Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0208
(812 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q12874 Cluster: Splicing factor 3A subunit 3; n=31; Bil... 144 2e-33
UniRef50_A7T279 Cluster: Predicted protein; n=1; Nematostella ve... 126 7e-28
UniRef50_Q6TUF1 Cluster: LRRGT00093; n=3; Eutheria|Rep: LRRGT000... 112 9e-24
UniRef50_Q22469 Cluster: Putative uncharacterized protein; n=5; ... 94 3e-18
UniRef50_Q16EE4 Cluster: Splicing factor 3a; n=2; Culicidae|Rep:... 78 3e-13
UniRef50_A4QU30 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_Q9FG01 Cluster: Splicing factor 3a; n=6; Magnoliophyta|... 58 2e-07
UniRef50_Q9GUX4 Cluster: Putative splicesome associated protein ... 52 1e-05
UniRef50_O59706 Cluster: U2 snRNP-associated protein sap61; n=1;... 50 7e-05
UniRef50_Q7R8D2 Cluster: Splicing factor 3a subunit 3; n=1; Plas... 49 2e-04
UniRef50_Q5KJJ3 Cluster: RNA splicing factor PRP9, putative; n=1... 48 3e-04
UniRef50_UPI0000498796 Cluster: zinc finger protein; n=1; Entamo... 46 0.001
UniRef50_Q55CK7 Cluster: C2H2 type Zn finger-containing protein;... 46 0.001
UniRef50_Q4P183 Cluster: Putative uncharacterized protein; n=1; ... 40 0.056
UniRef50_Q9VB72 Cluster: CG5882-PA; n=2; Sophophora|Rep: CG5882-... 37 0.53
UniRef50_A7AIA9 Cluster: Putative uncharacterized protein; n=1; ... 36 0.92
UniRef50_A4M9W3 Cluster: ATP synthase delta chain; n=1; Petrotog... 36 0.92
UniRef50_Q6C3R4 Cluster: Similar to DEHA0G11792g Debaryomyces ha... 36 0.92
UniRef50_UPI00006CFDC8 Cluster: splicesome-associated protein, p... 36 1.2
UniRef50_Q582P0 Cluster: Kinesin, putative; n=1; Trypanosoma bru... 35 2.1
UniRef50_Q2UU66 Cluster: Predicted protein; n=1; Aspergillus ory... 35 2.1
UniRef50_Q5JHN1 Cluster: DNA double-strand break repair rad50 AT... 35 2.1
UniRef50_A5K6W2 Cluster: Splicesome-associated protein, putative... 35 2.8
UniRef50_UPI0000D5799C Cluster: PREDICTED: similar to dynein, cy... 34 3.7
UniRef50_Q24I25 Cluster: Protein kinase domain containing protei... 34 3.7
UniRef50_Q6FA68 Cluster: Putative tellurique resistant protein; ... 34 4.9
UniRef50_A3DGE1 Cluster: ABC transporter related protein; n=2; C... 34 4.9
UniRef50_UPI0000DA32F1 Cluster: PREDICTED: similar to ciliary ro... 33 8.6
UniRef50_A7SF38 Cluster: Predicted protein; n=1; Nematostella ve... 33 8.6
UniRef50_Q6BPR8 Cluster: Similar to sp|P19736 Saccharomyces cere... 33 8.6
UniRef50_Q2FTB0 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_Q12874 Cluster: Splicing factor 3A subunit 3; n=31;
Bilateria|Rep: Splicing factor 3A subunit 3 - Homo
sapiens (Human)
Length = 501
Score = 144 bits (350), Expect = 2e-33
Identities = 68/126 (53%), Positives = 89/126 (70%)
Frame = +3
Query: 252 KYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 431
+YHEE+ER MD M KE+L KK+ R+ IN+DHR + + DRY+E S L++LY+DKDGLRK
Sbjct: 10 RYHEEKERLMDVMAKEMLTKKSTLRDQINSDHRTRAMQDRYMEVSGNLRDLYDDKDGLRK 69
Query: 432 EEISALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVE 611
EE++A+SGP+EF EFY+RLKQIKEF + P + RENP+E+ VE
Sbjct: 70 EELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSEEAQNLVE 129
Query: 612 FTDEEG 629
FTDEEG
Sbjct: 130 FTDEEG 135
Score = 85.4 bits (202), Expect = 2e-15
Identities = 44/74 (59%), Positives = 49/74 (66%)
Frame = +2
Query: 509 RKHPNEISVPMSVEFEELGKSKGKSC*GLHSSCRVH**RRAMGKYLDLHSCYEKYINLKX 688
RKHPNEI VPMSVEFEEL K++ + G+YLDLH CY KYINLK
Sbjct: 96 RKHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTD-EEGYGRYLDLHDCYLKYINLKA 154
Query: 689 IEKVDYITYLSIFD 730
EK+DYITYLSIFD
Sbjct: 155 SEKLDYITYLSIFD 168
>UniRef50_A7T279 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 365
Score = 126 bits (304), Expect = 7e-28
Identities = 64/126 (50%), Positives = 80/126 (63%)
Frame = +3
Query: 252 KYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 431
+ HEERER DAM +EILHK + INADHR +NL +R + A+ + LYED+DGLRK
Sbjct: 10 RLHEERERLEDAMSQEILHKISRKATQINADHRTRNLLERSVIAAESMANLYEDQDGLRK 69
Query: 432 EEISALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVE 611
EE+S+LSGP+EF EFYSRL+ +KE+ + P REN ED VE
Sbjct: 70 EEVSSLSGPNEFAEFYSRLRSLKEYHRKYPNEVTEPMQMEFLRMKENRENNIEDNLPLVE 129
Query: 612 FTDEEG 629
FTDEEG
Sbjct: 130 FTDEEG 135
Score = 66.9 bits (156), Expect = 6e-10
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +2
Query: 509 RKHPNEISVPMSVEFEELGKSKGKSC*GLHSSCRVH**RRAMGKYLDLHSCYEKYINLKX 688
RK+PNE++ PM +EF + +++ + GKYLDLH Y+KY+NLK
Sbjct: 96 RKYPNEVTEPMQMEFLRMKENRENNIEDNLPLVEFTD-EEGYGKYLDLHEVYDKYLNLKG 154
Query: 689 IEKVDYITYLSIFD 730
IEK+DY+TYL FD
Sbjct: 155 IEKIDYLTYLDTFD 168
>UniRef50_Q6TUF1 Cluster: LRRGT00093; n=3; Eutheria|Rep: LRRGT00093
- Rattus norvegicus (Rat)
Length = 230
Score = 112 bits (270), Expect = 9e-24
Identities = 61/126 (48%), Positives = 78/126 (61%)
Frame = +3
Query: 252 KYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 431
+YHEE+ER MD M KE+L KK+ RY+E S L++LY+DKDGLRK
Sbjct: 10 RYHEEKERLMDVMAKEMLTKKS----------------TRYMEVSGNLRDLYDDKDGLRK 53
Query: 432 EEISALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVE 611
EE++A+SGP+EF EFY+RLKQIKEF + P + RENP+E+ VE
Sbjct: 54 EELNAISGPNEFAEFYNRLKQIKEFHRKHPNEICVPMSVEFEELLKARENPSEEAQNLVE 113
Query: 612 FTDEEG 629
FTDEEG
Sbjct: 114 FTDEEG 119
Score = 62.1 bits (144), Expect = 2e-08
Identities = 36/73 (49%), Positives = 42/73 (57%)
Frame = +2
Query: 509 RKHPNEISVPMSVEFEELGKSKGKSC*GLHSSCRVH**RRAMGKYLDLHSCYEKYINLKX 688
RKHPNEI VPMSVEFEEL K++ + G+YLDLH CY KYINLK
Sbjct: 80 RKHPNEICVPMSVEFEELLKARENPSEEAQNLVEFTD-EEGYGRYLDLHDCYLKYINLKA 138
Query: 689 IEKVDYITYLSIF 727
E I +L+ F
Sbjct: 139 SESFPGI-FLACF 150
>UniRef50_Q22469 Cluster: Putative uncharacterized protein; n=5;
Bilateria|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 500
Score = 94.3 bits (224), Expect = 3e-18
Identities = 48/123 (39%), Positives = 69/123 (56%)
Frame = +3
Query: 258 HEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEE 437
HEERER +D VKE + +K H+ +N++ R+K DRY S L + Y+D+DG + E
Sbjct: 12 HEERERLIDITVKEKIAEKLTHKAKVNSEQRVKTFVDRYYSVSAELAKFYKDEDGSKSME 71
Query: 438 ISALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVEFT 617
+ ++SGP+EF EFYSRLK IK+ + P + + NP VEF+
Sbjct: 72 MDSVSGPNEFAEFYSRLKVIKDAHRRNPDELAEPLTVEFQKINEEIINPERAEPDMVEFS 131
Query: 618 DEE 626
DEE
Sbjct: 132 DEE 134
Score = 54.8 bits (126), Expect = 2e-06
Identities = 27/74 (36%), Positives = 47/74 (63%)
Frame = +2
Query: 509 RKHPNEISVPMSVEFEELGKSKGKSC*GLHSSCRVH**RRAMGKYLDLHSCYEKYINLKX 688
R++P+E++ P++VEF+++ + A G++LDLH+ Y+K+INLK
Sbjct: 96 RRNPDELAEPLTVEFQKINEEIINPERAEPDMVEFSD-EEAYGRFLDLHAQYDKFINLKN 154
Query: 689 IEKVDYITYLSIFD 730
I++VDY+TYL F+
Sbjct: 155 IKRVDYMTYLLNFE 168
>UniRef50_Q16EE4 Cluster: Splicing factor 3a; n=2; Culicidae|Rep:
Splicing factor 3a - Aedes aegypti (Yellowfever
mosquito)
Length = 484
Score = 77.8 bits (183), Expect = 3e-13
Identities = 47/125 (37%), Positives = 69/125 (55%)
Frame = +3
Query: 252 KYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRK 431
+ HEE +R + AM +E+ K ++ + ADHR+K +RY S L ELY+DKDG RK
Sbjct: 10 RLHEECDRLVMAMSEELQTPKKTTKDKVLADHRIKIYLERYQSCSKSLLELYQDKDGERK 69
Query: 432 EEISALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVE 611
+EI+ +S +EF+EFYS+ + EF +N P Q +PA V V+
Sbjct: 70 QEITNMS-VNEFKEFYSQFNSLVEFHQNHGNNVAIPASIEFSKLREQLNDPAYLAEV-VK 127
Query: 612 FTDEE 626
F+D E
Sbjct: 128 FSDVE 132
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +2
Query: 509 RKHPNEISVPMSVEFEELGKSKGKSC*GLHSSCRVH**RRAMGKYLDLHSCYEKYINLKX 688
+ H N +++P S+EF +L + L + G+YLDLH C++ Y+NLK
Sbjct: 95 QNHGNNVAIPASIEFSKLREQLNDPA-YLAEVVKFSDVEN-YGQYLDLHECFDNYVNLKG 152
Query: 689 IEKVDYITYLSIFD 730
++K+DYITYLS F+
Sbjct: 153 VDKIDYITYLSEFN 166
>UniRef50_A4QU30 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 521
Score = 60.1 bits (139), Expect = 7e-08
Identities = 35/122 (28%), Positives = 59/122 (48%)
Frame = +3
Query: 261 EERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEI 440
E+ ER + + H+ T R+ +N DH + L ++ + S L +YED +GLR +EI
Sbjct: 11 EDLERLEQGITDRMSHEPTFIRDRLNRDHEVAQLLEQIQKQSSELISMYEDVNGLRSKEI 70
Query: 441 SALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVEFTD 620
A+ F EFY ++++IKE + + +PA+ Y V + F+
Sbjct: 71 QAIGSGDPFDEFYKQVEEIKEHHAKYPTEQAENPELRYRP-GRDGPDPAQPYMVDMIFSG 129
Query: 621 EE 626
EE
Sbjct: 130 EE 131
Score = 38.3 bits (85), Expect = 0.23
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +2
Query: 629 AMGKYLDLHSCYEKYINLKXIEKVDYITYLSIFD 730
A GK+ DL + +E YINL ++ Y+ YL +FD
Sbjct: 132 AFGKFFDLLAAHEAYINLPNVKHRSYLQYLEVFD 165
>UniRef50_Q9FG01 Cluster: Splicing factor 3a; n=6;
Magnoliophyta|Rep: Splicing factor 3a - Arabidopsis
thaliana (Mouse-ear cress)
Length = 504
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/90 (33%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Frame = +3
Query: 258 HEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEE 437
HEE ER +V+++ + ++ + HR++++ + + + +L E YEDKDG +E
Sbjct: 13 HEEVERLERLVVEDLQKEPPSSKDRLVQGHRVRHMIESIMLTTEKLVETYEDKDGAWDDE 72
Query: 438 ISAL-----SGPHEFQEFYSRLKQIKEFQE 512
I+AL +G + F EFY RLK+I+E+ +
Sbjct: 73 IAALGGQTATGTNVFSEFYDRLKEIREYHK 102
Score = 43.2 bits (97), Expect = 0.008
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 635 GKYLDLHSCYEKYINLKXIEKVDYITYLSIF 727
G+YLDLH Y +YIN K E+V+Y YL +F
Sbjct: 135 GRYLDLHDMYNQYINSKFGERVEYSAYLDVF 165
>UniRef50_Q9GUX4 Cluster: Putative splicesome associated protein
CnSAP1; n=1; Hydra magnipapillata|Rep: Putative
splicesome associated protein CnSAP1 - Hydra
magnipapillata (Hydra)
Length = 125
Score = 52.4 bits (120), Expect = 1e-05
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +2
Query: 635 GKYLDLHSCYEKYINLKXIEKVDYITYLSIFD 730
GKYLDLH Y ++INLK IE +DY+TYL FD
Sbjct: 14 GKYLDLHEAYTQFINLKNIEHIDYLTYLMTFD 45
>UniRef50_O59706 Cluster: U2 snRNP-associated protein sap61; n=1;
Schizosaccharomyces pombe|Rep: U2 snRNP-associated
protein sap61 - Schizosaccharomyces pombe (Fission
yeast)
Length = 492
Score = 50.0 bits (114), Expect = 7e-05
Identities = 24/85 (28%), Positives = 44/85 (51%)
Frame = +3
Query: 258 HEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEE 437
HEE ER A+V + RE + +H+ +++ E S +L +E D L+ +E
Sbjct: 13 HEELERLQQAIVDRQVANPKAPRERLRLEHQSAQFLNQFRETSKKLLVSHESSDRLKDQE 72
Query: 438 ISALSGPHEFQEFYSRLKQIKEFQE 512
++ ++ + EFY L +I+EF +
Sbjct: 73 VARINADDDLTEFYKSLGEIQEFHK 97
Score = 41.1 bits (92), Expect = 0.032
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = +2
Query: 635 GKYLDLHSCYEKYINLKXIEKVDYITYL 718
G+++DL+ CYE+YINL ++ + Y+ YL
Sbjct: 134 GRFMDLNECYEEYINLSNVQHISYLEYL 161
>UniRef50_Q7R8D2 Cluster: Splicing factor 3a subunit 3; n=1;
Plasmodium yoelii yoelii|Rep: Splicing factor 3a subunit
3 - Plasmodium yoelii yoelii
Length = 585
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Frame = +3
Query: 258 HEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEE 437
HEE E A+ + I K +++ I D+ + L ++ S +L E+Y+D D L+KEE
Sbjct: 13 HEEIELIEKAIAELINDKVKNNKKHIFYDYCINYLVEKIQNKSKQLVEIYKDDDNLKKEE 72
Query: 438 ISALSGPHE-----FQEFYSRLKQIKEFQENIQMK 527
I +SG ++ +Y R+K IK++ + +K
Sbjct: 73 IQFISGKTNEENDVWKNYYERIKYIKDYHKKTNIK 107
>UniRef50_Q5KJJ3 Cluster: RNA splicing factor PRP9, putative; n=1;
Filobasidiella neoformans|Rep: RNA splicing factor PRP9,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 513
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 258 HEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEE 437
HE ER A+ + ++ T + + D + + R L E YED GLR E
Sbjct: 12 HESIERYEQALAEVLMQNPTATKNVVRRDRKAAEILGRIGTLRKELVEQYEDIPGLRPRE 71
Query: 438 ISALSGP----HEFQEFYSRLKQIKEF 506
++ LS P + EFY+R +IK+F
Sbjct: 72 LALLSAPAPGEDDLAEFYTRFNKIKDF 98
Score = 35.1 bits (77), Expect = 2.1
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 629 AMGKYLDLHSCYEKYINLKXIEKVDYITYLSI 724
A GK+LDL+ + +Y+NLK ++ Y+ YL +
Sbjct: 149 AYGKHLDLYLSHSQYLNLKGSTRLSYVAYLDM 180
>UniRef50_UPI0000498796 Cluster: zinc finger protein; n=1; Entamoeba
histolytica HM-1:IMSS|Rep: zinc finger protein -
Entamoeba histolytica HM-1:IMSS
Length = 460
Score = 46.0 bits (104), Expect = 0.001
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +3
Query: 243 RATKYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDG 422
R + HEE E D +V+ I ++ + I +H + L+ + + L LYEDK+G
Sbjct: 6 RTRQLHEEIELFEDEIVRRIKNQPVLQEDKIKNEHIIMKLNHEINQRTGELISLYEDKNG 65
Query: 423 LRKEEISALSGPHEFQE----FYSRLKQIK-EFQ 509
++EE+ +SG + FY ++QIK EF+
Sbjct: 66 KKEEELQMISGNGNTTDLLKIFYQGIEQIKNEFK 99
>UniRef50_Q55CK7 Cluster: C2H2 type Zn finger-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: C2H2 type Zn
finger-containing protein - Dictyostelium discoideum AX4
Length = 544
Score = 46.0 bits (104), Expect = 0.001
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +3
Query: 258 HEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEE 437
HE ER + E+ + +E + HR+ + + IE S L +Y D D RK+E
Sbjct: 13 HENFERYELLIENEMKTEPKTTKERVLQSHRVNHYLNSSIECSKSLINIYTDSDHSRKDE 72
Query: 438 ISALS--GPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVE 611
++++S G + FY +L++IK++ +P NLK +R N +T +
Sbjct: 73 LTSISGFGTDLYSSFYEKLREIKDYHRK------FP---NLK---EERNNEPLIFTPSIS 120
Query: 612 FTDEE 626
FT E
Sbjct: 121 FTGNE 125
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 4/35 (11%)
Frame = +2
Query: 635 GKYLDLHSCYEKYINLKXIE----KVDYITYLSIF 727
GK+LDL+ YEKYINL +DY+TYL+ +
Sbjct: 128 GKFLDLNENYEKYINLSFNRNKSINLDYLTYLTSY 162
>UniRef50_Q4P183 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 565
Score = 40.3 bits (90), Expect = 0.056
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +3
Query: 246 ATKYHEERERTMDAMVKEILHKKTG-----HRETINADHRLKNLHDRYIEASIRLKELYE 410
A + HEE ER A+V ++ + H++ + H +L DR L Y
Sbjct: 10 ARQTHEEAERYQQALVDLLVSSSSTSYGLTHKDKLKRAHEASDLLDRVTSRYQYLDRFYT 69
Query: 411 DKDGLRKEEISALSGPH---EFQEFYSRLKQIKEFQE 512
D+ R+ E+ +LS EFY RL +++E+ +
Sbjct: 70 DEHQERQRELESLSSARADDALGEFYERLARVREYHD 106
Score = 39.1 bits (87), Expect = 0.13
Identities = 13/32 (40%), Positives = 24/32 (75%)
Frame = +2
Query: 635 GKYLDLHSCYEKYINLKXIEKVDYITYLSIFD 730
G++LDL+ +E Y+NLK ++++ Y+ Y+ FD
Sbjct: 163 GRFLDLYLHHEAYLNLKGVKRISYLAYIDDFD 194
>UniRef50_Q9VB72 Cluster: CG5882-PA; n=2; Sophophora|Rep: CG5882-PA
- Drosophila melanogaster (Fruit fly)
Length = 866
Score = 37.1 bits (82), Expect = 0.53
Identities = 24/98 (24%), Positives = 43/98 (43%)
Frame = +3
Query: 234 NNFRATKYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYED 413
NN TK + R + A ++ H+E A H ++ L D +LK+L ED
Sbjct: 374 NNENLTKERDSLRRELQAEHHQLEQSNAQHQE---AQHEVRALKDTITTMDTKLKKLNED 430
Query: 414 KDGLRKEEISALSGPHEFQEFYSRLKQIKEFQENIQMK 527
+ L+KE+ L + + L+ +EN +++
Sbjct: 431 ANKLKKEKTKKLDEIQHWIDKLDALQNEMHLKENYEIE 468
>UniRef50_A7AIA9 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 637
Score = 36.3 bits (80), Expect = 0.92
Identities = 32/101 (31%), Positives = 48/101 (47%)
Frame = +3
Query: 225 KNGNNFRATKYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKEL 404
K N FR Y ++ M + E + K + I+A H+L+ LH ++ E KEL
Sbjct: 229 KINNQFR--DYDFKKNLEMKTALCETVEKLQTEPDVISAFHQLQKLHQQWREIGPVAKEL 286
Query: 405 YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFQENIQMK 527
ED K + ++ H QE + LK KE QEN++ K
Sbjct: 287 REDLWSRFKAASTIINKRH--QEHFEGLK-AKE-QENLEAK 323
>UniRef50_A4M9W3 Cluster: ATP synthase delta chain; n=1; Petrotoga
mobilis SJ95|Rep: ATP synthase delta chain - Petrotoga
mobilis SJ95
Length = 190
Score = 36.3 bits (80), Expect = 0.92
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 366 DRYIEASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFQENIQMKYL 533
D Y+EA RLK+ E + LR S L P + SR+K + EF + I +++L
Sbjct: 29 DEYVEAFQRLKKALESSESLRDMVYSPLIPP---KHIVSRMKDVSEFDDTIFVQFL 81
>UniRef50_Q6C3R4 Cluster: Similar to DEHA0G11792g Debaryomyces
hansenii IPF 4088.1; n=1; Yarrowia lipolytica|Rep:
Similar to DEHA0G11792g Debaryomyces hansenii IPF 4088.1
- Yarrowia lipolytica (Candida lipolytica)
Length = 655
Score = 36.3 bits (80), Expect = 0.92
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = -3
Query: 684 FKLMYFS*HECRSKYFPIALLHQ*TRQELCNPQQDFPFDL-PNSSNSTDMGTDISFG 517
F+ ++FS HECR + + Q R+ L +P +D P DL P++ M D ++G
Sbjct: 350 FQRLHFSYHECRKFEYEAREVLQKVRRHLLSPYEDVPGDLIPSAGGLAPMRKDETYG 406
>UniRef50_UPI00006CFDC8 Cluster: splicesome-associated protein,
putative; n=1; Tetrahymena thermophila SB210|Rep:
splicesome-associated protein, putative - Tetrahymena
thermophila SB210
Length = 521
Score = 35.9 bits (79), Expect = 1.2
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 11/109 (10%)
Frame = +3
Query: 228 NGNNFRATKYHEERERTMDAMVKEILHKKTGH-RETINADHRLKNLHDRYIEASIRLKEL 404
+ N T+ E +D V + + K + ++ + D++LKNL + + L
Sbjct: 2 SANWLEQTRSVLENIELLDQTVLDFMFDKLENPKDQVIIDNKLKNLIEMKQSKCMDALIL 61
Query: 405 YEDKDGLRKEEISALSG----------PHEFQEFYSRLKQIKEFQENIQ 521
+D DG++KEE++ L G P + F RLK IKE+ + Q
Sbjct: 62 LQDFDGVKKEEMAILEGKKSVSAGTRQPDIWYNFQQRLKDIKEYYKKHQ 110
>UniRef50_Q582P0 Cluster: Kinesin, putative; n=1; Trypanosoma
brucei|Rep: Kinesin, putative - Trypanosoma brucei
Length = 1594
Score = 35.1 bits (77), Expect = 2.1
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +3
Query: 219 TFKNGNNFRATKYHEERERTMDAMVKEILHKKTGHRETINADHRLKNL-HDRYIEASIRL 395
T G+NF + + R M+ + +EI + +RE L+N+ + EA +RL
Sbjct: 481 TSLGGSNFATDEERDRYRRKMEELEEEIERARARYRE---QGRELQNIRRESAAEAEVRL 537
Query: 396 KEL---YEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFQE 512
+ L + +K+ K + + H E SRLK+ K F E
Sbjct: 538 RALEAQFNEKENHLKRKGHEIQRKHRDAE--SRLKEFKNFSE 577
>UniRef50_Q2UU66 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 555
Score = 35.1 bits (77), Expect = 2.1
Identities = 26/98 (26%), Positives = 48/98 (48%)
Frame = +3
Query: 201 HKTISITFKNGNNFRATKYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIE 380
H+ I F++ +A + + + R + +KE+ HK E A+HR K ++ E
Sbjct: 291 HRYKLIQFEDAQR-KAREDEDVKARLREEKLKELRHKIEEEEEQRKAEHRYK--LRQFEE 347
Query: 381 ASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQ 494
A + +E + K LR+E++ L + +E RLK+
Sbjct: 348 AQRKAREDEDVKSKLREEKLKDLQRRIDEEEAQERLKE 385
>UniRef50_Q5JHN1 Cluster: DNA double-strand break repair rad50
ATPase; n=1; Thermococcus kodakarensis KOD1|Rep: DNA
double-strand break repair rad50 ATPase - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 883
Score = 35.1 bits (77), Expect = 2.1
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 204 KTISITFKNGNNFRATKYHEERERTMDAMVKEILHKKTGH--RETINADHRLKNLHDRYI 377
K I T K R K EE E++ D E L KT E + RLK+L +R
Sbjct: 635 KEIEKTSKRVEELR--KRVEELEKSYDKDRHEELKGKTRELSNELAGLEARLKSLEERRD 692
Query: 378 EASIRLKELYEDKDGLRKEEISALSGPHEFQEFYSRLKQIKEFQENI 518
E L++L E+K+ RKE+ L + +E RL++ + +N+
Sbjct: 693 EVKASLEKLREEKE-TRKEKAKELEKLKKARERVQRLREKVKAYKNL 738
>UniRef50_A5K6W2 Cluster: Splicesome-associated protein, putative;
n=8; Eukaryota|Rep: Splicesome-associated protein,
putative - Plasmodium vivax
Length = 631
Score = 34.7 bits (76), Expect = 2.8
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 261 EERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEI 440
E E+ + +++E + KK + I D+ + L ++ S L + Y D+DGL++EE+
Sbjct: 17 EMMEKAIADLIEEKVRKK--RKRGIRYDYSISYLVEKIQSKSRLLLQYYGDEDGLKREEM 74
Query: 441 SALSG 455
+SG
Sbjct: 75 QFISG 79
>UniRef50_UPI0000D5799C Cluster: PREDICTED: similar to dynein,
cytoplasmic, heavy polypeptide 2; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to dynein, cytoplasmic,
heavy polypeptide 2 - Tribolium castaneum
Length = 4199
Score = 34.3 bits (75), Expect = 3.7
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Frame = +3
Query: 270 ERTMDAMVKEIL---HKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDKDGLRKEEI 440
++T+D + K+++ KK +E ++ +L + +D++ +L+ + E + LRKEE
Sbjct: 1040 DQTLDELHKQLMSIKEKKVQWQELMDKKDKLFSDYDKFNIEKPQLELMEEIETDLRKEED 1099
Query: 441 SALSGPHEFQEFYSRLKQIKEFQENIQMKYLYPCL*NLKSWANQRENPAEDYTVPVEFTD 620
S F+EFY+ L+ + + K LY L +W + +N + ++
Sbjct: 1100 SWTL----FEEFYNELETMTSEDWIVFRKKLYRFEDFLNNWQTKLKNTNNGNALQIKILH 1155
Query: 621 EEGLWESI 644
E +E I
Sbjct: 1156 EIQKFEGI 1163
>UniRef50_Q24I25 Cluster: Protein kinase domain containing protein;
n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
domain containing protein - Tetrahymena thermophila
SB210
Length = 728
Score = 34.3 bits (75), Expect = 3.7
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +3
Query: 237 NFRATKYHEERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYEDK 416
+ + KY + E T+D ++KE L++ + I R N+ + +I + ++
Sbjct: 161 SLKTKKYKQIAEITVDTLIKENLNEDLSQKRIITLLQR--NIEAHLPQLNINIAKILYLC 218
Query: 417 DGLRKE--EISALSGPHEFQEFYSRLKQIKE-FQENIQMKYLY 536
D L +E +I G E Q+ + L QI E +E + +Y
Sbjct: 219 DELEREYFDILERQGAQESQKLFDALDQIHETIEETVNTNKIY 261
>UniRef50_Q6FA68 Cluster: Putative tellurique resistant protein;
n=1; Acinetobacter sp. ADP1|Rep: Putative tellurique
resistant protein - Acinetobacter sp. (strain ADP1)
Length = 380
Score = 33.9 bits (74), Expect = 4.9
Identities = 20/84 (23%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +3
Query: 279 MDAMVKEILHKKTGHRETINA-DHRLKNLHDRYIEASIRLKELYEDKDGLRKEEISALSG 455
+DA+VKEI H ++G + +N DH + D Y + I + + K +++I+ LS
Sbjct: 141 LDALVKEIEHSQSGLKTRVNTLDHMFSAVQDEYKQLGIHV-AAGQIKQHELQQKIAELSQ 199
Query: 456 PHEFQEFYSRLKQIKEFQENIQMK 527
+ Q ++ + N++ +
Sbjct: 200 KEQDQHTTQQIYDLNHLVNNLEKR 223
>UniRef50_A3DGE1 Cluster: ABC transporter related protein; n=2;
Clostridium|Rep: ABC transporter related protein -
Clostridium thermocellum (strain ATCC 27405 / DSM 1237)
Length = 638
Score = 33.9 bits (74), Expect = 4.9
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 264 ERERT-MDAMVKEILHKKTGHRETINADH-RLKNLHDRYIEASIRLKELYEDKDGLRKE 434
E+E T +A +KEI ++ T E + +DH +L LH+ E +++L++LYE D L E
Sbjct: 579 EKEITDTEARIKEIENQMTN--EEVVSDHVKLVELHNELNELNLKLEQLYELWDNLMSE 635
>UniRef50_UPI0000DA32F1 Cluster: PREDICTED: similar to ciliary rootlet
coiled-coil, rootletin; n=9; Eutheria|Rep: PREDICTED:
similar to ciliary rootlet coiled-coil, rootletin -
Rattus norvegicus
Length = 1735
Score = 33.1 bits (72), Expect = 8.6
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 246 ATKYHEERERTMDAMVKEILHKKTG-HRETINADHRLKNLHDRYIEASIRLKELYEDKDG 422
A H+ T+ ++EI +++ RE +L H+R E L++ E ++G
Sbjct: 1073 AISTHQREAETLREKLREIAAERSSVRREAEGLQAQLNVAHERLAELRQELQDSEESREG 1132
Query: 423 LRKEEISA 446
LR+E + A
Sbjct: 1133 LRREALEA 1140
>UniRef50_A7SF38 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 3031
Score = 33.1 bits (72), Expect = 8.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +3
Query: 261 EERERTMDAMVKEILHKKTGHRETINADHRLKNLHDRYIEASIRLKELYED-KDG 422
EE E + E+ H + HR+ + K +++R ++ +R+ +LYE+ +DG
Sbjct: 14 EEEEDDQGQRMVELKHNQPDHRDAVQKKTFTKWVNNRLLKVGVRILDLYEELRDG 68
>UniRef50_Q6BPR8 Cluster: Similar to sp|P19736 Saccharomyces
cerevisiae YDL030w PRP9 pre-mRNA splicing factor; n=1;
Debaryomyces hansenii|Rep: Similar to sp|P19736
Saccharomyces cerevisiae YDL030w PRP9 pre-mRNA splicing
factor - Debaryomyces hansenii (Yeast) (Torulaspora
hansenii)
Length = 518
Score = 33.1 bits (72), Expect = 8.6
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 635 GKYLDLHSCYEKYINLKXIEKVDYITYLSIFD 730
GKYLDL YE Y ++ V Y+ YLSI+D
Sbjct: 177 GKYLDLFPFYETYKSIVD-HNVTYVEYLSIYD 207
>UniRef50_Q2FTB0 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 694
Score = 33.1 bits (72), Expect = 8.6
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = +1
Query: 139 NLNFKIINHYFNIIVFYKVIDIKQFL*PLKMETILEQRSTMRKGKEPWTQWSKKFFTKKL 318
NLN KII Y IIV Y ++ L IL T+ G E +T WS + TKK+
Sbjct: 2 NLNRKIIREYVIIIVLYALLTA-----ILTYPMILHVSDTIGGGDEAFTCWSLTWTTKKV 56
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 704,819,217
Number of Sequences: 1657284
Number of extensions: 13400585
Number of successful extensions: 36269
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 34637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36235
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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