Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0213
         (799 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding pr...    25   3.6  
AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding pr...    25   3.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    25   3.6  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   6.3  

>AY330176-1|AAQ16282.1|  179|Anopheles gambiae odorant-binding
           protein AgamOBP49 protein.
          Length = 179

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 163 PNLPPNSHLLDICF 122
           PN+PPNS    +CF
Sbjct: 62  PNIPPNSSDFPVCF 75


>AJ618926-1|CAF02005.1|  315|Anopheles gambiae odorant-binding
           protein OBPjj6b protein.
          Length = 315

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 163 PNLPPNSHLLDICF 122
           PN+PPNS    +CF
Sbjct: 62  PNIPPNSSDFPVCF 75


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
 Frame = -2

Query: 450 SNKNTAFTVNNEAEN----PLKQYFLSVPSMPSAIVPITG 343
           +NK  A  +   A N    P  +   S PS+P+ IVP  G
Sbjct: 24  ANKRRALNIRTGANNIGVLPASKMPTSYPSLPAPIVPSPG 63


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +2

Query: 377 GTDRKYCFNGFSASLFTVNAVFLFDYLKVTNKNILI 484
           G   KY  NG S     V  +F    L V N N LI
Sbjct: 110 GGKNKYLINGKSVQNKRVQDLFCSVQLNVNNPNFLI 145


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 809,848
Number of Sequences: 2352
Number of extensions: 16851
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83992206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)