Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0210
         (791 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.6  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   6.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.5  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 161 VADIPLLVHHPTDLVYREIHHF 96
           V  + L++H  T L+YR   HF
Sbjct: 678 VIGMNLIIHVGTQLIYRPFSHF 699


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 3/23 (13%)
 Frame = -3

Query: 768 PMXPDPKPNQSPLL---GSTRTS 709
           P+ P+P P  SPL+   GS+ TS
Sbjct: 87  PVAPEPAPLASPLVQEPGSSTTS 109


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -3

Query: 717 RTSPMGPTIIVICGYNDV--NIFYNTLERLV*FFSFKLELKKS 595
           + + M PT I + G+ DV  N+F + L  +V +    L+ + S
Sbjct: 375 KATEMSPTDISLVGFFDVNRNLFKSLLATMVTYLVVLLQFQIS 417


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 159 CGYSASCPSSHGSRLP*NSPF*MVYDF 79
           CG+    PS HG      +P+   YD+
Sbjct: 467 CGFGPWKPSMHGGVCDPYTPWHTFYDY 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,311
Number of Sequences: 336
Number of extensions: 3624
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)