Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0210
(791 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 95 5e-20
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 59 3e-09
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 59 3e-09
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 58 9e-09
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 3e-07
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 51 8e-07
At5g13650.2 68418.m01585 elongation factor family protein contai... 47 1e-05
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 46 3e-05
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 46 3e-05
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 46 4e-05
At5g13650.1 68418.m01584 elongation factor family protein contai... 45 5e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 44 2e-04
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 41 0.001
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 30 1.5
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 30 1.5
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 30 1.5
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 30 1.5
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 2.0
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 2.0
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 3.5
At2g31060.1 68415.m03790 elongation factor family protein contai... 29 3.5
At1g55390.1 68414.m06335 DC1 domain-containing protein similar t... 29 3.5
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 28 6.2
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 28 6.2
At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family... 28 8.2
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 95.1 bits (226), Expect = 5e-20
Identities = 67/174 (38%), Positives = 89/174 (51%), Gaps = 1/174 (0%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R TDTR DE +R ITIKST IS+++E+ ++ L T + +LINLIDSPGHVD
Sbjct: 55 RMTDTRADEAERGITIKSTGISLYYEMTDESLKSFTGARDGNE----YLINLIDSPGHVD 110
Query: 440 FSSEVTAALRVTDGALXXXXXXXXXXYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLK 619
FSSEVTAALR+TDGAL + + + L + K FL +
Sbjct: 111 FSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVD 170
Query: 620 LKN-YTRRSSVL*KMLTSL*PHITMMVGPMGEVRVDPSKGLWFGFGSGLMGWAF 778
+ Y S V+ + T +G+V+V P KG F +GL GWAF
Sbjct: 171 GEEAYQTFSRVIENANVIM---ATYEDPLLGDVQVYPEKGT-VAFSAGLHGWAF 220
Score = 72.5 bits (170), Expect = 3e-13
Identities = 33/57 (57%), Positives = 40/57 (70%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYND 690
QTETVLRQA+ ERI+P+L +NKMDR YQTF R++EN NVI+ATY D
Sbjct: 138 QTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRVIENANVIMATYED 194
Score = 71.3 bits (167), Expect = 7e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +3
Query: 99 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 221
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVA 41
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
++TDTR DEQ+R I+IK+ +S+ E + K +L N++D+PGHV+
Sbjct: 177 KYTDTRVDEQERNISIKAVPMSLVLE---------------DSRSKSYLCNIMDTPGHVN 221
Query: 440 FSSEVTAALRVTDGAL 487
FS E+TA+LR+ DGA+
Sbjct: 222 FSDEMTASLRLADGAV 237
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 129 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 161
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 523 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGG 699
TE +R AI + + ++ +NK+DR Y + +E +N I+ + G
Sbjct: 250 TERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAG 308
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
++TDTR DEQ+R I+IK+ +S+ E + K +L N++D+PGHV+
Sbjct: 177 KYTDTRVDEQERNISIKAVPMSLVLE---------------DSRSKSYLCNIMDTPGHVN 221
Query: 440 FSSEVTAALRVTDGAL 487
FS E+TA+LR+ DGA+
Sbjct: 222 FSDEMTASLRLADGAV 237
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 129 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 161
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 523 TETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDDGG 699
TE +R AI + + ++ +NK+DR Y + +E +N I+ + G
Sbjct: 250 TERAIRHAIQDHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVINNHISAASTTAG 308
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 57.6 bits (133), Expect = 9e-09
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +2
Query: 260 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVD 439
R+TDTR DEQ+R I+IK+ +S+ E + K +L N++D+PG+V+
Sbjct: 163 RYTDTRVDEQERNISIKAVPMSLVLE---------------DSRSKSYLCNIMDTPGNVN 207
Query: 440 FSSEVTAALRVTDGAL 487
FS E+TA+LR+ DGA+
Sbjct: 208 FSDEMTASLRLADGAV 223
Score = 32.3 bits (70), Expect = 0.38
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 129 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 147
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 52.4 bits (120), Expect = 3e-07
Identities = 33/78 (42%), Positives = 45/78 (57%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGH 433
K RF D +EQ R IT+KS++IS+ + K + +NLIDSPGH
Sbjct: 45 KLRFMDYLDEEQRRAITMKSSSISLKY--------------------KDYSLNLIDSPGH 84
Query: 434 VDFSSEVTAALRVTDGAL 487
+DF SEV+ A R++DGAL
Sbjct: 85 MDFCSEVSTAARLSDGAL 102
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/58 (37%), Positives = 29/58 (50%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYQTFQRIVENVNVIIATYNDD 693
QT VLRQA E++ P L +NK+DR Y RIV VN I++ Y +
Sbjct: 114 QTHAVLRQAWIEKLTPCLVLNKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAYKSE 171
Score = 39.5 bits (88), Expect = 0.003
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +3
Query: 147 RNIRNMSVIAHVDHGKSTLTDSLVS 221
R +RN+ ++AHVDHGK+TL D L++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIA 31
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 51.2 bits (117), Expect = 8e-07
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +2
Query: 278 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVDFSSEVT 457
K +++R IT+K+ +MF+E + +D + G+L+NLID+PGHVDFS EV+
Sbjct: 105 KLQRERGITVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVS 153
Query: 458 AALRVTDGAL 487
+L GAL
Sbjct: 154 RSLSACQGAL 163
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 153 IRNMSVIAHVDHGKSTLTDSLV 218
IRN S+IAH+DHGKSTL D L+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLM 87
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/43 (41%), Positives = 32/43 (74%)
Frame = +3
Query: 90 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 218
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSML 104
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
K +N+ID+PGH DF EV L + DG L
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVL 174
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
K + +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAI 161
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLV 218
MDK +RN+ + AH+D GK+TLT+ ++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVL 86
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/31 (61%), Positives = 25/31 (80%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
K + +N+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAI 161
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLV 218
MDK +RN+ + AH+D GK+TLT+ ++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVL 86
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 45.6 bits (103), Expect = 4e-05
Identities = 26/60 (43%), Positives = 37/60 (61%)
Frame = +2
Query: 308 KSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
+ TA + E E++ + IT+ +K IN+ID+PGHVDF+ EV ALRV DGA+
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Score = 29.1 bits (62), Expect = 3.5
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +3
Query: 147 RNIRNMSVIAHVDHGKSTLTDSLV 218
++ RN+ ++AH+D GK+T T+ ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERIL 117
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDR 594
Q+ETV RQA + I F+NKMDR
Sbjct: 201 QSETVWRQADKYGVPRICFVNKMDR 225
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 45.2 bits (102), Expect = 5e-05
Identities = 15/28 (53%), Positives = 26/28 (92%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLV 218
+D++ N+RN++++AHVDHGK+TL DS++
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSML 103
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 395 KGFLINLIDSPGHVDFSSEVTAALRVTDGAL 487
K +N+ID+PGH DF EV L + DG L
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVL 173
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/78 (38%), Positives = 40/78 (51%)
Frame = +2
Query: 254 KTRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQXEKSEKGFLINLIDSPGH 433
K +F D E++R ITIK A M + E+ F +NLID+PGH
Sbjct: 119 KEQFLDNMDLERERGITIKLQAARMRYVYEDTP----------------FCLNLIDTPGH 162
Query: 434 VDFSSEVTAALRVTDGAL 487
VDFS EV+ +L +GAL
Sbjct: 163 VDFSYEVSRSLAACEGAL 180
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +3
Query: 150 NIRNMSVIAHVDHGKSTLTDSLV 218
NIRN S+IAH+DHGKSTL D L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLL 107
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +3
Query: 105 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 215
+FTV RG ++K+ N+ I HVDHGK+TLT +L
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAAL 99
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3
Query: 135 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 224
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 172 SPTSITASQPSRTRWFPRPVSLLVRE 249
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSL 215
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +1
Query: 172 SPTSITASQPSRTRWFPRPVSLLVRE 249
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 520 QTETVLRQAIAERIKPILFMNKMDR 594
QT+ VL +A+ ++PIL +NK+DR
Sbjct: 18 QTKFVLAKALKYGLRPILLLNKVDR 42
>At1g55390.1 68414.m06335 DC1 domain-containing protein similar to
hypothetical protein GI:4204272 from [Arabidopsis
thaliana] contains weak PHD zinc finger motifs contains
weak PHD zinc finger motifs DC1 domain, a divergent
protein kinase C domain of unknown function.
Length = 684
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -2
Query: 757 RPETKPEPFARVDTH-LTHGTHHHRYMWL 674
+P+ EPF R+D + H +HH YM L
Sbjct: 366 KPDEDIEPFVRIDEETIQHFSHHEHYMKL 394
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +3
Query: 159 NMSVIAHVDHGKSTLTDSLV 218
N++++ HVD GKSTL+ L+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLL 260
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 162 MSVIAHVDHGKSTLTDSL 215
++V+ HVDHGK++L D+L
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At4g37130.1 68417.m05258 hydroxyproline-rich glycoprotein family
protein
Length = 513
Score = 27.9 bits (59), Expect = 8.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -3
Query: 759 PDPKPNQSPLLGSTRTSPMGPT 694
P P P Q+PL GS+ S G T
Sbjct: 448 PSPTPTQTPLFGSSPASTFGST 469
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,756,873
Number of Sequences: 28952
Number of extensions: 339472
Number of successful extensions: 1062
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1785055200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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