Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0211
         (803 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    29   0.17 
EF426167-1|ABO26410.1|  155|Anopheles gambiae unknown protein.         25   3.6  
EF426166-1|ABO26409.1|  155|Anopheles gambiae unknown protein.         25   3.6  
EF426162-1|ABO26405.1|  155|Anopheles gambiae unknown protein.         25   3.6  
AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   3.6  
EF426165-1|ABO26408.1|  155|Anopheles gambiae unknown protein.         24   4.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   8.3  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 19/67 (28%), Positives = 34/67 (50%)
 Frame = +1

Query: 277  QQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLSIEYNEVLETNKKLQNVVD 456
            QQ+K  +E+     KE +    +  +++K+N  LK ++ +   E  +V   NK      D
Sbjct: 871  QQIKQHKEKMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVRNENK------D 924

Query: 457  GFDQCSG 477
            G+D+ SG
Sbjct: 925  GYDRISG 931


>EF426167-1|ABO26410.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 619 LSISSEYRLCVFWAFRFVISNCKLEIQSCA*ESLTFSQLRVGATQHTHRCTDRSRL 452
           L ISS   +C+F+   F  S   L    CA  S ++S  + GA   +  CT  S++
Sbjct: 4   LKISSFLAVCLFFGALFAQSVSALRCYQCASPS-SWSDCQAGA--QSVECTSASQM 56


>EF426166-1|ABO26409.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 619 LSISSEYRLCVFWAFRFVISNCKLEIQSCA*ESLTFSQLRVGATQHTHRCTDRSRL 452
           L ISS   +C+F+   F  S   L    CA  S ++S  + GA   +  CT  S++
Sbjct: 4   LKISSFLAVCLFFGALFAQSVSALRCYQCASPS-SWSDCQAGA--QSVECTSASQM 56


>EF426162-1|ABO26405.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = -2

Query: 619 LSISSEYRLCVFWAFRFVISNCKLEIQSCA*ESLTFSQLRVGATQHTHRCTDRSRL 452
           L ISS   +C+F+   F  S   L    CA  S ++S  + GA   +  CT  S++
Sbjct: 4   LKISSFLAVCLFFGALFAQSVSALRCYQCASPS-SWSDCQAGA--QSVECTSASQM 56


>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 226 DQRYQSSSS-CDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQLS 402
           D++Y++ ++  +++   LQ L TSR     L    +D + +   ++   T+    + Q +
Sbjct: 65  DKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQVESLLANETVTVDGMKQEA 124

Query: 403 IEY 411
           IEY
Sbjct: 125 IEY 127


>EF426165-1|ABO26408.1|  155|Anopheles gambiae unknown protein.
          Length = 155

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -2

Query: 619 LSISSEYRLCVFWAFRFVISNCKLEIQSCA*ESLTFSQLRVGATQHTHRCTDRSRL 452
           L ISS   +C+F+   F  S   L    CA    ++S  + GA   +  CT  S++
Sbjct: 4   LKISSFLAVCLFFGALFAQSVSALRCYQCA-SPXSWSDCQAGA--QSVECTSASQM 56


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 580  AFRFVISNCKLEIQSCA*ESL--TFSQLRVGATQH 482
            +F+  ISNC++EIQ    E L  T      G+ QH
Sbjct: 1510 SFQSRISNCRIEIQPAYGEILQKTKQNTFAGSMQH 1544


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = -2

Query: 580  AFRFVISNCKLEIQSCA*ESL--TFSQLRVGATQH 482
            +F+  ISNC++EIQ    E L  T      G+ QH
Sbjct: 1511 SFQSRISNCRIEIQPAYGEILQKTKQNTFAGSMQH 1545


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = -2

Query: 709 ECVLSESPPVKSIVGMSHSEVVITVPEAGSLSISSEYRLCVFWAFRFVISNCKLEIQS 536
           E VL+E  P  S +     E  I       +  +  + LC +  + F    CK++IQS
Sbjct: 2   EAVLNEKFPDLSSITSDLEEHEIFPTSNAIIWTTVTHILCAYLCYIFSKFACKIQIQS 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,198
Number of Sequences: 2352
Number of extensions: 13830
Number of successful extensions: 42
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)