Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0202
(827 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 92 4e-19
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 70 2e-12
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 42 8e-04
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 36 0.030
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 36 0.030
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 36 0.030
SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021) 36 0.030
SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.093
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 35 0.093
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 35 0.093
SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093) 34 0.16
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 33 0.28
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.65
SB_15719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.86
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.5
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 31 1.5
SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05) 30 2.0
SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3) 29 3.5
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.5
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_15535| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 28 8.0
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 92.3 bits (219), Expect = 4e-19
Identities = 41/97 (42%), Positives = 63/97 (64%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P + + K + VFLK+DVD C + A+ QGV+AMPTF F++N+ K+D + G + LE+
Sbjct: 47 PVYSGLSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKVKVDEVRGADPKALED 106
Query: 397 KVRQYYGSDVAEEDEDNTVAGHMDLITFITKSECECL 507
++++ G D E+ V GH+DL ++I KS CECL
Sbjct: 107 AIKKWIG-DGEEDGAGCGVKGHVDLNSYINKSGCECL 142
Score = 92.3 bits (219), Expect = 4e-19
Identities = 49/105 (46%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Frame = +3
Query: 507 NEADDHPLAQALTNDRGYLASYCDEQLIINISFNQLVKLHSIKIKGPAD-KGPKSIKLFI 683
NE ++HPL ALT G+L S CDEQL+I++SFNQ VKLHS+K++ P D + PK +KLFI
Sbjct: 143 NEDNEHPLNDALTKGPGFLQSDCDEQLLISLSFNQPVKLHSMKLQAPNDGQAPKVVKLFI 202
Query: 684 NQPRTLDFDQGCWLLISARLRANSERLGRQSWYHFKFVQXQSVPN 818
NQ ++LDFD L E + KFV+ Q+V N
Sbjct: 203 NQTKSLDFDSAENFQAIQTLELTPEDVQEDVIIPLKFVKLQNVLN 247
Score = 65.3 bits (152), Expect = 6e-11
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2
Query: 98 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
G V++ D+ F E+ NAGTKLVV DFTA+WC PC+ IAP + L K+ + F K
Sbjct: 7 GNVKVLELDSQFTAELTNAGTKLVVADFTASWCGPCKSIAPVYSGLSEKYKQAVFLK 63
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 70.1 bits (164), Expect = 2e-12
Identities = 32/64 (50%), Positives = 42/64 (65%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P F + K + VFLKVDVD+C TA + G+ AMPTF FY N+ KID L G + LEN
Sbjct: 48 PVFTNLSMKFMDVVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKAKIDELRGADPGALEN 107
Query: 397 KVRQ 408
K+++
Sbjct: 108 KIKE 111
Score = 64.9 bits (151), Expect = 8e-11
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +2
Query: 98 GLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
G V+++D+ F E+ AG++LVV+DFTATWC PC+ IAP F L KF F K
Sbjct: 8 GNVIVVEDDSFFSVEIERAGSRLVVIDFTATWCGPCKSIAPVFTNLSMKFMDVVFLK 64
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLP-AKFPREYFSK*T*TDAP 289
I+ A F + + N KLVV+DF A WC PC++I P F+++ +F +F+K +
Sbjct: 15 IEERAEFNSVINNTKDKLVVIDFYAEWCGPCRQIKPKFKKMALEEFKDVFFAKIDVDELE 74
Query: 290 IQRVLRAS 313
+++++ A+
Sbjct: 75 LEKLVGAN 82
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 41.5 bits (93), Expect = 8e-04
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
++ +DFTATWC PC+ I P FE++ +F
Sbjct: 12 EVAAIDFTATWCGPCRMIGPKFEEMAKEF 40
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
N +F T++ A VVDF A WC PC R AP +EQL
Sbjct: 439 NSKNFFTDVL-ASEDAWVVDFYAPWCGPCMRFAPKYEQL 476
Score = 35.1 bits (77), Expect = 0.070
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 173 VDFTATWCPPCQRIAPFFEQLPAKF 247
VDF A WCPPC R+ P + + F
Sbjct: 307 VDFFAPWCPPCMRLLPEYRKAARSF 331
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 140 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
E+A K V V+F A WC C+++AP ++QL K+
Sbjct: 396 EVARNKDKNVFVEFYAPWCGHCKQLAPIWDQLGEKY 431
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 146 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRE 256
A A K V+V+F A WC C+ +AP + + + E
Sbjct: 37 AVAANKHVLVEFYAPWCGHCKALAPEYAKAAGQLKSE 73
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 140 EMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
E+ N G K +V+F A WC C+++AP +EQL
Sbjct: 34 EVVN-GEKFALVEFYAPWCGHCKQLAPTYEQL 64
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 36.3 bits (80), Expect = 0.030
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFE 229
ND +F + + V+VDF A WC CQR++P F+
Sbjct: 57 NDQNFNETIKK--NEYVLVDFYAPWCSDCQRLSPLFD 91
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
+D++F E A K V+VDF A WC C+++AP ++ +
Sbjct: 140 DDSNF--EPAVQKHKFVLVDFYAPWCFHCKKMAPDYKDV 176
>SB_6126| Best HMM Match : Thioredoxin (HMM E-Value=0.021)
Length = 293
Score = 36.3 bits (80), Expect = 0.030
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFE 229
K+V + F+A+WCPPCQ+ P +
Sbjct: 155 KVVAIYFSASWCPPCQKFTPLLK 177
>SB_47083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 211
Score = 36.3 bits (80), Expect = 0.030
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +3
Query: 558 YLASYCDEQLIINISFNQLVKLHS-IKIKGPADKGPKSIKLFINQPRTLDFD 710
++ S DE+L+ NI F VKL + I I G + P +KLF N+P + FD
Sbjct: 67 FVESDVDEELLFNIPFTGSVKLKALIVIGGEGGEHPSEVKLFKNRP-AMTFD 117
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 34.7 bits (76), Expect = 0.093
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 122 DAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
D +F+ E+ N+ L +V+F A WC CQR+AP
Sbjct: 86 DTNFEKEVLNS-KDLWLVEFFAPWCGHCQRLAP 117
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 34.7 bits (76), Expect = 0.093
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +2
Query: 122 DAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFE 229
D++F++ +A G +++V+F A WC C+R+AP +E
Sbjct: 545 DSNFKSGVA--GKDIMLVEFFAPWCGHCKRLAPEYE 578
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 34.7 bits (76), Expect = 0.093
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +2
Query: 122 DAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFE 229
D++F++ +A G +++V+F A WC C+R+AP +E
Sbjct: 20 DSNFKSGVA--GKDIMLVEFFAPWCGHCKRLAPEYE 53
>SB_21263| Best HMM Match : Thioredoxin (HMM E-Value=0.00093)
Length = 148
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAP----FFEQL 235
K++ V F+A WCPPC++ P F+E+L
Sbjct: 26 KVIAVYFSAHWCPPCRQFTPILKDFYEEL 54
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 33.1 bits (72), Expect = 0.28
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = +2
Query: 140 EMANAGT---KLVVVDFTATWCPPCQRIAP 220
E+ NAG K+V + F+A WCPPC+ P
Sbjct: 164 EVINAGDLKGKIVGIYFSAHWCPPCRAFTP 193
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 110 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
++ E + K+V + F+A WCPPC+ P
Sbjct: 13 LVGKHGQISVESLSGEGKIVGLYFSAHWCPPCRGFTP 49
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 31.9 bits (69), Expect = 0.65
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 137 TEMANAGTKLVVVDFTATWCPPCQRIAPFFEQ 232
TE+ N + L++V+F A WC C+++AP +E+
Sbjct: 187 TEVVNRES-LMLVEFFAPWCGHCKQLAPEYEK 217
>SB_15719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = -1
Query: 593 DYQLFITVTSKVSPVICQCLGKWMIISLIKHSHSLLVMNVI 471
++ +FITVTS V+PV W I I H H+ +M +I
Sbjct: 208 EFVIFITVTSFVAPVGVMIFAYWRIFK-IAHRHATRIMAMI 247
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 30.7 bits (66), Expect = 1.5
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPREY 259
++++VDF A WC C + P +E+ +E+
Sbjct: 40 EVMLVDFYAPWCSDCDNLRPKYEKAARDLAKEH 72
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 155 GTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
G+K V + F A W CQRI F+Q+ +F
Sbjct: 42 GSKFVFIFFYAPWDDHCQRILQIFDQVADEF 72
>SB_2701| Best HMM Match : Thioredoxin (HMM E-Value=4.8e-05)
Length = 215
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 131 FQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
F ++++ L VV F A W P C ++ E+L + P F K
Sbjct: 12 FDRILSSSSNVLAVVHFFAPWAPHCNQMNDVLEELAKENPHVNFIK 57
>SB_13486| Best HMM Match : DUF1530 (HMM E-Value=2.3)
Length = 222
Score = 29.5 bits (63), Expect = 3.5
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQ 208
K+ ++DF A+WC PC+
Sbjct: 178 KVTIIDFWASWCQPCR 193
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 154 WNQVSRCGLYSNLVSTVPKDCPF 222
W GLYS LV+TV +D PF
Sbjct: 475 WTNEGGRGLYSGLVATVARDAPF 497
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 28.7 bits (61), Expect = 6.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 164 LVVVDFTATWCPPCQRIAPFFE 229
+++VDF A WC CQ + P E
Sbjct: 39 IMLVDFYAPWCHHCQELLPQLE 60
>SB_15535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 837
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +2
Query: 188 TWCPPCQRIAPFFEQLPAKFPREYFSK*T*TDAPIQRVLRASVQC 322
+W + FF+ + +F REYF +D P +RV + ++ C
Sbjct: 561 SWISNKVNVRKFFQHISVQFGREYFY----SDLPSRRVFQNNISC 601
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 265 KVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEG 372
KVD+D + A GV+A+PT I + I++ EG
Sbjct: 28 KVDIDVMGELAFNFGVNAVPTVIGMKGGKVINKFEG 63
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 173 VDFTATWCPPCQRIAPFFEQLPAKF 247
V F A WC C ++AP +E+L F
Sbjct: 111 VKFYAPWCIHCIKLAPIWERLAEDF 135
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,107,171
Number of Sequences: 59808
Number of extensions: 441342
Number of successful extensions: 1081
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2323539746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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