Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0215
(803 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit, puta... 137 7e-33
At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a) 137 7e-33
At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1... 96 2e-20
At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit, puta... 96 3e-20
At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3... 93 1e-19
At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2... 93 2e-19
At2g20140.1 68415.m02353 26S protease regulatory complex subunit... 93 2e-19
At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4... 89 4e-18
At1g45000.1 68414.m05158 26S proteasome regulatory complex subun... 89 4e-18
At1g09100.1 68414.m01016 26S protease regulatory subunit 6A, put... 89 4e-18
At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5... 88 6e-18
At5g03340.1 68418.m00286 cell division cycle protein 48, putativ... 85 5e-17
At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)... 85 5e-17
At3g53230.1 68416.m05865 cell division cycle protein 48, putativ... 85 7e-17
At4g24860.1 68417.m03559 AAA-type ATPase family protein contains... 66 3e-11
At5g53540.1 68418.m06653 MSP1 protein, putative / intramitochond... 65 4e-11
At4g02480.1 68417.m00335 AAA-type ATPase family protein contains... 64 1e-10
At3g56690.1 68416.m06306 calmodulin-binding protein identical to... 63 2e-10
At1g05910.1 68414.m00620 cell division cycle protein 48-related ... 62 4e-10
At4g27680.1 68417.m03980 MSP1 protein, putative / intramitochond... 62 6e-10
At2g03670.1 68415.m00326 AAA-type ATPase family protein contains... 61 1e-09
At1g64110.2 68414.m07264 AAA-type ATPase family protein contains... 61 1e-09
At1g64110.1 68414.m07263 AAA-type ATPase family protein contains... 61 1e-09
At5g58870.1 68418.m07376 FtsH protease, putative contains simila... 60 2e-09
At5g15250.1 68418.m01786 FtsH protease, putative similar to FtsH... 60 2e-09
At4g28000.1 68417.m04016 AAA-type ATPase family protein contains... 60 2e-09
At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc ... 60 2e-09
At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc... 60 2e-09
At1g02890.1 68414.m00256 AAA-type ATPase family protein contains... 59 3e-09
At2g34560.2 68415.m04246 katanin, putative similar to katanin p6... 59 4e-09
At2g34560.1 68415.m04245 katanin, putative similar to katanin p6... 59 4e-09
At4g23940.1 68417.m03443 FtsH protease, putative contains simila... 58 5e-09
At1g03000.1 68414.m00271 AAA-type ATPase family protein contains... 58 5e-09
At1g50140.1 68414.m05623 AAA-type ATPase family protein contains... 58 7e-09
At3g47060.1 68416.m05110 FtsH protease, putative contains simila... 58 9e-09
At3g19740.1 68416.m02499 AAA-type ATPase family protein contains... 57 2e-08
At3g01610.1 68416.m00092 AAA-type ATPase family protein contains... 57 2e-08
At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH... 55 5e-08
At3g15120.1 68416.m01913 AAA-type ATPase family protein contains... 55 5e-08
At1g50250.1 68414.m05634 cell division protein ftsH homolog 1, c... 54 1e-07
At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuol... 53 2e-07
At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1... 53 2e-07
At2g45500.1 68415.m05659 AAA-type ATPase family protein similar ... 53 3e-07
At5g53170.1 68418.m06610 FtsH protease, putative similar to ATP-... 52 3e-07
At2g26140.1 68415.m03137 FtsH protease, putative contains simila... 52 3e-07
At3g16290.1 68416.m02056 FtsH protease, putative contains simila... 51 1e-06
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 50 1e-06
At2g29080.1 68415.m03535 FtsH protease, putative similar to AAA-... 50 1e-06
At1g62130.1 68414.m07010 AAA-type ATPase family protein contains... 50 2e-06
At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1) id... 50 2e-06
At1g07510.1 68414.m00804 FtsH protease, putative similar to AAA-... 48 1e-05
At3g27120.1 68416.m03393 spastin ATPase, putative similar to SWI... 46 4e-05
At3g02450.1 68416.m00232 cell division protein ftsH, putative si... 44 9e-05
At5g17760.2 68418.m02083 AAA-type ATPase family protein contains... 41 8e-04
At5g17760.1 68418.m02082 AAA-type ATPase family protein contains... 41 8e-04
At3g50930.1 68416.m05576 AAA-type ATPase family protein contains... 41 0.001
At4g04910.1 68417.m00714 AAA-type ATPase family protein similar ... 40 0.002
At4g04180.1 68417.m00593 AAA-type ATPase family protein contains... 39 0.003
At3g50940.1 68416.m05577 AAA-type ATPase family protein contains... 39 0.003
At2g18193.1 68415.m02117 AAA-type ATPase family protein contains... 39 0.004
At3g28580.1 68416.m03568 AAA-type ATPase family protein contains... 38 0.006
At2g18190.1 68415.m02116 AAA-type ATPase family protein contains... 38 0.006
At1g43910.1 68414.m05066 AAA-type ATPase family protein contains... 38 0.010
At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1, ... 36 0.031
At4g30250.1 68417.m04301 AAA-type ATPase family protein contains... 35 0.055
At1g08270.2 68414.m00912 expressed protein low similarity to SP|... 35 0.055
At3g28570.1 68416.m03567 AAA-type ATPase family protein contains... 35 0.073
At5g17750.1 68418.m02081 AAA-type ATPase family protein contains... 34 0.096
At3g28540.1 68416.m03564 AAA-type ATPase family protein contains... 34 0.096
At3g28520.1 68416.m03562 AAA-type ATPase family protein contains... 34 0.096
At4g05380.1 68417.m00820 AAA-type ATPase family protein contains... 34 0.13
At5g17730.1 68418.m02079 AAA-type ATPase family protein contains... 33 0.17
At3g28600.1 68416.m03570 AAA-type ATPase family protein contains... 33 0.22
At5g40010.1 68418.m04852 AAA-type ATPase family protein contains... 32 0.39
At1g79560.1 68414.m09275 FtsH protease, putative contains simila... 32 0.39
At5g57480.1 68418.m07183 AAA-type ATPase family protein contains... 32 0.51
At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1 nuc... 32 0.51
At4g25835.1 68417.m03716 AAA-type ATPase family protein contains... 31 0.68
At3g28610.1 68416.m03571 AAA-type ATPase family protein contains... 31 0.90
At3g28510.1 68416.m03561 AAA-type ATPase family protein contains... 31 1.2
At1g67120.1 68414.m07636 midasin-related similar to Midasin (MID... 31 1.2
At1g21690.1 68414.m02714 replication factor C 37 kDa, putative S... 30 1.6
At1g60700.1 68414.m06833 forkhead-associated domain-containing p... 30 2.1
At3g29185.2 68416.m03659 expressed protein 29 2.7
At3g29185.1 68416.m03658 expressed protein 29 2.7
At1g08270.1 68414.m00913 expressed protein low similarity to SP|... 29 3.6
At3g30842.1 68416.m03968 ABC transporter protein, putative simil... 29 4.8
At5g20520.1 68418.m02438 expressed protein 28 6.3
At5g13460.1 68418.m01549 calmodulin-binding family protein low s... 28 6.3
At3g48860.2 68416.m05337 expressed protein 28 6.3
At3g48860.1 68416.m05336 expressed protein 28 6.3
At2g46620.1 68415.m05815 AAA-type ATPase family protein contains... 28 6.3
>At5g20000.1 68418.m02380 26S proteasome AAA-ATPase subunit,
putative almost identical to 26S proteasome AAA-ATPase
subunit RPT6a GI:6652888 from [Arabidopsis thaliana];
almost identical to a member of conserved Sug1 CAD
family AtSUG1 GI:13537115 from [Arabidopsis thaliana]
Length = 419
Score = 137 bits (332), Expect = 7e-33
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
DSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPG K +LARAVA
Sbjct: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
HHT+CTFIRV + K Y+GE + VR
Sbjct: 217 HHTDCTFIRVSGSELVQK--YIGEGSRMVR 244
Score = 133 bits (322), Expect = 1e-31
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +2
Query: 254 VREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRN 433
+REELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VVD+DK++DI +T + RVALRN
Sbjct: 71 LREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRN 130
Query: 434 ESYTLHKILPNKVDPLVSLMMVEKV 508
+SY LH +LP+KVDPLV+LM VEKV
Sbjct: 131 DSYVLHLVLPSKVDPLVNLMKVEKV 155
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +3
Query: 126 KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM 254
+GEG YY+ ++ELQ + EKS NL RL+AQRNELN++VRM
Sbjct: 28 QGEGLNKYYLQHLDELQRLQREKSYNLNRLEAQRNELNSRVRM 70
>At5g19990.1 68418.m02379 26S proteasome AAA-ATPase subunit (RPT6a)
Length = 419
Score = 137 bits (332), Expect = 7e-33
Identities = 65/90 (72%), Positives = 76/90 (84%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
DSTY+M+GGLD+QIKEIKEVIELP+KHPELF++LGIAQPKGVLLYGPPG K +LARAVA
Sbjct: 157 DSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
HHT+CTFIRV + K Y+GE + VR
Sbjct: 217 HHTDCTFIRVSGSELVQK--YIGEGSRMVR 244
Score = 134 bits (324), Expect = 6e-32
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +2
Query: 254 VREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRN 433
+REELQLLQE GSYVGEVVK M K KVLVKVHPEGK+VVD+DK++DI +T + RVALRN
Sbjct: 71 LREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRN 130
Query: 434 ESYTLHKILPNKVDPLVSLMMVEKV 508
+SY LH +LP+KVDPLV+LM VEKV
Sbjct: 131 DSYVLHLVLPSKVDPLVNLMKVEKV 155
Score = 55.2 bits (127), Expect = 5e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +3
Query: 126 KGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRM 254
+GEG + YY+ I ELQ + +K+ NL RL+AQRNELN++VRM
Sbjct: 28 QGEGLKQYYLQHIHELQRQLRQKTNNLNRLEAQRNELNSRVRM 70
>At1g53750.1 68414.m06115 26S proteasome AAA-ATPase subunit (RPT1a)
similar to 26S proteasome ATPase subunit GI:1395190 from
[Spinacia oleracea]
Length = 426
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/93 (53%), Positives = 62/93 (66%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E D TY VGG +QI++++EV+ELP+ HPE F LGI PKGVL YGPPG K +LAR
Sbjct: 161 EKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLAR 220
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA+ T+ FIRV + K Y+GE A VR
Sbjct: 221 AVANRTDACFIRVIGSELVQK--YVGEGARMVR 251
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 EVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDP 478
+++ P + K ++ V KFVV L V D+ RV + Y + LP K+DP
Sbjct: 93 KIISPNTEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDP 152
Query: 479 LVSLMMVEK 505
V++M VE+
Sbjct: 153 SVTMMTVEE 161
>At1g53780.1 68414.m06120 26S proteasome AAA-ATPase subunit,
putative similar to 26S proteasome AAA-ATPase subunit
RPT1 SP:Q41365 from [Spinacia oleracea]
Length = 464
Score = 95.9 bits (228), Expect = 3e-20
Identities = 49/93 (52%), Positives = 62/93 (66%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E D+TY +GG +QI++I+EV+ELP+ HPE F LGI PKGVL YGPPG K ++AR
Sbjct: 198 EKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVAR 257
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA+ T FIRV + K Y+GE A VR
Sbjct: 258 AVANRTGACFIRVVGSELVQK--YIGEGARMVR 288
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 302 EVVKP-MDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVDP 478
+++ P + K +V + GK+VV L D+ A RV + + Y + LP K+DP
Sbjct: 130 QIISPNTEDAKYVVDIKKIGKYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDP 189
Query: 479 LVSLMMVEK 505
V++M VE+
Sbjct: 190 SVTMMTVEE 198
>At5g58290.1 68418.m07297 26S proteasome AAA-ATPase subunit (RPT3)
identical to 26S proteasome AAA-ATPase subunit RPT3
GI:6652882 from [Arabidopsis thaliana]
Length = 408
Score = 93.5 bits (222), Expect = 1e-19
Identities = 46/93 (49%), Positives = 62/93 (66%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E D +Y +GG D Q +EI+E +ELP+ H EL+ +GI P+GVLLYGPPG K +LA+
Sbjct: 148 EKPDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK 207
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
AVA+HT FIRV + + + + YLGE VR
Sbjct: 208 AVANHTTAAFIRV--VGSEFVQKYLGEGPRMVR 238
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/79 (21%), Positives = 38/79 (48%)
Frame = +2
Query: 257 REELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNE 436
+EE++ +Q +G+ ++ +D+ +V + V + ++ + + VAL
Sbjct: 66 QEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRH 125
Query: 437 SYTLHKILPNKVDPLVSLM 493
S L +LP + D +SL+
Sbjct: 126 SNALVDVLPPEADSSISLL 144
>At4g29040.1 68417.m04153 26S proteasome AAA-ATPase subunit (RPT2a)
almost identical to 26S proteasome AAA-ATPase subunit
RPT2a (GI:6652880) {Arabidopsis thaliana}; Drosophila
melanogaster 26S proteasome subunit 4 ATPase,
PID:g1066065
Length = 443
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PG K +LA+AVA+
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
T TF+RV + K YLG+ + VR
Sbjct: 246 TSATFLRVVGSELIQK--YLGDGPKLVR 271
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 296 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 475
VG + + +D+ +V ++ V + VD + + C + + N+ ++ IL ++VD
Sbjct: 112 VGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVD 171
Query: 476 PLVSLMMVEK 505
P+VS+M VEK
Sbjct: 172 PMVSVMKVEK 181
>At2g20140.1 68415.m02353 26S protease regulatory complex subunit 4,
putative similar to Swiss-Prot:P48601 26S protease
regulatory subunit 4 (P26S4) [Drosophila melanogaster]
Length = 443
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/88 (51%), Positives = 62/88 (70%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
+Y +GGL+ QI+EIKE +ELP+ HPEL++ +GI PKGV+LYG PG K +LA+AVA+
Sbjct: 186 SYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANS 245
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
T TF+RV + K YLG+ + VR
Sbjct: 246 TSATFLRVVGSELIQK--YLGDGPKLVR 271
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +2
Query: 296 VGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNESYTLHKILPNKVD 475
VG + + +D+ +V ++ V + VD + + C + + N+ ++ IL ++VD
Sbjct: 112 VGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVD 171
Query: 476 PLVSLMMVEK 505
P+VS+M VEK
Sbjct: 172 PMVSVMKVEK 181
>At5g43010.1 68418.m05245 26S proteasome AAA-ATPase subunit (RPT4a)
gb|AAF22524.1
Length = 399
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
+Y VGGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPG K +LARA+A +
Sbjct: 137 SYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
+ F++V + + Y+GE+A +R
Sbjct: 197 IDANFLKV--VSSAIIDKYIGESARLIR 222
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 260 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNES 439
++L+ LQ G +GEV++P+D ++++VK ++VV VD +T+ RV L +
Sbjct: 51 DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTT 110
Query: 440 YTLHKILPNKVDPLVSLMMVE 502
T+ + LP +VDP+V M+ E
Sbjct: 111 LTIMRALPREVDPVVYNMLHE 131
>At1g45000.1 68414.m05158 26S proteasome regulatory complex subunit
p42D, putative similar to 26S proteasome regulatory
complex subunit p42D [Drosophila melanogaster]
gi|6434958|gb|AAF08391
Length = 399
Score = 88.6 bits (210), Expect = 4e-18
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
+Y VGGL QI+E++E IELP+ +PELF +GI PKGVLLYGPPG K +LARA+A +
Sbjct: 137 SYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASN 196
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
+ F++V + + Y+GE+A +R
Sbjct: 197 IDANFLKV--VSSAIIDKYIGESARLIR 222
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/81 (34%), Positives = 49/81 (60%)
Frame = +2
Query: 260 EELQLLQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNVDINDVTANCRVALRNES 439
++L+ LQ G +GEV++P+D ++++VK ++VV VD +T+ RV L +
Sbjct: 51 DDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTT 110
Query: 440 YTLHKILPNKVDPLVSLMMVE 502
T+ + LP +VDP+V M+ E
Sbjct: 111 LTIMRALPREVDPVVYNMLHE 131
>At1g09100.1 68414.m01016 26S protease regulatory subunit 6A,
putative identical to SP:O04019 from [Arabidopsis
thaliana]
Length = 423
Score = 88.6 bits (210), Expect = 4e-18
Identities = 50/116 (43%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +1
Query: 442 YLTQNTTQQSRSSCV-AHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 618
YL +T S V A + E Y +GGL+KQI+E+ E I LP+ H E F+ LGI
Sbjct: 142 YLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGI 201
Query: 619 AQPKGVLLYGPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXA 786
PKGVLLYGPPG K ++ARA A T TF+++ Q + ++G+ A+ VR A
Sbjct: 202 RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ--LVQMFIGDGAKLVRDA 255
>At3g05530.1 68416.m00606 26S proteasome AAA-ATPase subunit (RPT5a)
identical to GB:AAF22525 GI:6652886 from [Arabidopsis
thaliana]
Length = 424
Score = 88.2 bits (209), Expect = 6e-18
Identities = 49/116 (42%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Frame = +1
Query: 442 YLTQNTTQQSRSSCV-AHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 618
YL +T S V A + E Y +GGL+KQI+E+ E I LP+ H E F+ LG+
Sbjct: 143 YLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGV 202
Query: 619 AQPKGVLLYGPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXA 786
PKGVLLYGPPG K ++ARA A T TF+++ Q + ++G+ A+ VR A
Sbjct: 203 RPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQ--LVQMFIGDGAKLVRDA 256
>At5g03340.1 68418.m00286 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain; supporting cDNA
gi|26449351|dbj|AK117125.1|
Length = 810
Score = 85.0 bits (201), Expect = 5e-17
Identities = 37/77 (48%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +1
Query: 484 VAHDGRESADST-YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGH 660
V + E D Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG
Sbjct: 193 VKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 252
Query: 661 WKDILARAVAHHTECTF 711
K ++ARAVA+ T F
Sbjct: 253 GKTLIARAVANETGAFF 269
Score = 73.7 bits (173), Expect = 1e-13
Identities = 31/73 (42%), Positives = 50/73 (68%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E + ++E +GGL+ +E++E ++ PV+HPE F+ G++ KGVL YGPPG K +LA+
Sbjct: 473 EVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 682 AVAHHTECTFIRV 720
A+A+ + FI V
Sbjct: 533 AIANECQANFISV 545
>At3g09840.1 68416.m01174 cell division cycle protein 48 (CDC48A)
(CDC48) identical to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}
Length = 809
Score = 85.0 bits (201), Expect = 5e-17
Identities = 35/67 (52%), Positives = 52/67 (77%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
D Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG K ++ARAVA
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 691 HHTECTF 711
+ T F
Sbjct: 263 NETGAFF 269
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/73 (41%), Positives = 49/73 (67%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E + ++ +GGL+ +E++E ++ PV+HPE F+ G++ KGVL YGPPG K +LA+
Sbjct: 473 EVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAK 532
Query: 682 AVAHHTECTFIRV 720
A+A+ + FI V
Sbjct: 533 AIANECQANFISV 545
>At3g53230.1 68416.m05865 cell division cycle protein 48, putative /
CDC48, putative very strong similarity to SP|P54609 Cell
division cycle protein 48 homolog {Arabidopsis
thaliana}; contains Pfam profiles PF00004: ATPase AAA
family, PF02359: Cell division protein 48 (CDC48)
N-terminal domain
Length = 815
Score = 84.6 bits (200), Expect = 7e-17
Identities = 36/77 (46%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
Frame = +1
Query: 484 VAHDGRESADST-YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGH 660
+ + E D Y+ VGG+ KQ+ +I+E++ELP++HP+LF ++G+ PKG+LLYGPPG
Sbjct: 194 IKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGS 253
Query: 661 WKDILARAVAHHTECTF 711
K ++ARAVA+ T F
Sbjct: 254 GKTLIARAVANETGAFF 270
Score = 74.1 bits (174), Expect = 1e-13
Identities = 33/90 (36%), Positives = 54/90 (60%)
Frame = +1
Query: 451 QNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 630
Q S S + E + ++E +GGL+ +E++E ++ PV+HPE F+ G++ K
Sbjct: 457 QTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSK 516
Query: 631 GVLLYGPPGHWKDILARAVAHHTECTFIRV 720
GVL YGPPG K +LA+A+A+ + FI +
Sbjct: 517 GVLFYGPPGCGKTLLAKAIANECQANFISI 546
>At4g24860.1 68417.m03559 AAA-type ATPase family protein contains Pfam
profile PF00004: ATPase, AAA family
Length = 1122
Score = 65.7 bits (153), Expect = 3e-11
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAV 687
D T++ +G L+K +KE++ LP++ PELF + +P KG+LL+GPPG K +LA+AV
Sbjct: 816 DVTFDDIGALEKVKDILKELVMLPLQRPELFCKGELTKPCKGILLFGPPGTGKTMLAKAV 875
Query: 688 AHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
A + FI + K F GE ++V+ S
Sbjct: 876 AKEADANFINISMSSITSKWF--GEGEKYVKAVFS 908
>At5g53540.1 68418.m06653 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 403
Score = 65.3 bits (152), Expect = 4e-11
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAV 687
D + +GGL+ + + E++ LP+K PELF + P KGVLLYGPPG K +LA+A+
Sbjct: 83 DVEFGSIGGLESIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAI 142
Query: 688 AHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
A +E FI V + N K++ G+A + V S
Sbjct: 143 ARESEAVFINV-KVSNLMSKWF-GDAQKLVSAVFS 175
>At4g02480.1 68417.m00335 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to Spastin
(Swiss-Prot:Q9UBP0) [Homo sapiens] and Spastin (Fragment)
(Swiss-Prot:Q9QYY8) [Mus musculus]; similar to
mitochondrial sorting protein 1 (MSP1) protein
(TAT-binding homolog 4) (Swiss-Prot:P28737)
[Saccharomyces cerevisiae]
Length = 1265
Score = 63.7 bits (148), Expect = 1e-10
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAH 693
+++ +G L+ + +KE++ LP++ PELFD + +P KG+LL+GPPG K +LA+AVA
Sbjct: 961 SFDDIGALENVKETLKELVMLPLQRPELFDKGQLTKPTKGILLFGPPGTGKTMLAKAVAT 1020
Query: 694 HTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
FI + K F GE ++V+ S
Sbjct: 1021 EAGANFINISMSSITSKWF--GEGEKYVKAVFS 1051
>At3g56690.1 68416.m06306 calmodulin-binding protein identical to
calmodulin-binding protein GI:6760428 from [Arabidopsis
thaliana]
Length = 1022
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/110 (31%), Positives = 59/110 (53%)
Frame = +1
Query: 451 QNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPK 630
+N + R S + E +E VGG ++ ++ E +E P KH + F +G P
Sbjct: 700 ENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPS 759
Query: 631 GVLLYGPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
G+L++GPPG K ++ARAVA + F+ V + + K ++GE+ + VR
Sbjct: 760 GILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSK--WVGESEKAVR 807
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +1
Query: 493 DGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDI 672
D E+ +GGL K+ ++++I+ L +LG+ KGVL++GPPG K
Sbjct: 375 DEGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSL-SSLGLRPTKGVLIHGPPGTGKTS 433
Query: 673 LARAVAHHTECTFIRV 720
LAR A H+ F V
Sbjct: 434 LARTFARHSGVNFFSV 449
>At1g05910.1 68414.m00620 cell division cycle protein 48-related /
CDC48-related similar to SP|P54609 Cell division cycle
protein 48 homolog {Arabidopsis thaliana}; contains Pfam
profiles PF00004: ATPase AAA family, PF00439:
Bromodomain
Length = 1210
Score = 62.1 bits (144), Expect = 4e-10
Identities = 26/60 (43%), Positives = 41/60 (68%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
D ++ +GGL + I ++KE++ P+ +PE F + I P+GVLL GPPG K ++ARA+A
Sbjct: 377 DINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALA 436
>At4g27680.1 68417.m03980 MSP1 protein, putative /
intramitochondrial sorting protein, putative similar to
Swiss-Prot:P28737 MSP1 protein (TAT-binding homolog 4)
[Saccharomyces cerevisiae]; contains Pfam domain,
PF00004: ATPase, AAA family
Length = 398
Score = 61.7 bits (143), Expect = 6e-10
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAV 687
D + +GGL+ + + E++ LP+K PELF + P KGVLLYGPPG K +LA+A+
Sbjct: 80 DVEFGSIGGLETIKQALYELVILPLKRPELFAYGKLLGPQKGVLLYGPPGTGKTMLAKAI 139
Query: 688 AHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
A + FI V + N K++ G+A + V S
Sbjct: 140 AKESGAVFINV-RVSNLMSKWF-GDAQKLVSAVFS 172
>At2g03670.1 68415.m00326 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 603
Score = 60.9 bits (141), Expect = 1e-09
Identities = 30/88 (34%), Positives = 52/88 (59%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T++ VGGL K++++ +E P+KH F +GI+ +G+LL+GPPG K LA+A A+
Sbjct: 284 TWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANA 343
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
+ +F + + + Y+GE +R
Sbjct: 344 AQASFFSLSCAELF--SMYVGEGEALLR 369
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/88 (31%), Positives = 49/88 (55%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
+GG ++ ++ ++E+I P ++P LG+ P+G+LLYGPPG K L RAV EC
Sbjct: 24 IGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQ--ECD 81
Query: 709 FIRVFWIQNWYKKFYLGEAAEWVRXALS 792
+ + + + GE+ + +R A +
Sbjct: 82 AHLIVLSPHSVHRAHAGESEKVLREAFA 109
>At1g64110.2 68414.m07264 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 829
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILA 678
E + T++ +G LD+ + ++E++ LP++ P+LF G+ +P +G+LL+GPPG K +LA
Sbjct: 514 EEINVTFKDIGALDEIKESLQELVMLPLRRPDLFTG-GLLKPCRGILLFGPPGTGKTMLA 572
Query: 679 RAVAHHTECTFIRV 720
+A+A +FI V
Sbjct: 573 KAIAKEAGASFINV 586
>At1g64110.1 68414.m07263 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 824
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/74 (37%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILA 678
E + T++ +G LD+ + ++E++ LP++ P+LF G+ +P +G+LL+GPPG K +LA
Sbjct: 509 EEINVTFKDIGALDEIKESLQELVMLPLRRPDLFTG-GLLKPCRGILLFGPPGTGKTMLA 567
Query: 679 RAVAHHTECTFIRV 720
+A+A +FI V
Sbjct: 568 KAIAKEAGASFINV 581
>At5g58870.1 68418.m07376 FtsH protease, putative contains
similarity to cell division protein FtsH homolog 3
SP:P73437 (EC 3.4.24.-) [strain PCC6803] {Synechocystis
sp.}
Length = 806
Score = 60.1 bits (139), Expect = 2e-09
Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Frame = +1
Query: 448 TQNTTQQ--SRSSCVAHDGRESADS---TYEMVGGLDKQIKEIKEVIELPVKHPELFDAL 612
+Q+TT Q +R S G+ S D T+ V G+D+ +E++E++E +K+P+ + L
Sbjct: 299 SQSTTGQLRTRKSGGPGGGKVSGDGETITFADVAGVDEAKEELEEIVEF-LKNPDRYVRL 357
Query: 613 GIAQPKGVLLYGPPGHWKDILARAVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
G P+GVLL G PG K +LA+AVA ++ FI + + + Y+G A VR
Sbjct: 358 GARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISC--SASEFVELYVGMGASRVR 411
>At5g15250.1 68418.m01786 FtsH protease, putative similar to
FtsH-like protein Pftf precursor GI:4325041 from
[Nicotiana tabacum]
Length = 687
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
T+E V G+D+ ++ +E++E +K PE F ALG PKGVLL GPPG K +LA+A+A
Sbjct: 221 TFEDVAGVDEAKQDFEEIVEF-LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIA 277
>At4g28000.1 68417.m04016 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 726
Score = 59.7 bits (138), Expect = 2e-09
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAH 693
T+ +G LD+ + ++E++ LP++ P+LF G+ +P +G+LL+GPPG K ++A+A+A+
Sbjct: 412 TFADIGSLDETKESLQELVMLPLRRPDLFKG-GLLKPCRGILLFGPPGTGKTMMAKAIAN 470
Query: 694 HTECTFIRV 720
+FI V
Sbjct: 471 EAGASFINV 479
>At2g30950.1 68415.m03775 FtsH protease (VAR2) identical to zinc
dependent protease VAR2 GI:7650138 from [Arabidopsis
thaliana]
Length = 695
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPG K +LA+A+A
Sbjct: 225 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F + + + + ++G A VR
Sbjct: 284 AGVPFFSISGSE--FVEMFVGVGASRVR 309
>At1g06430.1 68414.m00680 FtsH protease, putative similar to zinc
dependent protease GI:7650138 from [Arabidopsis
thaliana]
Length = 685
Score = 59.7 bits (138), Expect = 2e-09
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T++ V G+D+ ++ EV+E +K PE F A+G PKGVLL GPPG K +LA+A+A
Sbjct: 218 TFDDVAGVDEAKQDFMEVVEF-LKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F + + + + ++G A VR
Sbjct: 277 AGVPFFSISGSE--FVEMFVGVGASRVR 302
>At1g02890.1 68414.m00256 AAA-type ATPase family protein contains Pfam
domain, PF00004: ATPase, AAA family; similar to
mitochondrial sorting protein 1 (MSP1) (TAT-binding
homolog 4) (Swiss-Prot:P28737) [Saccharomyces cerevisiae]
Length = 1252
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAH 693
++ +G L+ +KE++ LP++ PELF + +P KG+LL+GPPG K +LA+AVA
Sbjct: 948 SFSDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPTKGILLFGPPGTGKTMLAKAVAT 1007
Query: 694 HTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
FI + K F GE ++V+ S
Sbjct: 1008 EAGANFINISMSSITSKWF--GEGEKYVKAVFS 1038
>At2g34560.2 68415.m04246 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 393
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 499 RESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILA 678
R + + +E + GL+ K +KE + +P+K+P F+ L + KG+LL+GPPG K +LA
Sbjct: 104 RGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLA 162
Query: 679 RAVAHHTECTFIRV 720
+AVA TF +
Sbjct: 163 KAVATECNTTFFNI 176
>At2g34560.1 68415.m04245 katanin, putative similar to katanin p60
subunit [Strongylocentrotus purpuratus] GI:3098603;
contains Pfam profile PF00004: ATPase AAA family
Length = 384
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +1
Query: 499 RESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILA 678
R + + +E + GL+ K +KE + +P+K+P F+ L + KG+LL+GPPG K +LA
Sbjct: 95 RGNPNIKWESIKGLENAKKLLKEAVVMPIKYPTYFNGL-LTPWKGILLFGPPGTGKTMLA 153
Query: 679 RAVAHHTECTFIRV 720
+AVA TF +
Sbjct: 154 KAVATECNTTFFNI 167
>At4g23940.1 68417.m03443 FtsH protease, putative contains
similarity to zinc dependent protease GI:7650138 from
[Arabidopsis thaliana]
Length = 946
Score = 58.4 bits (135), Expect = 5e-09
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
V G+D+ + E++E+++ +K+P+LFD +GI P GVLL GPPG K ++A+A+A
Sbjct: 432 VAGIDEAVDELQELVKY-LKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAGVP 490
Query: 709 FIRV 720
F ++
Sbjct: 491 FYQM 494
>At1g03000.1 68414.m00271 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 941
Score = 58.4 bits (135), Expect = 5e-09
Identities = 33/87 (37%), Positives = 51/87 (58%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ VGGL+ I + ++LP+ H +LF + G+ + GVLLYGPPG K +LA+AVA
Sbjct: 657 WDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATEC 715
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F+ V + Y+GE+ + VR
Sbjct: 716 SLNFLSVKGPE--LINMYIGESEKNVR 740
>At1g50140.1 68414.m05623 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 640
Score = 58.0 bits (134), Expect = 7e-09
Identities = 33/103 (32%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +1
Query: 415 SCRSSQRKLYLTQNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHP 594
S + SQ + ++ +++ S V G +E +G L+ K + E++ LP++ P
Sbjct: 317 SLKPSQNLKNIAKDEYERNFVSAVVAPGEIGVK--FEDIGALEDVKKALNELVILPMRRP 374
Query: 595 ELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHHTECTFIRV 720
ELF + +P KG+LL+GPPG K +LA+A+A FI +
Sbjct: 375 ELFARGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISI 417
>At3g47060.1 68416.m05110 FtsH protease, putative contains
similarity to FtsH protease GI:13183728 from [Medicago
sativa]
Length = 802
Score = 57.6 bits (133), Expect = 9e-09
Identities = 33/88 (37%), Positives = 52/88 (59%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T+ V G+D+ +E++E++E +++PE + LG P+GVLL G PG K +LA+AVA
Sbjct: 323 TFADVAGVDEAKEELEEIVEF-LRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
E FI + + + Y+G A VR
Sbjct: 382 AEVPFISC--SASEFVELYVGMGASRVR 407
>At3g19740.1 68416.m02499 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 439
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHH 696
++ +G L+ K + E++ LP++ PELF + +P KG+LL+GPPG K +LA+A+A
Sbjct: 149 FDDIGALEHVKKTLNELVILPMRRPELFTRGNLLRPCKGILLFGPPGTGKTLLAKALATE 208
Query: 697 TECTFIRV 720
FI +
Sbjct: 209 AGANFISI 216
>At3g01610.1 68416.m00092 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family ('A'TPases
'A'ssociated with diverse cellular 'A'ctivities)
Length = 820
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/90 (33%), Positives = 48/90 (53%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
D ++ VGGLD + I P+K P+++ A G+ G LLYGPPG K ++A+A A
Sbjct: 524 DVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAA 583
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
+ F+ + + K Y+GE+ +R
Sbjct: 584 NEAGANFMHIKGAELLNK--YVGESELAIR 611
Score = 54.4 bits (125), Expect = 8e-08
Identities = 23/68 (33%), Positives = 40/68 (58%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T++ GG+ K + E++ + P+ +PE F +G+ P G+L +GPPG K LA A+A+
Sbjct: 231 TFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANE 290
Query: 697 TECTFIRV 720
F ++
Sbjct: 291 AGVPFYKI 298
>At5g42270.1 68418.m05145 FtsH protease, putative similar to FtsH
protease GI:13183728 from [Medicago sativa]
Length = 704
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/88 (37%), Positives = 49/88 (55%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T+ V G D+ E++EV++ +K+P+ + ALG PKG LL GPPG K +LARAVA
Sbjct: 248 TFGDVAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F + + + ++G A VR
Sbjct: 307 AGVPFFSC--AASEFVELFVGVGASRVR 332
>At3g15120.1 68416.m01913 AAA-type ATPase family protein contains
PROSITE domains, PS00674: AAA-protein family signature
and PS00017: ATP/GTP-binding site motif A (P-loop)
Length = 1954
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAV 687
++ V GL+ + +KEV+ +P+ +PE FD LG+ P+G+LL+G PG K ++ RA+
Sbjct: 718 WDSVAGLEGVTQCMKEVVLIPLLYPEFFDNLGLTPPRGILLHGHPGTGKTLVVRAL 773
>At1g50250.1 68414.m05634 cell division protein ftsH homolog 1,
chloroplast (FTSH1) (FTSH) identical to SP:Q39102 Cell
division protein ftsH homolog 1, chloroplast
precursor (EC 3.4.24.-) [Arabidopsis thaliana]
Length = 716
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/84 (38%), Positives = 47/84 (55%)
Frame = +1
Query: 529 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTECT 708
V G D+ E++EV++ +K+P+ + ALG PKG LL GPPG K +LARAVA
Sbjct: 264 VAGADQAKLELQEVVDF-LKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVP 322
Query: 709 FIRVFWIQNWYKKFYLGEAAEWVR 780
F + + + ++G A VR
Sbjct: 323 FFSC--AASEFVELFVGVGASRVR 344
>At2g27600.1 68415.m03346 AAA-type ATPase family protein / vacuolar
sorting protein-related similar to SP|P46467 SKD1
protein (Vacuolar sorting protein 4b) {Mus musculus};
contains Pfam profiles PF00004: ATPase AAA family,
PF04212: MIT domain
Length = 435
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 499 RESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDIL 675
RE + + V GL+ + ++E + LPVK P+ F G +P + LLYGPPG K L
Sbjct: 124 REKPNIKWSDVAGLESAKQALQEAVILPVKFPQFFT--GKRRPWRAFLLYGPPGTGKSYL 181
Query: 676 ARAVAHHTECTFIRV 720
A+AVA + TF V
Sbjct: 182 AKAVATEADSTFFSV 196
>At1g80350.1 68414.m09406 katanin 1 (KTN1) identical to katanin 1
(KTN1) [Arabidopsis thaliana] GI:14133602
Length = 523
Score = 53.2 bits (122), Expect = 2e-07
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = +1
Query: 499 RESADST----YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHW 663
R+ DST ++ V GL + + ++E + LP+ PE F GI +P KGVL++GPPG
Sbjct: 227 RDVLDSTPGVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQ--GIRRPWKGVLMFGPPGTG 284
Query: 664 KDILARAVAHHTECTFIRV 720
K +LA+AVA TF V
Sbjct: 285 KTLLAKAVATECGTTFFNV 303
>At2g45500.1 68415.m05659 AAA-type ATPase family protein similar to
SP|Q9QYY8 Spastin (Fragment) {Mus musculus}; contains
Pfam profiles PF00004: ATPase AAA family, PF04212: MIT
domain
Length = 487
Score = 52.8 bits (121), Expect = 3e-07
Identities = 27/68 (39%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHH 696
++ V GL+ + + E++ LP K +LF G+ +P +G+LL+GPPG+ K +LA+AVA
Sbjct: 215 WDDVAGLNGAKQALLEMVILPAKRRDLFT--GLRRPARGLLLFGPPGNGKTMLAKAVASE 272
Query: 697 TECTFIRV 720
++ TF V
Sbjct: 273 SQATFFNV 280
>At5g53170.1 68418.m06610 FtsH protease, putative similar to
ATP-dependent metalloprotease FtsH1 GI:3600100 from [Mus
musculus]
Length = 806
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/88 (35%), Positives = 50/88 (56%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
T++ V G D +E++EV+E +K+P F LG PKG+LL G PG K +LA+A+A
Sbjct: 360 TFKDVKGCDDAKQELEEVVEY-LKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGE 418
Query: 697 TECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F + + +++ ++G A VR
Sbjct: 419 AGVPFF--YRAGSEFEEMFVGVGARRVR 444
>At2g26140.1 68415.m03137 FtsH protease, putative contains
similarity to YME1 GI:295582, a member of the
ftsH-SEC18-PAS1-CDC48 family of putative ATPase-encoding
genes from [Saccharomyces cerevisiae]
Length = 717
Score = 52.4 bits (120), Expect = 3e-07
Identities = 31/95 (32%), Positives = 51/95 (53%)
Frame = +1
Query: 508 ADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAV 687
+ + + V G+D+ E++E++ ++ P+ F LG PKGVLL GPPG K +LARA+
Sbjct: 222 SSTKFSDVKGVDEAKAELEEIVHY-LRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAI 280
Query: 688 AHHTECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
A F + +++ ++G A VR S
Sbjct: 281 AGEAGVPFFSCSGSE--FEEMFVGVGARRVRDLFS 313
>At3g16290.1 68416.m02056 FtsH protease, putative contains
similarity to cell division protein FtsH GI:1652085 from
[Synechocystis sp. PCC 6803]
Length = 876
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/90 (34%), Positives = 47/90 (52%)
Frame = +1
Query: 511 DSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
D + V GL K E++E+++ H E++ G+ P G+LL GPPG K +LA+AVA
Sbjct: 406 DVKFTDVAGLGKIRLELEEIVKF-FTHGEMYRRRGVKIPGGILLCGPPGVGKTLLAKAVA 464
Query: 691 HHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F + Q + + Y+G A VR
Sbjct: 465 GEAGVNFFSISASQ--FVEIYVGVGASRVR 492
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/93 (32%), Positives = 50/93 (53%)
Frame = +1
Query: 502 ESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILAR 681
E T++ G + +E++E++ + +K+ E F GI PKGVLL+GPPG K +LA+
Sbjct: 309 EKTGVTFDDFAGQEYIKRELQEIVRI-LKNDEEFQNKGIYCPKGVLLHGPPGTGKTLLAK 367
Query: 682 AVAHHTECTFIRVFWIQNWYKKFYLGEAAEWVR 780
A+A F + + ++G AA V+
Sbjct: 368 AIAGEAGLPFFAANGTD--FVEMFVGVAASRVK 398
>At2g29080.1 68415.m03535 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 809
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/67 (37%), Positives = 40/67 (59%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ V G D+ +EI E + +K+P+ ++ LG PKG LL GPPG K +LA+A A +
Sbjct: 321 FKDVAGCDEAKQEIMEFVHF-LKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 379
Query: 700 ECTFIRV 720
F+ +
Sbjct: 380 GVPFLSI 386
>At1g62130.1 68414.m07010 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 1025
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 517 TYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAH 693
T++ +G L+ +KE++ LP + PELF + +P G+LL+GP G K +LA+AVA
Sbjct: 733 TFDDIGALENVKDTLKELVMLPFQWPELFCKGQLTKPCNGILLFGPSGTGKTMLAKAVAT 792
Query: 694 HTECTFIRVFWIQNWYKK 747
I + + W+ +
Sbjct: 793 EAGANLINMS-MSRWFSE 809
>At5g08470.1 68418.m00999 peroxisome biogenesis protein (PEX1)
identical to peroxisome biogenesis protein PEX1
[Arabidopsis thaliana] gi|12006272|gb|AAG44817; contains
Pfam profile PF00004: ATPase, AAA family; identical to
cDNA peroxisome biogenesis protein PEX1 (PEX1) mRNA,
partial cds GI:12006271
Length = 1130
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/91 (37%), Positives = 45/91 (49%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
+E VGG+ IKE+IELP K P++F + VLLYGPPG K + A A
Sbjct: 843 WEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAAC 902
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVRXALS 792
FI V + K Y+G + + VR S
Sbjct: 903 SLRFISVKGPELLNK--YIGASEQAVRDIFS 931
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +1
Query: 601 FDALGIAQPKGVLLYGPPGHWKDILARAVAHHTE 702
F I P +L+YGPPG K ILARA A + E
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKYFE 618
>At1g07510.1 68414.m00804 FtsH protease, putative similar to
AAA-metalloprotease FtsH [Pisum sativum] GI:15021761;
contains Pfam profiles PF01434: Peptidase family M41,
PF00004: ATPase AAA family
Length = 813
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/67 (34%), Positives = 40/67 (59%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ V G ++ +EI E + +++P+ ++ LG PKG LL GPPG K +LA+A A +
Sbjct: 326 FKDVAGCEEAKQEIMEFVHF-LQNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKATAGES 384
Query: 700 ECTFIRV 720
F+ +
Sbjct: 385 AVPFLSI 391
>At3g27120.1 68416.m03393 spastin ATPase, putative similar to
SWISS-PROT:Q9QYY8 spastin (Fragment) [Mus musculus];
contains Pfam domain, PF00004: ATPase, AAA family
Length = 287
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGHWKDILARAVAHH 696
++ + GL+ K + E++ P+ P++F G P KG+LL+GPPG K ++ +A+A
Sbjct: 9 WDDIAGLEHAKKCVTEMVIWPLLRPDIFK--GCRSPGKGLLLFGPPGTGKTMIGKAIAGE 66
Query: 697 TECTFIRV 720
+ TF +
Sbjct: 67 AKATFFYI 74
>At3g02450.1 68416.m00232 cell division protein ftsH, putative
similar to SWISS-PROT:P46469 cell division protein ftsH
homolog [Lactococcus lactis]; contains Pfam domain,
PF00004: ATPase, AAA family ('A'TPases 'A'ssociated with
diverse cellular 'A'ctivities)
Length = 622
Score = 44.4 bits (100), Expect = 9e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Frame = +1
Query: 520 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHT 699
++ V G+D E+ E++ ++ + LG P+GVLL GPPG K +LARAVA
Sbjct: 333 FDDVEGVDSAKDELVEIVSC-LQGSINYKKLGARLPRGVLLVGPPGTGKTLLARAVAGEA 391
Query: 700 ECTFIRVFWIQNWYKKFYLGEAAEWVR 780
F V + + + ++G A +R
Sbjct: 392 GVPFFSV--SASEFVELFVGRGAARIR 416
>At5g17760.2 68418.m02083 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 341
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST+E + D +++ E ++ ++ E + +G A +G LLYGPPG K L A+A+
Sbjct: 216 STFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 275
Query: 694 H 696
+
Sbjct: 276 Y 276
>At5g17760.1 68418.m02082 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 505
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST+E + D +++ E ++ ++ E + +G A +G LLYGPPG K L A+A+
Sbjct: 216 STFETMAMEDDLKRDVIEDLDRFIRRKEFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 275
Query: 694 H 696
+
Sbjct: 276 Y 276
>At3g50930.1 68416.m05576 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 576
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 514 STYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
ST++ + +D +K + E ++ VK + + +G A +G LLYGPPG K L A+A
Sbjct: 262 STFKTLA-MDSDVKTSVMEDLDKFVKRRDFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMA 320
Query: 691 HH 696
+H
Sbjct: 321 NH 322
>At4g04910.1 68417.m00714 AAA-type ATPase family protein similar to
SP|P18708 Vesicular-fusion protein NSF
(N-ethylmaleimide-sensitive fusion protein)
(NEM-sensitive fusion protein) {Cricetulus griseus};
contains Pfam profiles PF00004: ATPase AAA family,
PF02359: Cell division protein 48 (CDC48) N-terminal
domain; contains non-consensus AT-AC splice sites at
intron 2
Length = 742
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 529 VGGLDKQIKEI-KEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAV 687
+GGL + +I + V P + LGI KG+LL+GPPG K ++AR +
Sbjct: 217 IGGLGAEFADIFRRAFASRVFPPHVTSRLGIKHVKGMLLFGPPGTGKTLMARQI 270
>At4g04180.1 68417.m00593 AAA-type ATPase family protein contains
Pfam domain, PF00004: ATPase, AAA family
Length = 609
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Frame = +1
Query: 496 GRESADS-TYEMVGGLDKQIKEIKEVIELPVKHPELFDAL--GIA------QPKGVLLYG 648
G +S D +++ + G D+Q +EI++ I + + PE++D + G +P+ VL G
Sbjct: 309 GDDSMDEISWDNIAGYDQQKREIEDTILMALHSPEVYDDIVRGTRSKFESNRPRAVLFEG 368
Query: 649 PPGHWKDILARAVAH 693
PPG K AR +A+
Sbjct: 369 PPGTGKTSCARVIAN 383
>At3g50940.1 68416.m05577 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +1
Query: 514 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
ST+ + LD ++K+ + E ++ V+ + +G A +G LLYGPPG K L A+A
Sbjct: 210 STFRTLA-LDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRGYLLYGPPGTGKSSLIAAIA 268
Query: 691 HH 696
+H
Sbjct: 269 NH 270
>At2g18193.1 68415.m02117 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 495
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/61 (34%), Positives = 34/61 (55%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST++ + K+I + +E +K E + +G A +G LLYGPPG K L A+A+
Sbjct: 206 STFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 265
Query: 694 H 696
+
Sbjct: 266 Y 266
>At3g28580.1 68416.m03568 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 500
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/94 (26%), Positives = 46/94 (48%)
Frame = +1
Query: 421 RSSQRKLYLTQNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPEL 600
++ +RKLY +S +H E +T++ + + + +EIK + K +
Sbjct: 173 KNRERKLYSNTPGQSHGNNSKWSHVTFEHP-ATFDTLAMEENKKEEIKSDLIKFSKSKDY 231
Query: 601 FDALGIAQPKGVLLYGPPGHWKDILARAVAHHTE 702
+ +G A +G LL+GPPG K + A+A+ E
Sbjct: 232 YKKIGKAWKRGYLLFGPPGTGKSTMIAAMANFLE 265
>At2g18190.1 68415.m02116 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 494
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST+E + K+I + +E +K E + +G A +G LLYGPPG K L A+A+
Sbjct: 207 STFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYLLYGPPGTGKSSLIAAMAN 266
Query: 694 H 696
+
Sbjct: 267 Y 267
>At1g43910.1 68414.m05066 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 586 KHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
K + F ++G A +G LLYGPPG K + A+A+H
Sbjct: 226 KGKDFFKSVGRAWKRGYLLYGPPGTGKSSMVAAIANH 262
>At5g17740.1 68418.m02080 AAA-type ATPase family protein h-bcs1,
Homo sapiens, EMBL:AF026849 h-bcs1, Homo sapiens,
EMBL:AF026849 h-bcs1, Homo sapiens, EMBL:AF026849
contains Pfam profile: ATPase family PF00004
gene_id:K17E7.100 contains Pfam profile: ATPase family
PF00004
Length = 533
Score = 35.9 bits (79), Expect = 0.031
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST++ + D + + E ++ V + + +G A +G LLYGPPG K L A+A+
Sbjct: 208 STFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAWKRGYLLYGPPGTGKSSLVAAMAN 267
Query: 694 H 696
+
Sbjct: 268 Y 268
>At4g30250.1 68417.m04301 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 512
Score = 35.1 bits (77), Expect = 0.055
Identities = 25/92 (27%), Positives = 38/92 (41%)
Frame = +1
Query: 421 RSSQRKLYLTQNTTQQSRSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPEL 600
R+ +R LY S R ST++ + ++ K I E +
Sbjct: 170 RNEERLLYTNSRGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGF 229
Query: 601 FDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
+ G A +G LLYGPPG K L A+A++
Sbjct: 230 YQKTGRAWKRGYLLYGPPGTGKSSLIAAMANY 261
>At1g08270.2 68414.m00912 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 132
Score = 35.1 bits (77), Expect = 0.055
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +1
Query: 499 RESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGV 636
RE + + +V GL+ + +KE + LPV P+ F A I P+ V
Sbjct: 85 REKPNVKWTVVAGLESAKQALKEAVILPVNFPQFFTARAIYDPRDV 130
>At3g28570.1 68416.m03567 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 451
Score = 34.7 bits (76), Expect = 0.073
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 595 ELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
E +D +G A +G LLYGPPG K + A+A+
Sbjct: 226 EYYDRIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
>At5g17750.1 68418.m02081 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 392
Score = 34.3 bits (75), Expect = 0.096
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST+ + K + E ++ +K + + +G A + LYGPPG K L A+A+
Sbjct: 183 STFHTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMAN 242
Query: 694 H 696
+
Sbjct: 243 Y 243
>At3g28540.1 68416.m03564 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 510
Score = 34.3 bits (75), Expect = 0.096
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +1
Query: 409 QLSCRSSQRKLYLTQNTTQQSRSSCVAHDGRESAD--STYEMVG-GLDKQIKEIKEVIEL 579
++ ++ +RKLY T N++Q + D +T+E + L+K+ K++I+
Sbjct: 166 EIGLKNRERKLY-TNNSSQDYSAWREGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKF 224
Query: 580 PVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTE 702
K + + +G +G LL+GPPG K + A+A+ E
Sbjct: 225 -TKGKDYYRKVGKPWKRGYLLFGPPGTGKSTMISAMANFLE 264
>At3g28520.1 68416.m03562 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 478
Score = 34.3 bits (75), Expect = 0.096
Identities = 25/100 (25%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Frame = +1
Query: 409 QLSCRSSQRKLYLTQNTTQQSRS-SCVAHDGRESADSTYEMVG-GLDKQIKEIKEVIELP 582
+++ ++ +RKLY +++ S + + + +++E +G LDK+ +EIK+ +
Sbjct: 155 EIALKNRERKLYTNNDSSSYSSWWEGLWSNVPFNHHASFETLGMDLDKK-EEIKKDLIKF 213
Query: 583 VKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTE 702
K + + + +G LL+GPPG K + A+A+ E
Sbjct: 214 TKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIANFLE 253
>At4g05380.1 68417.m00820 AAA-type ATPase family protein contains
similarity to mitochondrial ATPase (AAA family) Bcs1p,
Saccharomyces cerevisiae, Swiss Prot:P32839
Length = 248
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 595 ELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
+ F +G A +G LLYGPPG K L A+A+
Sbjct: 21 DFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIAN 53
>At5g17730.1 68418.m02079 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 470
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/61 (24%), Positives = 33/61 (54%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST++ + ++ + + ++ ++ + + +G +G LLYGPPG K L A+A+
Sbjct: 208 STFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIAN 267
Query: 694 H 696
+
Sbjct: 268 Y 268
>At3g28600.1 68416.m03570 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 475
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 595 ELFDALGIAQPKGVLLYGPPGHWKDILARAVAHH 696
E + +G A +G LL+GPPG K + A+A+H
Sbjct: 226 EYYKKIGKAWKRGYLLHGPPGTGKSTMIAAMANH 259
>At5g40010.1 68418.m04852 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 514
Score = 32.3 bits (70), Expect = 0.39
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +1
Query: 412 LSCRSSQRKLYLTQNTTQQS--RSSCVAHDGRESADSTYEMVGGLDKQIKEIKEVIELPV 585
+ ++ +RKLY + S + + +H E +T++ + K+ +EIK +
Sbjct: 171 IEVKNRERKLYSNNPSQNWSGYKQTKWSHVTFEHP-ATFDTLAMEYKKKEEIKNDLIKFS 229
Query: 586 KHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAHHTE 702
+ + +G A +G LL+GPPG K + A+A+ E
Sbjct: 230 NSKDYYKKIGKAWKRGYLLFGPPGTGKSTMIAAMANLLE 268
>At1g79560.1 68414.m09275 FtsH protease, putative contains
similarity to chloroplast FtsH protease GI:5804782 from
[Nicotiana tabacum]
Length = 1008
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 493 DGRESADSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDI 672
D E+ E+V G D + ++ + + + + +P + +A +GVLL GPPG K +
Sbjct: 484 DVSETKSMYKEVVLGGD--VWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTL 541
Query: 673 LARAVAHHTECTFI 714
AR +A + F+
Sbjct: 542 FARTLAKESGLPFV 555
>At5g57480.1 68418.m07183 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 520
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST+E + ++ ++I + ++ + + G A +G LLYGPPG K + A+A+
Sbjct: 200 STFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Query: 694 H 696
+
Sbjct: 260 Y 260
>At5g40000.1 68418.m04851 AAA-type ATPase family protein BCS1
nuclear gene encoding mitochondrial protein - Homo
sapiens, EMBL:AF026849 contains Pfam profile: ATPase
family PF00004
Length = 470
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 595 ELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
E + +G A +G LLYGPPG K + A+A+
Sbjct: 231 EYYKKIGKAWKRGYLLYGPPGTGKSTMISAMAN 263
>At4g25835.1 68417.m03716 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 506
Score = 31.5 bits (68), Expect = 0.68
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
ST++ + + ++I E ++ + ++ G A +G LLYGPPG K + A+A+
Sbjct: 200 STFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Query: 694 H 696
+
Sbjct: 260 Y 260
>At3g28610.1 68416.m03571 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 473
Score = 31.1 bits (67), Expect = 0.90
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 514 STYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
+T+E + K+ ++I + + + +G A +G LLYGPPG K + A+A+
Sbjct: 199 ATFETLAMDPKKKEQILNDLAAFNNGKDYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMAN 258
>At3g28510.1 68416.m03561 AAA-type ATPase family protein contains
Pfam profile: PF00004 ATPase family
Length = 530
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 514 STYEMVGGLDKQIKE-IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVA 690
+T+E + +D + KE IK+ + K + + +G +G LL+GPPG K + A+A
Sbjct: 206 ATFETLA-MDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYLLFGPPGTGKSTMIAAIA 264
Query: 691 H 693
+
Sbjct: 265 N 265
>At1g67120.1 68414.m07636 midasin-related similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q12019)
[Saccharomyces cerevisiae]; similar to Midasin
(MIDAS-containing protein) (Swiss-Prot:Q9NU22) [Homo
sapiens]; contains Prosite PS00017: ATP/GTP-binding site
motif A (P-loop)
Length = 5336
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 508 ADSTYEMVGGLDK-QIKEIKEVIELPVKHPELFD--ALGIAQPKGVLLYGPPGHWKDILA 678
AD + LD + E E+ + + F+ +L ++Q + VLLYGP G K L
Sbjct: 311 ADEPQMKIRRLDTWDVNSFSEPFEIHSRVKKSFEMVSLAVSQKRPVLLYGPSGSGKSALI 370
Query: 679 RAVA 690
R +A
Sbjct: 371 RKLA 374
>At1g21690.1 68414.m02714 replication factor C 37 kDa, putative
Similar to SWISS-PROT:P35249 activator 1 37 kDa subunit
(Replication factor C 37 kDa subunit, A1 37 kDa subunit,
RF-C 37 kDa subunit, RFC37) [Homo sapiens]; contains
Pfam domain, PF00004: ATPase, AAA family
Length = 339
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 553 KEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
K++K+V L + L A +L YGPPG K A A+AH
Sbjct: 18 KQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAH 64
>At1g60700.1 68414.m06833 forkhead-associated domain-containing
protein / FHA domain-containing protein contains
similarity to nucleolar protein GI:2384719 from [Mus
musculus]
Length = 525
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 371 DLDKNVDINDVTANCRVALRNES-YTLHKILPNKVDPL 481
DLD N DI D + R LR ES + ++ N DPL
Sbjct: 64 DLDNNADIGDGDEDIRNCLRPESDFWFKNLMDNPYDPL 101
>At3g29185.2 68416.m03659 expressed protein
Length = 411
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 275 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 376
+ ++G V ++ D+KKV VH EGK DL
Sbjct: 329 MNDKGQVVQDISSTSDEKKVTTNVHWEGKMSKDL 362
>At3g29185.1 68416.m03658 expressed protein
Length = 433
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 275 LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 376
+ ++G V ++ D+KKV VH EGK DL
Sbjct: 329 MNDKGQVVQDISSTSDEKKVTTNVHWEGKMSKDL 362
>At1g08270.1 68414.m00913 expressed protein low similarity to
SP|P46467 SKD1 protein (Vacuolar sorting protein 4b)
{Mus musculus}
Length = 126
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 499 RESADSTYEMVGGLDKQIKEIKEVIELPVKHPELF 603
RE + + +V GL+ + +KE + LPV P+ F
Sbjct: 85 REKPNVKWTVVAGLESAKQALKEAVILPVNFPQFF 119
>At3g30842.1 68416.m03968 ABC transporter protein, putative similar
to pleiotropic drug resistance like protein [Nicotiana
tabacum] GI:20522008, ABC1 protein [Nicotiana
plumbaginifolia] GI:14331118; contains Pfam profile
PF00005: ABC transporter
Length = 1406
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 598 LFDALGIAQP-KGVLLYGPPGHWKDILARAVAHHTE 702
L D GI +P + LL GPPG K L +A++ TE
Sbjct: 162 LNDVSGIIKPGRLTLLLGPPGSGKSTLLKALSGKTE 197
>At5g20520.1 68418.m02438 expressed protein
Length = 308
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 649 PPGHWKDILARAVAHHTECTFI 714
PP H K + A+A A + +CTF+
Sbjct: 247 PPFHMKMLYAKAAARNPQCTFV 268
>At5g13460.1 68418.m01549 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 443
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 108 MEVDTVKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMYARSFSSCKNR 287
++VDT + + +TK E+ +++++K +LRR + + + + +S S + R
Sbjct: 195 LKVDTNGQKRWDDSLLTKEEKEAVVMSKKEASLRRERIKEYAVT-----HRKSAESYQKR 249
Query: 288 DRTSEK-WLNQWI 323
T K WL++W+
Sbjct: 250 SNTKWKYWLDEWV 262
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 236 QR*SSYVREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE--GKFVVDLDKNVDIN-DVT 406
QR +S +R+EL +LQE+ V E ++ ++K+V + + K V L + V + +
Sbjct: 211 QREASALRDELDMLQEENENVLEKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLL 270
Query: 407 ANCRVALRNESYTLH 451
+ ALR L+
Sbjct: 271 SRKEAALRQREAALN 285
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = +2
Query: 236 QR*SSYVREELQLLQEQGSYVGEVVKPMDKKKVLVKVHPE--GKFVVDLDKNVDIN-DVT 406
QR +S +R+EL +LQE+ V E ++ ++K+V + + K V L + V + +
Sbjct: 211 QREASALRDELDMLQEENENVLEKLRRAEEKRVEAEARAKELEKQVASLGEGVSLEAKLL 270
Query: 407 ANCRVALRNESYTLH 451
+ ALR L+
Sbjct: 271 SRKEAALRQREAALN 285
>At2g46620.1 68415.m05815 AAA-type ATPase family protein contains
Pfam profile: ATPase family PF00004
Length = 491
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 556 EIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGHWKDILARAVAH 693
++K +E +K + ++ LG + LLYGP G K A+A+
Sbjct: 208 KVKSDLESFLKGKQYYNRLGRVWKRSYLLYGPSGTGKSSFVAAMAN 253
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,678,454
Number of Sequences: 28952
Number of extensions: 335628
Number of successful extensions: 1122
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1824072800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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