Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0205
         (797 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g13550.1 68418.m01565 sulfate transporter family protein simi...    29   3.6  
At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR...    29   3.6  
At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR...    29   3.6  
At1g33520.1 68414.m04148 KOW domain-containing protein / D111/G-...    29   4.7  

>At5g13550.1 68418.m01565 sulfate transporter family protein similar
           to sulfate transporter [Arabidopsis thaliana]
           GI:3777483; contains Pfam profiles PF00916: Sulfate
           transporter family, PF01740: STAS domain
          Length = 685

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -1

Query: 647 SMIFIIPQFQYIPLCLFVAPTSSHLGVLAD 558
           S++F+ P F+YIP C   A   S +  L D
Sbjct: 418 SLLFLTPMFKYIPQCALAAIVISAVSGLVD 447


>At1g27180.1 68414.m03311 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1556

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 178  WFHQLPEEPVTLP--KTLSTEQIEQLRKKPPVPC 273
            +FH LP   V L   + LS     +L++ PP+PC
Sbjct: 1271 YFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPC 1304


>At1g27170.1 68414.m03310 disease resistance protein (TIR-NBS-LRR
            class), putative domain signature TIR-NBS-LRR exists,
            suggestive of a disease resistance protein.
          Length = 1544

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 178  WFHQLPEEPVTLP--KTLSTEQIEQLRKKPPVPC 273
            +FH LP   V L   + LS     +L++ PP+PC
Sbjct: 1257 YFHSLPSSLVKLSNLQELSLRDCRELKRLPPLPC 1290


>At1g33520.1 68414.m04148 KOW domain-containing protein /
           D111/G-patch domain-containing protein contains Pfam
           profiles PF01585: G-patch domain, PF00467: KOW motif
          Length = 462

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 115 KKGQGIAKNFAESLEYGEKKKW 180
           K G+GI KN  E +E  E KKW
Sbjct: 170 KPGKGIGKNAKEDVEIKEYKKW 191


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,848,883
Number of Sequences: 28952
Number of extensions: 359663
Number of successful extensions: 939
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)