Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0210
(791 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 99 5e-21
02_04_0017 + 18937774-18937864,18938505-18940945 99 5e-21
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 94 1e-19
01_06_0662 + 30987187-30987277,30987825-30990214 94 1e-19
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 62 4e-10
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 54 1e-07
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 47 2e-05
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 47 2e-05
03_05_0511 + 25056018-25059107 46 3e-05
02_04_0148 - 20198407-20201424 46 5e-05
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 44 2e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 43 3e-04
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 42 6e-04
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 41 0.001
02_04_0462 + 23131433-23132836 33 0.20
03_01_0548 + 4099386-4099847,4100435-4101316 31 0.79
03_01_0547 + 4093196-4093657,4094267-4095148 31 0.79
03_01_0544 + 4082528-4082989,4083585-4084466 31 0.79
03_01_0543 + 4076981-4077442,4078145-4079026 31 0.79
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 30 2.4
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 30 2.4
05_04_0199 + 18980017-18980759,18981478-18981532 29 3.2
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 4.2
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 29 5.6
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 28 7.4
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 28 7.4
12_01_0623 - 5131825-5131953,5133358-5133540,5133961-5134257 28 9.8
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 28 9.8
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 28 9.8
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 98.7 bits (235), Expect = 5e-21
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R TDTR DE +R ITIKST IS+F+E+ ++ L + E+ +LINLIDSPGHVD
Sbjct: 55 RMTDTRADEAERGITIKSTGISLFYEMSDESLKLY----KGERDGNEYLINLIDSPGHVD 110
Query: 440 FSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLK 619
FSSEVTAALR+TDGAL + + + L + K FL ++
Sbjct: 111 FSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVE 170
Query: 620 LKN-YTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMGWAF 778
+ Y S V+ + + + +G+V+V P KG F +GL GWAF
Sbjct: 171 GEEAYQTFSRVIENANVIMATYEDTL---LGDVQVYPEKGT-VAFSAGLHGWAF 220
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 221
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVA 41
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 690
QTETVLRQA+ ERI+P+L +NKMDR YQTF R++EN NVI+ATY D
Sbjct: 138 QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRVIENANVIMATYED 194
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 98.7 bits (235), Expect = 5e-21
Identities = 67/174 (38%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R TDTR DE +R ITIKST IS+F+E+ ++ L + E+ +LINLIDSPGHVD
Sbjct: 55 RMTDTRADEAERGITIKSTGISLFYEMSDESLKLY----KGERDGNEYLINLIDSPGHVD 110
Query: 440 FSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLK 619
FSSEVTAALR+TDGAL + + + L + K FL ++
Sbjct: 111 FSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVE 170
Query: 620 LKN-YTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMGWAF 778
+ Y S V+ + + + +G+V+V P KG F +GL GWAF
Sbjct: 171 GEEAYQTFSRVIENANVIMATYEDTL---LGDVQVYPEKGT-VAFSAGLHGWAF 220
Score = 74.1 bits (174), Expect = 1e-13
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 221
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVA 41
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 690
QTETVLRQA+ ERI+P+L +NKMDR YQTF R++EN NVI+ATY D
Sbjct: 138 QTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRVIENANVIMATYED 194
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 94.3 bits (224), Expect = 1e-19
Identities = 64/174 (36%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R TDTR DE +R ITIKST IS+++E+ + L + ++ +LINLIDSPGH+D
Sbjct: 55 RMTDTRADEAERGITIKSTGISLYYEMTDAAL----RSFEGKRDGNSYLINLIDSPGHID 110
Query: 440 FSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLK 619
FSSEVTAALR+TDGAL + + + L + K FL
Sbjct: 111 FSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQS 170
Query: 620 LKN-YTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMGWAF 778
+ Y S V+ + ++ P+ +G+ V P KG F +GL GWAF
Sbjct: 171 GEEAYQAFSRVIESVNVTMAPYEDK---NLGDCMVAPEKGT-VAFSAGLHGWAF 220
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 221
MV FT +E+R MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVA 41
Score = 67.7 bits (158), Expect = 1e-11
Identities = 39/89 (43%), Positives = 51/89 (57%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGG 699
QTETVLRQ++AERIKP+L +NKMDR YQ F R++E+VNV +A Y D
Sbjct: 138 QTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAYQAFSRVIESVNVTMAPYEDK-- 195
Query: 700 SHG*GACRP*QRALVWFRVWXHGVGFSPS 786
+ G P ++ V F HG F+ S
Sbjct: 196 NLGDCMVAP-EKGTVAFSAGLHGWAFTLS 223
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 93.9 bits (223), Expect = 1e-19
Identities = 65/174 (37%), Positives = 90/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R TD+R DE +R ITIKST IS+++E+ ++ L + ++ +LINLIDSPGHVD
Sbjct: 55 RMTDSRSDEAERGITIKSTGISLYYEMSDESL----KSYKGDRDGNEYLINLIDSPGHVD 110
Query: 440 FSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLK 619
FSSEVTAALR+TDGAL + + + L + K FL +
Sbjct: 111 FSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVG 170
Query: 620 LKN-YTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMGWAF 778
+ Y S V+ + T +G+V+V P KG F +GL GWAF
Sbjct: 171 GEEAYQTFSRVIENANVIM---ATYEDALLGDVQVYPEKGT-VAFSAGLHGWAF 220
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 221
MV FTV+E+R +MDKK NIRNMSV+AHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVA 41
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 690
QTETVLRQA+ ERI+P+L +NKMDR YQTF R++EN NVI+ATY D
Sbjct: 138 QTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSRVIENANVIMATYED 194
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 62.5 bits (145), Expect = 4e-10
Identities = 34/79 (43%), Positives = 49/79 (62%)
Frame = +2
Query: 251 RKTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPG 430
R RFTDTR DEQ+R ++IK+ +S+ E + K +L N++D+PG
Sbjct: 184 RHVRFTDTRVDEQERRVSIKAVPMSLVLE---------------GGNGKSYLCNIMDTPG 228
Query: 431 HVDFSSEVTAALRVTDGAL 487
HV+FS E+TAALR+ DGA+
Sbjct: 229 HVNFSDEMTAALRIADGAV 247
Score = 32.3 bits (70), Expect = 0.45
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 111 TVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
T D + G+ +RN++++ H+ HGK+ D LV +
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQ 171
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/53 (26%), Positives = 26/53 (49%)
Frame = +1
Query: 523 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIAT 681
TE +R A ER+ ++ +NK+DR Y + +E +N +I++
Sbjct: 260 TERAIRHATQERLPIVVVINKVDRLITELKLPPNDAYFKLRHTLEAINDLISS 312
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 54.4 bits (125), Expect = 1e-07
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
++ D + E++R IT+K+ +MF+ L PD +L+NLID+PGHVD
Sbjct: 92 QYLDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDAPS-----YLLNLIDTPGHVD 146
Query: 440 FSSEVTAALRVTDGAL 487
FS EV+ +L GAL
Sbjct: 147 FSYEVSRSLAACQGAL 162
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 153 IRNMSVIAHVDHGKSTLTDSLV 218
+RN S+IAHVDHGKSTL D L+
Sbjct: 57 VRNFSIIAHVDHGKSTLADRLL 78
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 46.8 bits (106), Expect = 2e-05
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +2
Query: 308 KSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
+ T + E E++ + IT+P K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 139 EGTVTMDWMEQEQERGITITSPPTTAFWNK-HRINIIDTPGHVDFTLEVERALRVLDGAI 197
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 46.8 bits (106), Expect = 2e-05
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2
Query: 398 GFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
G+ +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 135 GYQVNIIDTPGHVDFTIEVERALRVLDGAI 164
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 120 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 218
E+ + +RN+ + AH+D GK+TLT+ ++
Sbjct: 57 EVARWRESMDRMRNIGISAHIDSGKTTLTERVL 89
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 46.4 bits (105), Expect = 3e-05
Identities = 30/78 (38%), Positives = 41/78 (52%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGH 433
+ RF D +EQ R IT+KS A+ + G +NLIDSPGH
Sbjct: 46 RLRFMDYLDEEQRRAITMKSAAVVLH--------------------HGGHRVNLIDSPGH 85
Query: 434 VDFSSEVTAALRVTDGAL 487
+DF SEV++A R++D AL
Sbjct: 86 IDFCSEVSSAARLSDSAL 103
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVI 672
QT LRQA ER++P L +NK+DR Y RI+ +VN I
Sbjct: 115 QTHAALRQAFLERLRPCLVLNKLDRLISELHLTPAEAYTRLHRIISDVNSI 165
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +3
Query: 147 RNIRNMSVIAHVDHGKSTLTDSLVS 221
R +RN ++AHVDHGK+TL D LV+
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVA 32
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 45.6 bits (103), Expect = 5e-05
Identities = 29/76 (38%), Positives = 42/76 (55%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R D ++EQ R IT+KS +I++ + + G ++LIDSPGH+D
Sbjct: 55 RVMDHLEEEQRRAITMKSASIAL---------------RRGGEDGGGHRVHLIDSPGHID 99
Query: 440 FSSEVTAALRVTDGAL 487
F SEV+AA R+ D AL
Sbjct: 100 FCSEVSAAARLADSAL 115
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVI 672
QT LRQA ER++P L +NK+DR + +RIV VN I
Sbjct: 127 QTHAALRQAFVERLRPCLVLNKVDRLVAELRLTPAEAHARLRRIVSEVNSI 177
Score = 37.1 bits (82), Expect = 0.016
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +3
Query: 147 RNIRNMSVIAHVDHGKSTLTDSLVS 221
R +RN ++AHVDHGK++L D L++
Sbjct: 14 RRVRNTCILAHVDHGKTSLADHLIA 38
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 43.6 bits (98), Expect = 2e-04
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Frame = +2
Query: 299 ITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVDFSSEVTAALRVTD 478
+T ++ IS+++E+ E L + +++ G LINLIDSP + S++V AL + D
Sbjct: 254 VTESNSLISLYYEMPEDSL----RSYKDKRAGNGHLINLIDSPVCCNLSNDVQPALCIMD 309
Query: 479 GALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLK-LKNYTRRSSVL* 655
GAL K L + K FL N+ K Y SS++
Sbjct: 310 GALVVVDSFEGVTLWTKTSIREALNMKIQPVFTLNKIDRFFLEQNVDGEKAYQTLSSLID 369
Query: 656 KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMGWA 775
+ ++ H + +V P+KG F SGL GWA
Sbjct: 370 SVNATMSSH--------KDAQVYPTKGT-VVFSSGLHGWA 400
Score = 41.1 bits (92), Expect = 0.001
Identities = 16/56 (28%), Positives = 33/56 (58%)
Frame = +1
Query: 523 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 690
T+T +R+A+ +I+P+ +NK+DR YQT ++++VN ++++ D
Sbjct: 325 TKTSIREALNMKIQPVFTLNKIDRFFLEQNVDGEKAYQTLSSLIDSVNATMSSHKD 380
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +3
Query: 117 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 221
+E+ +M K NIRN+ VIA HGK+ + DSLV+
Sbjct: 211 EELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVA 245
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 150 NIRNMSVIAHVDHGKSTLTDSLV 218
NIRN S+IAH+DHGKSTL D L+
Sbjct: 76 NIRNFSIIAHIDHGKSTLADKLL 98
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2
Query: 389 SEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
+++ + +NLID+PGHVDFS EV+ +L +GAL
Sbjct: 139 NDEPYCLNLIDTPGHVDFSYEVSRSLAACEGAL 171
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 41.9 bits (94), Expect = 6e-04
Identities = 14/25 (56%), Positives = 24/25 (96%)
Frame = +3
Query: 144 KRNIRNMSVIAHVDHGKSTLTDSLV 218
+R++RN++++AHVDHGK+TL DS++
Sbjct: 116 RRDVRNIAIVAHVDHGKTTLVDSML 140
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
KG IN+ID+PGH DF EV L + +G L
Sbjct: 180 KGTKINIIDTPGHSDFGGEVERVLNMVEGVL 210
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +3
Query: 129 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 218
G +D R IRN++VIAHVDHGK+TL D L+
Sbjct: 57 GALDPSR-IRNVAVIAHVDHGKTTLMDRLL 85
Score = 33.5 bits (73), Expect = 0.20
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 407 INLIDSPGHVDFSSEVTAALRVTDGAL 487
+N++D+PGH DF EV + + +GA+
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAV 151
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDR 594
QT+ VL +A+ ++PIL +NK+DR
Sbjct: 163 QTKFVLSKALKYGLRPILLLNKVDR 187
>02_04_0462 + 23131433-23132836
Length = 467
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 126 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 215
RG ++ + N+ I HVDHGK+TLT +L
Sbjct: 61 RGKFERTKPHVNIGTIGHVDHGKTTLTAAL 90
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 31.5 bits (68), Expect = 0.79
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 12/46 (26%)
Frame = -2
Query: 787 WRVKSPPHEXR--PETKPEP----------FARVDTHLTHGTHHHR 686
WR ++PPH + P P P F+ +H HG HHHR
Sbjct: 104 WRRRAPPHHQQQGPGASPSPPPPPPRGRPSFSASHSHHRHGGHHHR 149
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 125 PWDDGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWCESRK 256
PW GQ P + C R R P+G R C C K
Sbjct: 190 PWKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGCPIAK 233
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 162 MSVIAHVDHGKSTLTDSL 215
++++ HVDHGK++L DSL
Sbjct: 200 VTIMGHVDHGKTSLLDSL 217
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 258 PVSLTRVRTNKTVASPLNLRPSLCSSSLKRKI*YSSQTL 374
P+S R R N +P N PS S+ ++ YS Q++
Sbjct: 587 PLSAARSRNNPAAPAPTNAAPSSSSTLPSERLTYSGQSI 625
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSLV 218
N++++ HVD GKSTL+ L+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLL 268
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSLV 218
N++++ HVD GKSTL+ L+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLL 268
>12_01_0623 - 5131825-5131953,5133358-5133540,5133961-5134257
Length = 202
Score = 27.9 bits (59), Expect = 9.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 771 HPMXPDPKPNQSPLLGSTRTSPMGPTII 688
H P+P+QS L G+ R + +GP ++
Sbjct: 30 HHTPAGPRPDQSGLTGNNRETGLGPLVV 57
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
K + + L+DSPGH DF + + +D A+
Sbjct: 310 KNYHVVLLDSPGHKDFVPNMISGATQSDAAI 340
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 224 LGNQRVREG*LAVIDVGDHRHV-ADIPLLVHHPTDLVYREIHHFRWF 87
+GN+ +G A +D HRH+ A++PL PTD+ ++ F+WF
Sbjct: 585 IGNE---DGVAAAVD-SFHRHLPAELPL-APPPTDVKEEQLDFFQWF 626
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,048,078
Number of Sequences: 37544
Number of extensions: 429621
Number of successful extensions: 1295
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -