (74), Expect = 0.16
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYG 648
E + + + GL+ + +KE + LP+K P LF G P +G+LLYG
Sbjct: 90 EKPNVKWSDIAGLESAKEALKEAVILPIKFPHLF--TGKRTPWRGILLYG 137
>SB_30757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 32.3 bits (70), Expect = 0.47
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = +1
Query: 400 CHGQLSCRSSQRKLYLTQNTTQQSRSSCV 486
CH LSC SQR L Q Q+SR CV
Sbjct: 114 CHVGLSCLKSQRTLRALQKALQRSRVECV 142
>SB_1586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 290 IPVLARAEAPRVHTNFSVEFITLGLKTTKILRFFGDNEL*LFNL-GYVVRAKTLTLHRVH 114
IP+ E+ R H + E +TLG T + +G L LF + G ++R L ++H
Sbjct: 128 IPLGRVVESSRAHKMCNYEGLTLGYAVTAFVLLYGFPVLFLFFVNGSIIRTARSHLKQIH 187
Query: 113 FHFSRESHIALLT 75
S I + T
Sbjct: 188 DQEMAASRITIAT 200
>SB_31892| Best HMM Match : AAA (HMM E-Value=6.2e-25)
Length = 420
Score = 29.9 bits (64), Expect = 2.5
Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 538 LDKQIKE--IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
LD+ I E + +V E + P + GI +G LLYGPPG K +A+A
Sbjct: 192 LDEGIAEGILADVKEF-IGSPRWYMDRGIPYRRGYLLYGPPGCGKSSFIQALA 243
>SB_33932| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19)
Length = 541
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 389 DINDVTANCRVALRNESYTLHKILPNKVDPL 481
DI ++ C+VA E +TL + LPN +D L
Sbjct: 154 DIRPISLTCQVAKLMEGFTLSRALPNILDRL 184
>SB_16447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 389 DINDVTANCRVALRNESYTLHKILPNKVDPL 481
DI ++ C+VA E +TL + LPN +D L
Sbjct: 525 DIRPISLTCQVAKLMEGFTLSRALPNILDRL 555
>SB_2234| Best HMM Match : RVT_1 (HMM E-Value=1.3e-19)
Length = 476
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 389 DINDVTANCRVALRNESYTLHKILPNKVDPL 481
DI ++ C+VA E +TL + LPN +D L
Sbjct: 89 DIRPISLTCQVAKLMEGFTLSRALPNILDRL 119
>SB_56096| Best HMM Match : fn3 (HMM E-Value=1.3e-24)
Length = 1065
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 377 DKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 481
D N+ + + +CR A+ E+++ H PN VDPL
Sbjct: 215 DCNLQLTCLQPSCRYAVLVEAFSSHPNDPNAVDPL 249
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 69 HESQ*RNMTLTTKMEVDTVKGEGFRPYYITKIEELQLIVAEKSQNLRRLQ 218
HE+Q R + LT E KG+ F KI+ELQ V + +Q ++ L+
Sbjct: 123 HEAQRREVVLTKDYERAVEKGDNF----YAKIDELQEKVDDTTQKIKLLE 168
>SB_46732| Best HMM Match : AAA (HMM E-Value=0.044)
Length = 430
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 628 KGVLLYGPPGHWKDILARAVAHHT 699
+ +L YGPPG K + A+++A H+
Sbjct: 330 RNLLFYGPPGTGKTMFAKSLARHS 353
>SB_41383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1995
Score = 28.7 bits (61), Expect = 5.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 156 TKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMYAR-SFSSCKN 284
+K Q+I +Q RLQ EL AK+R Y R S+SS N
Sbjct: 874 SKTARKQVIAERIAQEKARLQILEKELAAKLRDYGRNSYSSSTN 917
>SB_41460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1669
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +2
Query: 389 DINDVTANCRVALRNESYTLHKILP---NKVDP 478
DI + C+VA E +TL++ILP K+DP
Sbjct: 1274 DIRPIALTCQVAKVMEGFTLNRILPPIMRKLDP 1306
>SB_12803| Best HMM Match : Lig_chan (HMM E-Value=0)
Length = 1001
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = -2
Query: 487 RHKRIDFVG*YFV*GIAFVAKSDTTIGRDIVNINVLV 377
R + IDF Y GI +A++DTT+G +VN++ ++
Sbjct: 390 RSRVIDFSSPYGEVGIGILARTDTTLG-SVVNMDFMI 425
>SB_58879| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1786
Score = 28.3 bits (60), Expect = 7.7
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 302 EVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDPL 481
+ V P+ K + VHP K D+ ++ C++A E +TL ++LP+ ++ L
Sbjct: 309 DFVPPLLKSAI---VHPISKQTPPKSIKDDLRPISLTCQMAKICEGFTLIRVLPSVLEQL 365
>SB_31840| Best HMM Match : RuvA_N (HMM E-Value=5.6)
Length = 895
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 172 YSSLSPKN-LKIFVVFKPSV-MNSTLKFVCTRGASALARTGIVRRRSG 309
YS+L P+N LKIF+ KP N +L C+ ++ R RR+G
Sbjct: 418 YSALHPRNLLKIFI--KPHADANCSLSRGCSEASTRCLRVSFSNRRAG 463
>SB_31382| Best HMM Match : RVT_1 (HMM E-Value=2.2e-12)
Length = 1799
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 389 DINDVTANCRVALRNESYTLHKILPNKVDPL 481
DI ++ C+VA E TL + LPN +D L
Sbjct: 473 DIRPISLTCQVAKLMEGLTLSRALPNILDRL 503
>SB_22720| Best HMM Match : KID (HMM E-Value=0.0014)
Length = 847
Score = 28.3 bits (60), Expect = 7.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 165 EELQLIVAEKSQNLRRLQAQRNELNAKVRMYARSFSSCKNRD 290
E+L +K + ++RLQ + +E+ V M A S KNRD
Sbjct: 373 EKLSKNNKQKDEKIQRLQERLDEVQDAVNMNANLNKSLKNRD 414
>SB_10355| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0037)
Length = 1127
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 162 IEELQLIVAEKSQNLRRLQAQRNELNAKVRMYARSFSSCKNRDRT 296
I +L+ + N+R L+A NELN+K+ Y + + + +T
Sbjct: 389 IGKLEATKLSQETNIRSLKANINELNSKLSKYEGDYEELEKQYKT 433
>SB_55819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2408
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -1
Query: 161 LGYVVRAKTLTLHRVHFHFSRESHI 87
LG + RA+T+ LHR SRE H+
Sbjct: 118 LGELERAQTVLLHRASSRHSREEHV 142
>SB_3946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 389 DINDVTANCRVALRNESYTLHKILPNKVDPL 481
DI ++ C+VA E TL + LPN +D L
Sbjct: 511 DIRPISLTCQVAKLMEGLTLSRALPNILDRL 541
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,991,795
Number of Sequences: 59808
Number of extensions: 477436
Number of successful extensions: 1231
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2227723674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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