Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0206
         (678 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g21080.1 68414.m02637 DNAJ heat shock N-terminal domain-conta...    31   0.93 
At4g13130.1 68417.m02045 DC1 domain-containing protein contains ...    30   1.2  
At3g47750.1 68416.m05202 ABC transporter family protein probable...    30   1.6  
At1g76700.1 68414.m08925 DNAJ heat shock N-terminal domain-conta...    30   1.6  
At3g47760.1 68416.m05203 ABC transporter family protein probable...    29   2.1  
At5g49070.1 68418.m06072 beta-ketoacyl-CoA synthase family prote...    29   3.7  

>At1g21080.1 68414.m02637 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|P39101 CAJ1
           protein [Saccharomyces cerevisiae]; contains Pfam
           profile PF00226 DnaJ domain;
          Length = 391

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +2

Query: 410 FTNTTQAQRVNVSNASYMVDRVGVLGFIFVTE 505
           FT+  +A+   +SNA+Y V+ +  +G+I+V +
Sbjct: 157 FTSNAEAEVTRLSNAAYGVEMLNTIGYIYVRQ 188


>At4g13130.1 68417.m02045 DC1 domain-containing protein contains
           Pfam protein PF03107 DC1 domain
          Length = 767

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 294 NKSKKLNCPLHTHKLDCARERDGQIFMMRMQCDVTPR 404
           N S+K++ P+H HKL+     DG     +  C V PR
Sbjct: 506 NFSRKIHNPIHPHKLNLVGGYDGVTKYYKDFCSVCPR 542


>At3g47750.1 68416.m05202 ABC transporter family protein probable
           transport protein ABC-C, Homo sapiens, PIR2:S71363
          Length = 944

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/31 (45%), Positives = 17/31 (54%)
 Frame = -1

Query: 615 IAGISAHFFVXGISFFRFISYCIAFIAGFEC 523
           I  +S  F + G+ FFRF  Y I FI  F C
Sbjct: 409 IEQVSELFLLVGLKFFRFNDYSIQFIFYFLC 439


>At1g76700.1 68414.m08925 DNAJ heat shock N-terminal
           domain-containing protein similar to SP|P39101 CAJ1
           protein, Saccharomyces cerevisiae; contains Pfam profile
           PF00226 DnaJ domain
          Length = 398

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +2

Query: 410 FTNTTQAQRVNVSNASYMVDRVGVLGFIFVTE 505
           F +  +A+   +SNA+Y VD +  +G+I+V +
Sbjct: 158 FISNAEAEVARLSNAAYGVDMLNTIGYIYVRQ 189


>At3g47760.1 68416.m05203 ABC transporter family protein probable
           transport protein ABC-C, Homo sapiens, PIR2:S71363
          Length = 872

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 606 ISAHFFVXGISFFRFISYCIAFIAGFEC 523
           +S  F + G+ FFRF  Y I FI  F C
Sbjct: 351 VSELFLLVGLKFFRFNDYSIQFIFYFLC 378


>At5g49070.1 68418.m06072 beta-ketoacyl-CoA synthase family protein
           similar to very-long-chain fatty acid condensing enzyme
           CUT1 [GI:5001734], beta-ketoacyl-CoA synthase
           [Simmondsia chinensis][GI:1045614]
          Length = 464

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 549 IAFIAGFECSDRIKNSVTKIKPNT 478
           IAF +GF+C+  +   + K++PNT
Sbjct: 417 IAFGSGFKCNSAVWRCIRKVEPNT 440


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,615,190
Number of Sequences: 28952
Number of extensions: 228154
Number of successful extensions: 418
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)