Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0213
         (799 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0501 + 4345522-4345720,4346598-4347167,4347294-4347366,435...    28   9.9  

>08_01_0501 +
           4345522-4345720,4346598-4347167,4347294-4347366,
           4351133-4353092,4353465-4353840,4353932-4354326,
           4354597-4354765,4355444-4355518,4357699-4357826,
           4357988-4358213,4358290-4358417,4358505-4358768
          Length = 1520

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = +3

Query: 210 LISCSNKCSTSIDVANLRLSHHGSVIILLPSSLPR 314
           +I CSNK   S+   +LR+   G+++   P S+P+
Sbjct: 809 IIICSNKGFRSLTYFSLRIKRCGTLLEFEPESMPK 843


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,359,868
Number of Sequences: 37544
Number of extensions: 382693
Number of successful extensions: 892
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)