Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0209
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045646-15|AAK29838.1|  284|Caenorhabditis elegans Enoyl-coa hy...    72   3e-13
Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical pr...    45   5e-05
Z93377-2|CAB07575.2|  326|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AL132876-4|CAC48118.1|  256|Caenorhabditis elegans Hypothetical ...    27   9.7  

>AF045646-15|AAK29838.1|  284|Caenorhabditis elegans Enoyl-coa
           hydratase protein 5 protein.
          Length = 284

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 38/78 (48%), Positives = 52/78 (66%)
 Frame = +3

Query: 3   ELIFTSRIVSGKEAKALGIVNHVVAQDTANKAAFEKALSIAREIIPNAPIALRCAKQAIS 182
           ELI+T+ +++G +A  LG+VNHVV    AN    EK+L IAR+IIP  PIA++ AK AI+
Sbjct: 188 ELIYTAEVLNGADAAKLGVVNHVVE---ANP--IEKSLEIARKIIPRGPIAVKLAKLAIN 242

Query: 183 EGIQLSIKDGYEIEQKCY 236
            G Q  I     +EQ+CY
Sbjct: 243 LGSQTDITSALSVEQQCY 260


>Z27079-6|CAA81594.1|  288|Caenorhabditis elegans Hypothetical
           protein T05G5.6 protein.
          Length = 288

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 24/89 (26%), Positives = 49/89 (55%)
 Frame = +3

Query: 3   ELIFTSRIVSGKEAKALGIVNHVVAQDTANKAAFEKALSIAREIIPNAPIALRCAKQAIS 182
           E+  T   V+ +EAK  GIV+ +   D        +A+ +  +I   +P+ ++ AK+A++
Sbjct: 188 EVCLTGNHVTAQEAKEHGIVSKIFPAD----QVVGEAVKLGEKIADQSPLIVQMAKEAVN 243

Query: 183 EGIQLSIKDGYEIEQKCYEINIPTKTDRK 269
           +  +L++++G   E++ +     TK DRK
Sbjct: 244 KAYELTLQEGLHFERRLFHATFATK-DRK 271



 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/18 (66%), Positives = 15/18 (83%)
 Frame = +2

Query: 257 DRQEGMISFMEKRKPVYE 310
           DR+EGM +F EKRKP +E
Sbjct: 269 DRKEGMTAFAEKRKPQWE 286


>Z93377-2|CAB07575.2|  326|Caenorhabditis elegans Hypothetical
           protein F13A7.3 protein.
          Length = 326

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -1

Query: 281 MKSCLPVCLSWNIYFVAFLFYLITILDTQLYAFTDSLFCTTEG 153
           +  C P+ + +  + VAFL YL  +L T +Y F + +   T G
Sbjct: 125 LNQCPPLLIGFTHWLVAFLIYLPALLHTDIY-FENEVTLLTVG 166


>U23180-3|AAC46729.2|  856|Caenorhabditis elegans Hypothetical
           protein C28F5.4 protein.
          Length = 856

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
 Frame = +3

Query: 30  SGKEAKALGIVNHVVAQDTANKAAFEKALSIAREIIPNAPIA-LRCAKQAISEGIQLSIK 206
           S K+     +   +VA+ + N  AF+   +I  E   NA +A L C  ++ S G+Q+ + 
Sbjct: 471 SPKQGIMFALTTPLVAKKSKNVVAFKSLDTIIEETY-NARLAGLECQFESSSSGVQIRV- 528

Query: 207 DGYEIEQKCYEINIPTKTDRKA*FHLWKKENLFMRDIS*HFFKRNLS 347
            GY+ +Q  +  ++    +R A F +    N    DIS    KR L+
Sbjct: 529 FGYDEKQSLFAKHL---VNRMANFQV----NRLCFDISFESLKRTLT 568


>AL132876-4|CAC48118.1|  256|Caenorhabditis elegans Hypothetical
           protein Y105E8A.4 protein.
          Length = 256

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +2

Query: 227 EMLRNKYSN*DRQEGMISFMEKRKP 301
           ++ ++ ++  DR+EGM +F EKR P
Sbjct: 227 QLFQSTFATNDRREGMSAFAEKRAP 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,838,137
Number of Sequences: 27780
Number of extensions: 276518
Number of successful extensions: 659
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)