Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0213
(799 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25941-1|AAA59495.1| 615|Homo sapiens integral nuclear envelope... 42 0.002
BC020079-1|AAH20079.1| 615|Homo sapiens lamin B receptor protein. 42 0.002
AK222834-1|BAD96554.1| 615|Homo sapiens lamin B receptor varian... 42 0.002
AB209514-1|BAD92751.1| 616|Homo sapiens lamin B receptor varian... 42 0.002
L25931-1|AAA59494.1| 615|Homo sapiens lamin B receptor protein. 40 0.008
BC012857-1|AAH12857.1| 418|Homo sapiens transmembrane 7 superfa... 37 0.097
BC038353-1|AAH38353.1| 391|Homo sapiens TM7SF2 protein protein. 36 0.13
BC009052-1|AAH09052.1| 418|Homo sapiens transmembrane 7 superfa... 36 0.13
AF096304-1|AAD09765.1| 418|Homo sapiens putative sterol reducta... 36 0.13
AF096303-1|AAD09769.1| 418|Homo sapiens putative sterol reducta... 36 0.13
AF048704-1|AAC21457.1| 589|Homo sapiens lamin B receptor homolo... 36 0.22
AF023676-1|AAC21450.1| 589|Homo sapiens lamin B receptor homolo... 36 0.22
X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 ... 33 0.90
U02519-1|AAA18942.1| 199|Homo sapiens collagen type IV alpha 3 ... 33 0.90
S55790-1|AAB19637.1| 218|Homo sapiens type IV collagen alpha 3 ... 33 0.90
M92993-1|AAA21610.1| 285|Homo sapiens alpha-3 type IV collagen ... 33 0.90
M81379-1|AAA51556.1| 340|Homo sapiens alpha-3 type IV collagen ... 33 0.90
AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen... 33 0.90
AF258351-1|AAF72632.1| 245|Homo sapiens tumstatin protein. 33 0.90
AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein. 33 0.90
BC070068-1|AAH70068.1| 543|Homo sapiens headcase homolog (Droso... 31 6.4
AL031772-1|CAB94782.1| 543|Homo sapiens RP1-225E12.1 protein. 31 6.4
AB033496-1|BAA85333.1| 543|Homo sapiens homolog of Drosophila h... 31 6.4
AB033492-1|BAA85322.1| 543|Homo sapiens homolog of Drosophila h... 31 6.4
>L25941-1|AAA59495.1| 615|Homo sapiens integral nuclear envelope
inner membrane protein protein.
Length = 615
Score = 42.3 bits (95), Expect = 0.002
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +2
Query: 317 LVQSVFLAVPVMGTIADG---MDGTDRKYCFNGFSASLFTVNAVFLFDYLKVTNKNILIN 487
L+Q +F +P+ G + +G +DG KY NGF A + T +AV + + + +
Sbjct: 267 LIQVLFYLLPI-GKVVEGTPLIDGRRLKYRLNGFYAFILT-SAVIGTSLFQGVEFHYVYS 324
Query: 488 EFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHIKGLNM 667
F+Q ++ + ++ ++ +L+ +G +YDFF+G E++P I ++
Sbjct: 325 HFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSP-ASSGNAVYDFFIGRELNPRIGTFDL 383
Query: 668 K 670
K
Sbjct: 384 K 384
>BC020079-1|AAH20079.1| 615|Homo sapiens lamin B receptor protein.
Length = 615
Score = 42.3 bits (95), Expect = 0.002
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +2
Query: 317 LVQSVFLAVPVMGTIADG---MDGTDRKYCFNGFSASLFTVNAVFLFDYLKVTNKNILIN 487
L+Q +F +P+ G + +G +DG KY NGF A + T +AV + + + +
Sbjct: 267 LIQVLFYLLPI-GKVVEGTPLIDGRRLKYRLNGFYAFILT-SAVIGTSLFQGVEFHYVYS 324
Query: 488 EFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHIKGLNM 667
F+Q ++ + ++ ++ +L+ +G +YDFF+G E++P I ++
Sbjct: 325 HFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSP-ASSGNAVYDFFIGRELNPRIGTFDL 383
Query: 668 K 670
K
Sbjct: 384 K 384
>AK222834-1|BAD96554.1| 615|Homo sapiens lamin B receptor variant
protein.
Length = 615
Score = 42.3 bits (95), Expect = 0.002
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +2
Query: 317 LVQSVFLAVPVMGTIADG---MDGTDRKYCFNGFSASLFTVNAVFLFDYLKVTNKNILIN 487
L+Q +F +P+ G + +G +DG KY NGF A + T +AV + + + +
Sbjct: 267 LIQVLFYLLPI-GKVVEGTPLIDGRRLKYRLNGFYAFILT-SAVIGTSLFQGVEFHYVYS 324
Query: 488 EFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHIKGLNM 667
F+Q ++ + ++ ++ +L+ +G +YDFF+G E++P I ++
Sbjct: 325 HFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSP-ASSGNAVYDFFIGRELNPRIGTFDL 383
Query: 668 K 670
K
Sbjct: 384 K 384
>AB209514-1|BAD92751.1| 616|Homo sapiens lamin B receptor variant
protein.
Length = 616
Score = 42.3 bits (95), Expect = 0.002
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 3/121 (2%)
Frame = +2
Query: 317 LVQSVFLAVPVMGTIADG---MDGTDRKYCFNGFSASLFTVNAVFLFDYLKVTNKNILIN 487
L+Q +F +P+ G + +G +DG KY NGF A + T +AV + + + +
Sbjct: 268 LIQVLFYLLPI-GKVVEGTPLIDGRRLKYRLNGFYAFILT-SAVIGTSLFQGVEFHYVYS 325
Query: 488 EFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHIKGLNM 667
F+Q ++ + ++ ++ +L+ +G +YDFF+G E++P I ++
Sbjct: 326 HFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSP-ASSGNAVYDFFIGRELNPRIGTFDL 384
Query: 668 K 670
K
Sbjct: 385 K 385
>L25931-1|AAA59494.1| 615|Homo sapiens lamin B receptor protein.
Length = 615
Score = 40.3 bits (90), Expect = 0.008
Identities = 29/121 (23%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Frame = +2
Query: 317 LVQSVFLAVPVMGTIADG---MDGTDRKYCFNGFSASLFTVNAVFLFDYLKVTNKNILIN 487
L+Q +F +P+ G + +G +DG KY NGF + T +AV + + + +
Sbjct: 267 LIQVLFYLLPI-GKVVEGTPLIDGRRLKYRLNGFYPFILT-SAVIGTSLFQGVEFHYVYS 324
Query: 488 EFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHIKGLNM 667
F+Q ++ + ++ ++ +L+ +G +YDFF+G E++P I ++
Sbjct: 325 HFLQFALAATVFCVVLSVYLYMRSLKAPRNDLSP-ASSGNAVYDFFIGRELNPRIGTFDL 383
Query: 668 K 670
K
Sbjct: 384 K 384
>BC012857-1|AAH12857.1| 418|Homo sapiens transmembrane 7
superfamily member 2 protein.
Length = 418
Score = 36.7 bits (81), Expect = 0.097
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +2
Query: 278 FSYNSLAFIIAQILVQSVFLAVPVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLF 448
+S +L +A + +Q+ +P +A+G + D+ +Y NGF A + T V L
Sbjct: 58 WSPRALLLWLAWLGLQAALYLLPAR-KVAEGQELKDKSRLRYPINGFQALVLTALLVGLG 116
Query: 449 DYLKVTNKNILINEFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFM 628
+ L + L+ F LF KA+ L G +G +YDFF+
Sbjct: 117 MSAGLP-LGALPEMLLPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFL 175
Query: 629 GCEIHPHI 652
G E++P I
Sbjct: 176 GREVNPRI 183
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 144 EFGGRLGSAILIFLIPITVFAILIS 218
EFGG LG+A L+ L+P T+F +L++
Sbjct: 12 EFGGPLGAAALLLLLPATMFHLLLA 36
>BC038353-1|AAH38353.1| 391|Homo sapiens TM7SF2 protein protein.
Length = 391
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +2
Query: 278 FSYNSLAFIIAQILVQSVFLAVPVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLF 448
+S +L +A + +Q+ +P +A+G + D+ +Y NGF A + T V L
Sbjct: 58 WSPRALLLWLAWLGLQAALYLLPAR-KVAEGQELKDKSRLRYPINGFQALVLTALLVGLG 116
Query: 449 DYLKVTNKNILINEFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFM 628
+ L + L+ F LF KA+ L G +G +YDFF+
Sbjct: 117 MSAGLP-LGALPEMLLPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFL 175
Query: 629 GCEIHPHI 652
G E++P I
Sbjct: 176 GRELNPRI 183
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 144 EFGGRLGSAILIFLIPITVFAILIS 218
EFGG LG+A L+ L+P T+F +L++
Sbjct: 12 EFGGPLGAAALLLLLPATMFHLLLA 36
>BC009052-1|AAH09052.1| 418|Homo sapiens transmembrane 7
superfamily member 2 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +2
Query: 278 FSYNSLAFIIAQILVQSVFLAVPVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLF 448
+S +L +A + +Q+ +P +A+G + D+ +Y NGF A + T V L
Sbjct: 58 WSPRALLLWLAWLGLQAALYLLPAR-KVAEGQELKDKSRLRYPINGFQALVLTALLVGLG 116
Query: 449 DYLKVTNKNILINEFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFM 628
+ L + L+ F LF KA+ L G +G +YDFF+
Sbjct: 117 MSAGLP-LGALPEMLLPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFL 175
Query: 629 GCEIHPHI 652
G E++P I
Sbjct: 176 GRELNPRI 183
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 144 EFGGRLGSAILIFLIPITVFAILIS 218
EFGG LG+A L+ L+P T+F +L++
Sbjct: 12 EFGGPLGAAALLLLLPATMFHLLLA 36
>AF096304-1|AAD09765.1| 418|Homo sapiens putative sterol reductase
SR-1 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +2
Query: 278 FSYNSLAFIIAQILVQSVFLAVPVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLF 448
+S +L +A + +Q+ +P +A+G + D+ +Y NGF A + T V L
Sbjct: 58 WSPRALLLWLAWLGLQAALYLLPAR-KVAEGQELKDKSRLRYPINGFQALVLTALLVGLG 116
Query: 449 DYLKVTNKNILINEFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFM 628
+ L + L+ F LF KA+ L G +G +YDFF+
Sbjct: 117 MSAGLP-LGALPEMLLPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFL 175
Query: 629 GCEIHPHI 652
G E++P I
Sbjct: 176 GRELNPRI 183
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 144 EFGGRLGSAILIFLIPITVFAILIS 218
EFGG LG+A L+ L+P T+F +L++
Sbjct: 12 EFGGPLGAAALLLLLPATMFHLLLA 36
>AF096303-1|AAD09769.1| 418|Homo sapiens putative sterol reductase
SR-1 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.13
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Frame = +2
Query: 278 FSYNSLAFIIAQILVQSVFLAVPVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLF 448
+S +L +A + +Q+ +P +A+G + D+ +Y NGF A + T V L
Sbjct: 58 WSPRALLLWLAWLGLQAALYLLPAR-KVAEGQELKDKSRLRYPINGFQALVLTALLVGLG 116
Query: 449 DYLKVTNKNILINEFIQLSMFLIYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFM 628
+ L + L+ F LF KA+ L G +G +YDFF+
Sbjct: 117 MSAGLP-LGALPEMLLPLAFVATLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFL 175
Query: 629 GCEIHPHI 652
G E++P I
Sbjct: 176 GRELNPRI 183
Score = 33.1 bits (72), Expect = 1.2
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 144 EFGGRLGSAILIFLIPITVFAILIS 218
EFGG LG+A L+ L+P T+F +L++
Sbjct: 12 EFGGPLGAAALLLLLPATMFHLLLA 36
>AF048704-1|AAC21457.1| 589|Homo sapiens lamin B receptor homolog
TM7SF2 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.22
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 344 PVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLFDYLKVTNKNILINEFIQLSMFL 514
P+ +A+G + D+ +Y NGF A + T V L + L + L+
Sbjct: 213 PLGPAVAEGQELKDKSRLRYPINGFQALVLTALLVGLGMSAGLP-LGALPEMLLPLAFVA 271
Query: 515 IYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHI 652
F LF KA+ L G +G +YDFF+G E++P I
Sbjct: 272 TLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFLGRELNPRI 317
>AF023676-1|AAC21450.1| 589|Homo sapiens lamin B receptor homolog
TM7SF2 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.22
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 344 PVMGTIADGMDGTDR---KYCFNGFSASLFTVNAVFLFDYLKVTNKNILINEFIQLSMFL 514
P+ +A+G + D+ +Y NGF A + T V L + L + L+
Sbjct: 213 PLGPAVAEGQELKDKSRLRYPINGFQALVLTALLVGLGMSAGLP-LGALPEMLLPLAFVA 271
Query: 515 IYWPFF*VLFCISKAKDWQEKELNAYGKTGYILYDFFMGCEIHPHI 652
F LF KA+ L G +G +YDFF+G E++P I
Sbjct: 272 TLTAFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDFFLGRELNPRI 317
>X80031-1|CAA56335.1| 1670|Homo sapiens type IV collagen alpha 3 chain
protein.
Length = 1670
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 1468 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 1518
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 1519 YSYWLSTPALMPMNMAPITGRA 1540
>U02519-1|AAA18942.1| 199|Homo sapiens collagen type IV alpha 3
protein.
Length = 199
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 30 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 80
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 81 YSYWLSTPALMPMNMAPITGIA 102
>S55790-1|AAB19637.1| 218|Homo sapiens type IV collagen alpha 3
chain protein.
Length = 218
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 16 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 66
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 67 YSYWLSTPALMPMNMAPITGRA 88
>M92993-1|AAA21610.1| 285|Homo sapiens alpha-3 type IV collagen
protein.
Length = 285
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 83 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 133
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 134 YSYWLSTPALMPMNMAPITGRA 155
>M81379-1|AAA51556.1| 340|Homo sapiens alpha-3 type IV collagen
protein.
Length = 340
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 138 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 188
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 189 YSYWLSTPALMPMNMAPITGRA 210
>AJ288487-1|CAC36101.1| 1670|Homo sapiens alpha3 type IV collagen
protein.
Length = 1670
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 1468 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 1518
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 1519 YSYWLSTPALMPMNMAPITGRA 1540
>AF258351-1|AAF72632.1| 245|Homo sapiens tumstatin protein.
Length = 245
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 43 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 93
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 94 YSYWLSTPALMPMNMAPITGRA 115
>AC097662-1|AAY24251.1| 1084|Homo sapiens unknown protein.
Length = 1084
Score = 33.5 bits (73), Expect = 0.90
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -2
Query: 576 FSCQSFAFEIQNNTQKNGQYIRNIESCINSFMRI-FLFVTFK*SNKNTAFTVNNEAENPL 400
+S SF F +Q N + +GQ + + SC+ F + FLF N N V N A
Sbjct: 882 YSGFSFLF-VQGNQRAHGQDLGTLGSCLQRFTTMPFLF-----CNVN---DVCNFASRND 932
Query: 399 KQYFLSVPS-MPSAIVPITGTA 337
Y+LS P+ MP + PITG A
Sbjct: 933 YSYWLSTPALMPMNMAPITGRA 954
>BC070068-1|AAH70068.1| 543|Homo sapiens headcase homolog
(Drosophila) protein.
Length = 543
Score = 30.7 bits (66), Expect = 6.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 449 DYLKVT--NKNILINEFIQLSMFLIYWPFF*VLF-CISKAKDWQEKEL--NAYGKTGYIL 613
DY KV N++ + ++ L F + V F CI +A+ W EK+ N + K GY L
Sbjct: 112 DYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKKGYDL 171
Query: 614 YDFFMGCEI-HPHIK 655
F C H+K
Sbjct: 172 AFRFCSCRCGQGHLK 186
>AL031772-1|CAB94782.1| 543|Homo sapiens RP1-225E12.1 protein.
Length = 543
Score = 30.7 bits (66), Expect = 6.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 449 DYLKVT--NKNILINEFIQLSMFLIYWPFF*VLF-CISKAKDWQEKEL--NAYGKTGYIL 613
DY KV N++ + ++ L F + V F CI +A+ W EK+ N + K GY L
Sbjct: 112 DYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKKGYDL 171
Query: 614 YDFFMGCEI-HPHIK 655
F C H+K
Sbjct: 172 AFRFCSCRCGQGHLK 186
>AB033496-1|BAA85333.1| 543|Homo sapiens homolog of Drosophila
headcase protein.
Length = 543
Score = 30.7 bits (66), Expect = 6.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 449 DYLKVT--NKNILINEFIQLSMFLIYWPFF*VLF-CISKAKDWQEKEL--NAYGKTGYIL 613
DY KV N++ + ++ L F + V F CI +A+ W EK+ N + K GY L
Sbjct: 112 DYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKKGYDL 171
Query: 614 YDFFMGCEI-HPHIK 655
F C H+K
Sbjct: 172 AFRFCSCRCGQGHLK 186
>AB033492-1|BAA85322.1| 543|Homo sapiens homolog of Drosophila
headcase protein.
Length = 543
Score = 30.7 bits (66), Expect = 6.4
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +2
Query: 449 DYLKVT--NKNILINEFIQLSMFLIYWPFF*VLF-CISKAKDWQEKEL--NAYGKTGYIL 613
DY KV N++ + ++ L F + V F CI +A+ W EK+ N + K GY L
Sbjct: 112 DYQKVVCNNEHCPCSTWMHLQCFYEWESSILVQFNCIGRARSWNEKQCRQNMWTKKGYDL 171
Query: 614 YDFFMGCEI-HPHIK 655
F C H+K
Sbjct: 172 AFRFCSCRCGQGHLK 186
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,693,820
Number of Sequences: 237096
Number of extensions: 2365119
Number of successful extensions: 3972
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3968
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -