Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0211
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             27   0.20 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    25   1.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   1.4  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    22   5.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   7.7  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   7.7  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   7.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 24/98 (24%), Positives = 41/98 (41%)
 Frame = +1

Query: 217  QNDDQRYQSSSSCDQLQMALQQLKTSREQCQQLLKEREDNEVETLQVIKKNTMLKGQLSQ 396
            Q   Q+ Q      Q Q   QQ +  + Q QQ  ++++  + +  Q  K+   + G + Q
Sbjct: 1502 QQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQ--KEYGAVSGLVVQ 1559

Query: 397  LSIEYNEVLETNKKLQNVVDGFDQCSGEYVESLQLSAD 510
            L   YN     + +  N      Q SGE V  ++ S +
Sbjct: 1560 LQRGYNSGNNRSGEQANSQQQQQQQSGEPVIGMEDSVE 1597


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 403 IEYNEVLETNKKLQNVVDGFD 465
           +EY  VL  + ++Q V+ GFD
Sbjct: 371 LEYEYVLAVSNRIQKVIYGFD 391


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = -1

Query: 521 FDFQSAESWSDSTYSPLH 468
           FD Q  E W D  Y  +H
Sbjct: 305 FDIQDLERWRDRIYEAIH 322


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 260 NFKWLFNN*KHHGNSVNN 313
           N+K+ +NN  ++ N+ NN
Sbjct: 328 NYKYNYNNNNYNNNNYNN 345


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 343 RPRCLLSLLTVVDTVPVMFSVVEEPFEVGHNLTS 242
           +P C   LLT   T   +   VE P +V  N T+
Sbjct: 147 QPMCSPKLLTFDLTTSQLLKQVEIPHDVAVNATT 180


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 343 RPRCLLSLLTVVDTVPVMFSVVEEPFEVGHNLTS 242
           +P C   LLT   T   +   VE P +V  N T+
Sbjct: 147 QPMCSPKLLTFDLTTSQLLKQVEIPHDVAVNATT 180


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -2

Query: 343 RPRCLLSLLTVVDTVPVMFSVVEEPFEVGHNLTS 242
           +P C   LLT   T   +   VE P +V  N T+
Sbjct: 147 QPMCSPKLLTFDLTTSQLLKQVEIPHDVAVNATT 180


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,100
Number of Sequences: 438
Number of extensions: 4503
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)