Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0210
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 140 8e-34
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 138 6e-33
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 56 4e-08
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 56 4e-08
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 47 1e-05
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 47 1e-05
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 43 3e-04
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 31 1.2
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 31 1.2
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 31 1.2
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 30 1.7
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 30 1.7
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.7
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 30 1.7
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 30 1.7
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 30 1.7
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 30 1.7
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 29 2.9
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 3.8
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 3.8
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 29 5.0
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 140 bits (340), Expect = 8e-34
Identities = 88/183 (48%), Positives = 105/183 (57%), Gaps = 8/183 (4%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXE------KSEK--GFLI 409
+TRFTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLI
Sbjct: 53 ETRFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLI 112
Query: 410 NLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKW 589
NLIDSPGHVDFSSEVTAALRVTDGAL + + + + K
Sbjct: 113 NLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKM 172
Query: 590 TVLFLSSNLKLKNYTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMG 769
L L + + + + + + GPMG + VDPS G GFGSGL G
Sbjct: 173 DRALLELQLGAEELFQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGN-VGFGSGLHG 231
Query: 770 WAF 778
WAF
Sbjct: 232 WAF 234
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/63 (69%), Positives = 47/63 (74%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGG 699
QTETVLRQAIAERIKP+LFMNKMDR +QTFQRIVEN+NVIIATY DD G
Sbjct: 150 QTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDDG 209
Query: 700 SHG 708
G
Sbjct: 210 PMG 212
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSK
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSK 42
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 138 bits (333), Expect = 6e-33
Identities = 87/183 (47%), Positives = 104/183 (56%), Gaps = 8/183 (4%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXE------KSEK--GFLI 409
+TRFTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+ +Q E K EK GFLI
Sbjct: 53 ETRFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLI 112
Query: 410 NLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKW 589
NLIDSPGHVDFSSEVTAAL VTDGAL + + + + K
Sbjct: 113 NLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSGVCVQTETVLRQAIAERIKPVLFMNKM 172
Query: 590 TVLFLSSNLKLKNYTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMG 769
L L + + + + + + GPMG + VDPS G GFGSGL G
Sbjct: 173 DRALLELQLGAEELFQTFQRIVENINVIIATYGDDDGPMGPIMVDPSIGN-VGFGSGLHG 231
Query: 770 WAF 778
WAF
Sbjct: 232 WAF 234
Score = 90.2 bits (214), Expect = 1e-18
Identities = 44/63 (69%), Positives = 47/63 (74%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGG 699
QTETVLRQAIAERIKP+LFMNKMDR +QTFQRIVEN+NVIIATY DD G
Sbjct: 150 QTETVLRQAIAERIKPVLFMNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDDG 209
Query: 700 SHG 708
G
Sbjct: 210 PMG 212
Score = 84.2 bits (199), Expect = 1e-16
Identities = 39/42 (92%), Positives = 41/42 (97%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
MVNFTVDEIR +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSK
Sbjct: 1 MVNFTVDEIRALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSK 42
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 55.6 bits (128), Expect = 4e-08
Identities = 37/78 (47%), Positives = 46/78 (58%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGH 433
K R+ D+R+DEQ R IT+KS+ IS+ E LINLIDSPGH
Sbjct: 54 KLRYMDSREDEQTRGITMKSSGISLLCE--------------------PLLINLIDSPGH 93
Query: 434 VDFSSEVTAALRVTDGAL 487
VDFS EVT+AL ++D AL
Sbjct: 94 VDFSGEVTSALILSDIAL 111
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +3
Query: 150 NIRNMSVIAHVDHGKSTLTDSLVS 221
+IRN+ ++AHVDHGK++ DSLVS
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVS 42
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 678
QTE ++RQ I IL +NK+DR YQ R++E VN I+
Sbjct: 123 QTEALIRQVIRNGQAMILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCIS 175
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 55.6 bits (128), Expect = 4e-08
Identities = 37/78 (47%), Positives = 46/78 (58%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGH 433
K R+ D+R+DEQ R IT+KS+ IS+ E LINLIDSPGH
Sbjct: 54 KLRYMDSREDEQTRGITMKSSGISLLCE--------------------PLLINLIDSPGH 93
Query: 434 VDFSSEVTAALRVTDGAL 487
VDFS EVT+AL ++D AL
Sbjct: 94 VDFSGEVTSALILSDIAL 111
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +3
Query: 150 NIRNMSVIAHVDHGKSTLTDSLVS 221
+IRN+ ++AHVDHGK++ DSLVS
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVS 42
Score = 35.9 bits (79), Expect = 0.033
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIA 678
QTE ++RQ I IL +NK+DR YQ R++E VN I+
Sbjct: 123 QTEALIRQVIRNGQAMILVINKIDRLRVELKMSSSEAYQHMSRLIEGVNSCIS 175
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
+G+L+NLID+PGHVDFS+EV+ +L V DG L
Sbjct: 100 RGYLLNLIDTPGHVDFSAEVSRSLAVCDGIL 130
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +3
Query: 153 IRNMSVIAHVDHGKSTLTDSLV 218
IRN ++AHVDHGKSTL D L+
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLL 63
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +2
Query: 245 ESRKTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDS 424
E RFTD E+ R +IKS +S+ + + K +L+N+ID+
Sbjct: 164 EDADARFTDILFIEKQRGCSIKSQPVSIVAQ---------------DSRSKSYLLNIIDT 208
Query: 425 PGHVDFSSEVTAALRVTDGAL 487
PGHV+FS E+TA+ R+ DG +
Sbjct: 209 PGHVNFSDEMTASYRLADGVV 229
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 523 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 693
TE +R AI ER+ L ++K+DR Y + I++ VN I++T+ ++
Sbjct: 242 TERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEE 298
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 132 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
+MD +RN+++ H+ HGK+T D L+ +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 155
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/81 (34%), Positives = 43/81 (53%)
Frame = +2
Query: 245 ESRKTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDS 424
E RFTD E+ R +IKS +S+ + + K +L+N+ID+
Sbjct: 39 EDADARFTDILFIEKQRGCSIKSQPVSIVAQ---------------DSRSKSYLLNIIDT 83
Query: 425 PGHVDFSSEVTAALRVTDGAL 487
PGHV+FS E+TA+ R+ DG +
Sbjct: 84 PGHVNFSDEMTASYRLADGVV 104
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +1
Query: 523 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 693
TE +R AI ER+ L ++K+DR Y + I++ VN I++T+ ++
Sbjct: 117 TERAIRHAIQERLAVTLCISKIDRLLLELKLPPADAYFKLRLIIDQVNNILSTFAEE 173
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
MD +RN+++ H+ HGK+T D L+ +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 30
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +2
Query: 398 GFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
G IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 111 GTNINIIDTPGHVDFTVEVERALRVLDGAV 140
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 153 IRNMSVIAHVDHGKSTLTDSLV 218
IRN+ + AH+D GK+T+T+ ++
Sbjct: 44 IRNIGISAHIDSGKTTVTERIL 65
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +2
Query: 308 KSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 481
K ++ F ++E + + + + KG INLID+PGHVDF EV +RV DG
Sbjct: 60 KGNTVTDFLDIERERGITVQSA-AVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDG 116
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 153 IRNMSVIAHVDHGKSTLTDSLV 218
+RN+ VIAHVD GK+T+T+ L+
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLL 46
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I HVDHGK+TLT ++
Sbjct: 51 NVGTIGHVDHGKTTLTSAI 69
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I HVDHGK+TLT ++
Sbjct: 52 NVGTIGHVDHGKTTLTSAI 70
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I HVDHGK+TLT ++
Sbjct: 52 NVGTIGHVDHGKTTLTSAI 70
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 29.5 bits (63), Expect = 2.9
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 138 DKKRNIRNMSVIAHVDHGKSTLTDSL 215
D +R ++++ HVDHGK+TL D++
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM 176
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 186 DRRGRSQTCCGYSASCPSSHG 124
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 186 DRRGRSQTCCGYSASCPSSHG 124
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 101 GEFHGRRDPWDDGQEAEYPQHVCDR 175
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 101 GEFHGRRDPWDDGQEAEYPQHVCDR 175
GEFHG WD+ ++EY + DR
Sbjct: 666 GEFHGTTKSWDNITKSEYGTFLLDR 690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,560,929
Number of Sequences: 27780
Number of extensions: 357289
Number of successful extensions: 982
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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