Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0202
(827 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g04780.1 68416.m00515 expressed protein 62 6e-10
At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identica... 56 4e-08
At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL) i... 55 5e-08
At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to te... 55 7e-08
At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN) i... 55 7e-08
At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1) i... 52 4e-07
At3g08710.1 68416.m01012 thioredoxin family protein similar to t... 52 4e-07
At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38... 51 8e-07
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 48 8e-06
At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2) i... 47 2e-05
At1g11530.1 68414.m01324 thioredoxin family protein similar to t... 46 2e-05
At3g56420.1 68416.m06275 thioredoxin family protein similar to t... 46 4e-05
At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29... 45 7e-05
At4g04950.1 68417.m00719 thioredoxin family protein similar to P... 44 9e-05
At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29... 43 3e-04
At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38... 43 3e-04
At2g40790.1 68415.m05032 thioredoxin family protein contains Pfa... 42 4e-04
At4g32580.1 68417.m04638 thioredoxin family protein contains Pfa... 40 0.002
At3g53220.1 68416.m05864 thioredoxin family protein low similari... 40 0.002
At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to thiore... 40 0.003
At4g29670.2 68417.m04227 thioredoxin family protein contains Pfa... 38 0.011
At4g29670.1 68417.m04226 thioredoxin family protein contains Pfa... 38 0.011
At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-... 38 0.011
At2g01270.1 68415.m00040 thioredoxin family protein low similari... 38 0.011
At4g26160.1 68417.m03765 thioredoxin family protein low similari... 37 0.014
At2g47470.2 68415.m05924 thioredoxin family protein similar to p... 37 0.014
At2g47470.1 68415.m05925 thioredoxin family protein similar to p... 37 0.014
At1g52990.1 68414.m05997 thioredoxin family protein similar to S... 37 0.019
At5g61440.1 68418.m07709 thioredoxin family protein low similari... 36 0.025
At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containi... 36 0.025
At1g43560.1 68414.m05000 thioredoxin family protein contains Pfa... 36 0.043
At1g15020.2 68414.m01795 thioredoxin family protein low similari... 36 0.043
At1g15020.1 68414.m01794 thioredoxin family protein low similari... 36 0.043
At2g35010.1 68415.m04295 thioredoxin family protein similar to S... 35 0.057
At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-... 35 0.057
At1g50320.1 68414.m05641 thioredoxin x nearly identical to thior... 35 0.076
At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-... 34 0.10
At1g76760.1 68414.m08933 thioredoxin family protein similar to t... 34 0.10
At1g77510.1 68414.m09026 protein disulfide isomerase, putative s... 34 0.13
At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containi... 33 0.18
At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containi... 33 0.23
At1g21750.2 68414.m02723 protein disulfide isomerase, putative s... 33 0.31
At1g21750.1 68414.m02722 protein disulfide isomerase, putative s... 33 0.31
At1g04980.1 68414.m00497 thioredoxin family protein similar to S... 33 0.31
At2g33270.1 68415.m04078 thioredoxin family protein contains Pfa... 32 0.40
At3g06730.1 68416.m00798 thioredoxin family protein contains Pfa... 32 0.53
At5g40370.1 68418.m04897 glutaredoxin, putative similar to gluta... 31 0.71
At1g60420.1 68414.m06802 DC1 domain-containing protein contains ... 31 0.71
At1g08570.1 68414.m00950 thioredoxin family protein contains Pfa... 31 0.93
At3g03860.1 68416.m00398 expressed protein 30 1.6
At2g32920.1 68415.m04036 thioredoxin family protein similar to S... 30 2.2
At4g37200.1 68417.m05266 thioredoxin family protein contains Pfa... 29 3.8
At1g35620.1 68414.m04425 thioredoxin family protein similar to S... 29 3.8
At5g60640.2 68418.m07611 thioredoxin family protein similar to p... 29 5.0
At5g60640.1 68418.m07610 thioredoxin family protein similar to p... 29 5.0
>At3g04780.1 68416.m00515 expressed protein
Length = 176
Score = 61.7 bits (143), Expect = 6e-10
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
Frame = +3
Query: 507 NEADDHPLAQALTN----DRGY-LASYCDEQLIINISFNQLVKLHSIKIKGPADKGPKSI 671
N++ H L AL D G L S DEQL+I I FNQ++KLHS IKGP ++GPK++
Sbjct: 29 NQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFNQVIKLHSFAIKGPEEEGPKTV 88
Query: 672 KLFINQ 689
K F N+
Sbjct: 89 KFFSNK 94
>At3g51030.1 68416.m05587 thioredoxin H-type 1 (TRX-H-1) identical
to SP|P29448 Thioredoxin H-type 1 (TRX-H-1) {Arabidopsis
thaliana}
Length = 114
Score = 55.6 bits (128), Expect = 4e-08
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = +2
Query: 134 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
Q + AN LVVVDFTA+WC PC+ IAPFF L K P F K
Sbjct: 20 QLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLK 64
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
PFF K+ +FLKVD D AS + AMPTF+F + +D++ G L++
Sbjct: 48 PFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQS 107
Query: 397 KVRQY 411
+ ++
Sbjct: 108 TIAKH 112
>At1g45145.1 68414.m05175 thioredoxin H-type 5 (TRX-H-5) (TOUL)
identical to SP|Q39241 Thioredoxin H-type 5 (TRX-H-5)
{Arabidopsis thaliana}; identical to cDNA (TOUL) mRNA
for thioredoxin GI:992965
Length = 118
Score = 55.2 bits (127), Expect = 5e-08
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +2
Query: 146 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
AN KL+V+DFTA+WCPPC+ IAP F ++ KF F K
Sbjct: 23 ANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFK 63
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/67 (34%), Positives = 32/67 (47%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P F K + VF K+DVD A V AMPTF+F + IDR+ G +
Sbjct: 47 PVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINE 106
Query: 397 KVRQYYG 417
K+ ++ G
Sbjct: 107 KLMKHGG 113
>At3g17880.1 68416.m02278 tetratricoredoxin (TDX) identical to
tetratricoredoxin [Arabidopsis thaliana] GI:18041544;
similar to SP|Q42443 Thioredoxin H-type (TRX-H) (Phloem
sap 13 kDa protein-1) {Oryza sativa}; contains Pfam
profile: PF00085 Thioredoxin
Length = 380
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/68 (35%), Positives = 42/68 (61%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P + ++ S VFLKVD+D+ D A++ +S++PTF F R+ ++D++ G + LE
Sbjct: 312 PLYSNLATQHSRVVFLKVDIDKANDVAASWNISSVPTFCFIRDGKEVDKVVGADKGSLEQ 371
Query: 397 KVRQYYGS 420
K+ Q+ S
Sbjct: 372 KIAQHSSS 379
Score = 42.7 bits (96), Expect = 3e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 134 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
+T+ A ++L+++ FTATWC PC+ ++P + L + R F K
Sbjct: 284 KTKAAKKASRLLILYFTATWCGPCRYMSPLYSNLATQHSRVVFLK 328
>At1g19730.1 68414.m02465 thioredoxin H-type 4 (TRX-H-4) (GREN)
identical to SP|Q39239 Thioredoxin H-type 4 (TRX-H-4)
{Arabidopsis thaliana}
Length = 119
Score = 54.8 bits (126), Expect = 7e-08
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +2
Query: 134 QTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
Q + A KL+V+DFTA+WCPPC+ IAP F L KF
Sbjct: 20 QLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKF 57
Score = 51.2 bits (117), Expect = 8e-07
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +1
Query: 217 PFFRAATSK-VSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLE 393
P F K +S +F KVDVD A GV AMPTF+F + +D+L G N L+
Sbjct: 48 PIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQ 107
Query: 394 NKVRQYYGSDVA 429
K+ ++ G A
Sbjct: 108 AKIVKHTGVTTA 119
>At5g42980.1 68418.m05242 thioredoxin H-type 3 (TRX-H-3) (GIF1)
identical to SP|Q42403 Thioredoxin H-type 3 (TRX-H-3)
{Arabidopsis thaliana}; identical to cDNA (GIF1) mRNA
for thioredoxin GI:992961
Length = 118
Score = 52.4 bits (120), Expect = 4e-07
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = +2
Query: 146 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAK 244
AN KL+V+DFTATWCPPC+ IAP F L K
Sbjct: 23 ANESKKLIVIDFTATWCPPCRFIAPVFADLAKK 55
Score = 35.5 bits (78), Expect = 0.043
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYR 342
P F K + VF KVDVD A V AMPTFIF +
Sbjct: 47 PVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMK 88
>At3g08710.1 68416.m01012 thioredoxin family protein similar to
thioredoxin H-type GB:P29448 SP|P29448 [Arabidopsis
thaliana], Thioredoxin H-type 2 (TRX-H2) SP|Q07090
{Nicotiana tabacum}; contains Pfam profile: PF00085
Thioredoxin
Length = 140
Score = 52.4 bits (120), Expect = 4e-07
Identities = 26/62 (41%), Positives = 36/62 (58%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
PFF + K S +FL VDVD +D +S+ + A PTF F +N +I +L G N L+
Sbjct: 65 PFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQK 124
Query: 397 KV 402
KV
Sbjct: 125 KV 126
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 146 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAK 244
A+ K+VV +F+ATWC PC+ +APFF +L K
Sbjct: 41 ADRDGKIVVANFSATWCGPCKIVAPFFIELSEK 73
>At1g59730.1 68414.m06725 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 129
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/65 (38%), Positives = 33/65 (50%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P R SK SE VF +VDVDR D A +P F+F + +IDR+ G L
Sbjct: 63 PRVREIASKYSEAVFARVDVDRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVK 122
Query: 397 KVRQY 411
K+ Q+
Sbjct: 123 KIEQH 127
Score = 41.5 bits (93), Expect = 7e-04
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
KL+V+DFTA WC PC+ + P ++ +K+ F++
Sbjct: 44 KLLVIDFTAVWCGPCKAMEPRVREIASKYSEAVFAR 79
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 48.0 bits (109), Expect = 8e-06
Identities = 22/67 (32%), Positives = 36/67 (53%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
PF + ++ FLKVD+D+C +A+ V +PT Y+N +++ + + VLE
Sbjct: 633 PFVDSLCTRYPSIHFLKVDIDKCPSIGNAENVRVVPTVKIYKNGSRVKEIVCPSKEVLEY 692
Query: 397 KVRQYYG 417
VR Y G
Sbjct: 693 SVRHYSG 699
>At5g39950.1 68418.m04844 thioredoxin H-type 2 (TRX-H-2) (Gif2)
identical to SP|Q38879 Thioredoxin H-type 2 (TRX-H-2)
{Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA
for thioredoxin GI:992963
Length = 133
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P A K ++ F+K+DVD D A V+AMPTF+ + +I+R+ G LE
Sbjct: 67 PAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEK 126
Query: 397 KV 402
KV
Sbjct: 127 KV 128
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
KL+VVDF+A+WC PC+ I P + KF
Sbjct: 48 KLLVVDFSASWCGPCRMIEPAIHAMADKF 76
>At1g11530.1 68414.m01324 thioredoxin family protein similar to
thioredoxin H-type from Arabidopsis thaliana SP|P29448,
Nicotiana tabacum SP|Q07090; contains Pfam profile:
PF00085 Thioredoxin
Length = 118
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 220 FFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENK 399
FF + +FL VDVD + AS V AMPTF+F ++ +D+L G N ++ +
Sbjct: 45 FFEELAFNYKDALFLIVDVDEVKEVASQLEVKAMPTFLFLKDGNAMDKLVGANPDEIKKR 104
Query: 400 V 402
V
Sbjct: 105 V 105
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQLPAKFPREYF 262
+V FTA WC P + FFE+L + F
Sbjct: 27 IVAHFTALWCIPSVFMNSFFEELAFNYKDALF 58
>At3g56420.1 68416.m06275 thioredoxin family protein similar to
thioredoxin [Nicotiana tabacum] GI:20047; contains Pfam
profile: PF00085 Thioredoxin
Length = 100
Score = 45.6 bits (103), Expect = 4e-05
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P FR S+ +F+ VDV+ A+ ++ V A PT +F ++ ++D+L G T+ L+
Sbjct: 28 PVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSELQK 87
Query: 397 K 399
K
Sbjct: 88 K 88
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 146 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYF 262
AN G K + A WC PC++I P F L +++P F
Sbjct: 6 ANTGPKERSI--RAPWCVPCKKIEPVFRDLASRYPSMIF 42
>At5g16400.1 68418.m01917 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 185
Score = 44.8 bits (101), Expect = 7e-05
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 92 TMGLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
T+G T + D + A AG K+VV+D WC PC+ IAP +++L K+ F K
Sbjct: 76 TVGQVTEVDKDTFWPIVKA-AGDKIVVLDMYTQWCGPCKVIAPKYKELSEKYQDMVFLK 133
>At4g04950.1 68417.m00719 thioredoxin family protein similar to
PKCq-interacting protein PICOT from [Mus musculus]
GI:6840949, [Rattus norvegicus] GI:6840951; contains
Pfam profile PF00085: Thioredoxin
Length = 488
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/59 (32%), Positives = 35/59 (59%)
Frame = +1
Query: 259 FLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQYYGSDVAEE 435
F +V+ + + + A V+A+P F+F+++ +D LEG + + L NKV + GS + E
Sbjct: 55 FFRVEAEEHPEISEAYSVAAVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAGSSTSAE 113
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQLPAKFPREYF 262
VV+ F A+WC +++ F L FPR +F
Sbjct: 24 VVLHFWASWCDASKQMDQVFSHLATDFPRAHF 55
>At3g02730.1 68416.m00265 thioredoxin, putative similar to SP|P29450
Thioredoxin F-type, chloroplast precursor (TRX-F) {Pisum
sativum}; contains Pfam profile: PF00085 Thioredoxin
Length = 178
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +2
Query: 92 TMGLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
++G T + D + A AG KLVV+D WC PC+ IAP ++ L K+ F K
Sbjct: 66 SVGQVTEVDKDTFWPIVKA-AGEKLVVLDMYTQWCGPCKVIAPKYKALSEKYDDVVFLK 123
>At1g69880.1 68414.m08042 thioredoxin, putative similar to SP|Q38879
Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana};
contains Pfam profile: PF00085 Thioredoxin
Length = 148
Score = 42.7 bits (96), Expect = 3e-04
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
KL+V++FTA WC PC+ + P E+L AK+ F K
Sbjct: 60 KLLVIEFTAKWCGPCKTLEPKLEELAAKYTDVEFVK 95
Score = 34.3 bits (75), Expect = 0.10
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P +K ++ F+K+DVD +S +P +F + ++D + G LE
Sbjct: 79 PKLEELAAKYTDVEFVKIDVDVLMSVWMEFNLSTLPAIVFMKRGREVDMVVGVKVDELER 138
Query: 397 KVRQY 411
K+ +Y
Sbjct: 139 KLNKY 143
>At2g40790.1 68415.m05032 thioredoxin family protein contains Pfam
profile: PF00085 thioredoxin
Length = 154
Score = 42.3 bits (95), Expect = 4e-04
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P ++ S + +F+ +DV+ A+ + V A PT +F ++ ++D+L GG+ L+
Sbjct: 82 PIYQELASTYTSMIFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAELQK 141
Query: 397 K 399
K
Sbjct: 142 K 142
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 146 ANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYF 262
AN+ K++VV+F A+WC P + I P +++L + + F
Sbjct: 58 ANSHGKILVVNFKASWCLPSKTILPIYQELASTYTSMIF 96
>At4g32580.1 68417.m04638 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 160
Score = 40.3 bits (90), Expect = 0.002
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +1
Query: 259 FLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQYYGS 420
F +V+ + + + A V+ +P F+F+++ +D LEG + + L NKV + GS
Sbjct: 55 FFRVEAEEHPEISEAYSVALVPYFVFFKDGKTVDTLEGADPSSLANKVGKVAGS 108
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQLPAKFPREYF 262
+V+ F A+WC +++ F L FPR +F
Sbjct: 24 LVLHFWASWCDASKQMDQVFSHLATDFPRAHF 55
>At3g53220.1 68416.m05864 thioredoxin family protein low similarity
to SP|P29451 Thioredoxin [Rhesus macaque] {Macaca
mulatta}; contains Pfam profile: PF00085 Thioredoxin
Length = 126
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLEN 396
P FR ++ S+ F+ D+D C +T + + PTF FYR+ K+D + G L +
Sbjct: 63 PAFRKLSNSFSKLKFVYADIDECPETT--RHIRYTPTFQFYRDGEKVDEMFGAGEQRLHD 120
Query: 397 KV 402
++
Sbjct: 121 RL 122
>At1g31020.1 68414.m03798 thioredoxin o (TRXO2) similar to
thioredoxin 2 from Saccharomyces cerevisiae GI:173050,
3'-end of protein contains similarity to thioredoxins;
contains Pfam profile: PF00085 Thioredoxin; identical to
cDNA thioredoxin o (TRXO2) GI:15081458
Length = 159
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +2
Query: 110 VIQNDAHFQTEMANA--GTKLVVVDFTATWCPPCQRIAPFFEQLPAKFP 250
V++++A F + ++ A G+ V FTA WC PC+ I+P +L K+P
Sbjct: 53 VLKSEAEFNSALSKARDGSLPSVFYFTAAWCGPCRLISPVILELSNKYP 101
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +1
Query: 217 PFFRAATSKVSERVFLKVDVDR--CADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVL 390
P ++K + KVD+D ++ VSA+PT F++ K + G + L
Sbjct: 91 PVILELSNKYPDVTTYKVDIDEGGLSNAIGKLNVSAVPTLQFFKGGVKKAEIVGVDVVRL 150
Query: 391 ENKVRQYY 414
++ + Q Y
Sbjct: 151 KSVMEQLY 158
>At4g29670.2 68417.m04227 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 236
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
I + F + ++ AG +LV+V+F TWC C+ + P + + P F K
Sbjct: 108 IHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLK 159
>At4g29670.1 68417.m04226 thioredoxin family protein contains Pfam
profile PF00085: Thioredoxin
Length = 235
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
I + F + ++ AG +LV+V+F TWC C+ + P + + P F K
Sbjct: 108 IHSTEEFLSALSGAGERLVIVEFYGTWCASCRALFPKLCKTAVEHPDIVFLK 159
>At3g15360.1 68416.m01948 thioredoxin M-type 4, chloroplast (TRX-M4)
nearly identical to SP|Q9SEU6 Thioredoxin M-type 4,
chloroplast precursor (TRX-M4) {Arabidopsis thaliana}
Length = 193
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREY 259
+D+ +QT++ + V+V+F A WC PC+ I P +QL F ++
Sbjct: 92 SDSEWQTKVLESDVP-VLVEFWAPWCGPCRMIHPIVDQLAKDFAGKF 137
>At2g01270.1 68415.m00040 thioredoxin family protein low similarity
to quiescin [Homo sapiens] GI:13257405; contains Pfam
profiles PF00085: Thioredoxin, PF04777: Erv1 / Alr
family
Length = 495
Score = 37.5 bits (83), Expect = 0.011
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
N +F + + + K VV+F A WCP C+ P +E++ F
Sbjct: 41 NTTNFDSVLKDTPAKYAVVEFFAHWCPACRNYKPHYEKVARLF 83
>At4g26160.1 68417.m03765 thioredoxin family protein low similarity
to thioredoxin [Ictalurus punctatus] GI:9837585;
contains Pfam profile: PF00085 Thioredoxin
Length = 221
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
I + F + +AG +LV+VDF TWC C+ + P + + P F K
Sbjct: 98 ITSAEQFLNALKDAGDRLVIVDFYGTWCGSCRAMFPKLCKTAKEHPNILFLK 149
>At2g47470.2 68415.m05924 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 266
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 110 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPR 253
V+ D F+ E+ K +V+F A WC C+++AP +E+L A F +
Sbjct: 26 VVLTDDSFEKEVGK--DKGALVEFYAPWCGHCKKLAPEYEKLGASFKK 71
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRE 256
K V+V+F A WC C+ +AP +E++ F +E
Sbjct: 160 KDVLVEFYAPWCGHCKSLAPTYEKVATVFKQE 191
>At2g47470.1 68415.m05925 thioredoxin family protein similar to
protein disulfide isomerase [Dictyostelium discoideum]
GI:2627440; contains Pfam profile: PF00085 Thioredoxin
Length = 361
Score = 37.1 bits (82), Expect = 0.014
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +2
Query: 110 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPR 253
V+ D F+ E+ K +V+F A WC C+++AP +E+L A F +
Sbjct: 26 VVLTDDSFEKEVGK--DKGALVEFYAPWCGHCKKLAPEYEKLGASFKK 71
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRE 256
K V+V+F A WC C+ +AP +E++ F +E
Sbjct: 160 KDVLVEFYAPWCGHCKSLAPTYEKVATVFKQE 191
>At1g52990.1 68414.m05997 thioredoxin family protein similar to
SP|P48384 Thioredoxin M-type, chloroplast precursor
(TRX-M) {Pisum sativum}; contains Pfam profile PF00085:
Thioredoxin
Length = 313
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/41 (36%), Positives = 26/41 (63%)
Frame = +2
Query: 137 TEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREY 259
TE+ N+ T V+V FTA WC PC+ + P ++ +++ E+
Sbjct: 221 TEL-NSQTPHVMVMFTARWCGPCRDMIPILNKMDSEYKNEF 260
>At5g61440.1 68418.m07709 thioredoxin family protein low similarity
to thioredoxin [Callithrix jacchus] GI:13560979;
contains Pfam profile: PF00085 Thioredoxin
Length = 245
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYFSK 268
IQ+ H + NAG +LVV+DF + C C+ + P QL P F K
Sbjct: 90 IQSANHLVDSLLNAGDRLVVLDFYSPGCGGCKSLHPKICQLAETNPNVMFLK 141
>At3g14950.1 68416.m01891 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 721
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 259 FLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 411
FLKV++ +C + +A+ V +PTF Y+ ++ + + LE VR Y
Sbjct: 669 FLKVEIVKCPEVGNAERVRVVPTFKIYKLGIRMKEIVCPSKEALEKTVRHY 719
>At1g43560.1 68414.m05000 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to thioredoxin
GI:142153 from [Synechococcus PCC6301]
Length = 167
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQL 235
K V+VDF ATWC PCQ + P ++
Sbjct: 77 KPVLVDFYATWCGPCQLMVPILNEV 101
Score = 31.1 bits (67), Expect = 0.93
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 262 LKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEG 372
+K+D ++ A+ + A+PTFI +++ DR EG
Sbjct: 112 VKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEG 148
>At1g15020.2 68414.m01795 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 528
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
N +F + ++ K V++F A WCP C+ P +E++ F
Sbjct: 47 NATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLF 89
>At1g15020.1 68414.m01794 thioredoxin family protein low similarity
to FAD-dependent sulfhydryl oxidase-2 [Rattus
norvegicus] GI:12483919; contains Pfam profiles PF00085:
Thioredoxin, PF04777: Erv1 / Alr family
Length = 502
Score = 35.5 bits (78), Expect = 0.043
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 119 NDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
N +F + ++ K V++F A WCP C+ P +E++ F
Sbjct: 47 NATNFDSVFQDSPAKYAVLEFFAHWCPACRNYKPHYEKVARLF 89
>At2g35010.1 68415.m04295 thioredoxin family protein similar to
SP|Q42443 Thioredoxin H-type (TRX-H) {Oryza sativa};
contains Pfam profile: PF00085 Thioredoxin
Length = 194
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +2
Query: 110 VIQNDAHFQTEMANA--GTKLVVVDFTATWCPPCQRIAPFFEQLPAKFP 250
+++++ F M+ A G+ V FTA WC PC+ I+P +L ++P
Sbjct: 88 LVKSEEEFINAMSKAQDGSLPSVFYFTAAWCGPCRFISPVIVELSKQYP 136
>At1g03680.1 68414.m00347 thioredoxin M-type 1, chloroplast (TRX-M1)
nearly identical to SP|O48737 Thioredoxin M-type 1,
chloroplast precursor (TRX-M1) {Arabidopsis thaliana};
similar to ESTs gb|T13714, gb|H76398, gb|N37762,
gb|AA042639, gb|T21104, emb|Z30901
Length = 179
Score = 35.1 bits (77), Expect = 0.057
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREY 259
+ ND+ + + + A V VDF A WC PC+ I P +L K+ ++
Sbjct: 78 VVNDSTWDSLVLKADEP-VFVDFWAPWCGPCKMIDPIVNELAQKYAGQF 125
>At1g50320.1 68414.m05641 thioredoxin x nearly identical to
thioredoxin x GB:AAF15952 GI:6539616 from [Arabidopsis
thaliana]
Length = 182
Score = 34.7 bits (76), Expect = 0.076
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQLPAKF 247
V+V+F ATWC PC+ I P E L ++
Sbjct: 90 VLVEFVATWCGPCKLIYPAMEALSQEY 116
>At4g03520.1 68417.m00480 thioredoxin M-type 2, chloroplast (TRX-M2)
nearly identical to SP|Q9SEU8 Thioredoxin M-type 2,
chloroplast precursor (TRX-M2) {Arabidopsis thaliana}
Length = 186
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 113 IQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
+ ND+ + + + A T VVVDF A WC PC+ I P L
Sbjct: 84 VVNDSTWDSLVLKA-TGPVVVDFWAPWCGPCKMIDPLVNDL 123
>At1g76760.1 68414.m08933 thioredoxin family protein similar to
thioredoxin CH2, M-type, chloroplast precursor GB:P23400
SP|P23400 [Chlamydomonas reinhardtii]; contains Pfam
profile: PF00085 Thioredoxin
Length = 172
Score = 34.3 bits (75), Expect = 0.10
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 131 FQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
F+ + N+ K V+VD+ ATWC PCQ + P ++
Sbjct: 73 FEDLLVNSD-KPVLVDYYATWCGPCQFMVPILNEV 106
Score = 34.3 bits (75), Expect = 0.10
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +1
Query: 214 CPFFRAATSKVSERV-----FLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGN 378
C F ++VSE + +K+D ++ A+ + A+PTFI +++ DR EG
Sbjct: 96 CQFMVPILNEVSETLKDKIQVVKIDTEKYPSIANKYKIEALPTFILFKDGEPCDRFEGAL 155
Query: 379 T 381
T
Sbjct: 156 T 156
>At1g77510.1 68414.m09026 protein disulfide isomerase, putative
similar to protein disulfide isomerase precursor
GB:P29828 GI:4704766 [Medicago sativa]; Pfam HMM hit:
PF00085 Thioredoxins
Length = 508
Score = 33.9 bits (74), Expect = 0.13
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAPFFEQLPAKFPRE 256
K V+++F A WC CQ++AP +++ F +
Sbjct: 391 KNVLIEFYAPWCGHCQKLAPILDEVALSFQND 422
Score = 32.7 bits (71), Expect = 0.31
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQ 232
+VV+F A WC CQ++AP +E+
Sbjct: 49 IVVEFYAPWCGHCQKLAPEYEK 70
>At3g58620.1 68416.m06533 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 682
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 259 FLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 411
F KVDV+ A A+ + +PTF Y+ K+ + + +LE+ V +
Sbjct: 630 FFKVDVEESLALAKAESIKKIPTFKIYKKGEKVKEMVCPSHQLLEDSVTHF 680
>At2g42580.1 68415.m05269 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 691
Score = 33.1 bits (72), Expect = 0.23
Identities = 14/51 (27%), Positives = 26/51 (50%)
Frame = +1
Query: 259 FLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQY 411
F VDV+ A A+ + +PTF Y+N K+ + + LE+ ++ +
Sbjct: 639 FFMVDVEESMALAKAESIRKVPTFKMYKNGDKVKEMVCPSHQFLEDSIKHF 689
>At1g21750.2 68414.m02723 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 487
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 149 NAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
N+G K V+++F A WC CQ++AP +++ +
Sbjct: 390 NSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSY 421
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQ 232
+VV+F A WC C+++AP +E+
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEK 71
>At1g21750.1 68414.m02722 protein disulfide isomerase, putative
similar to SP|P29828 Protein disulfide isomerase
precursor (PDI) (EC 5.3.4.1) {Medicago sativa}; isoform
contains non-consensus GA donor splice site at intron 9
Length = 501
Score = 32.7 bits (71), Expect = 0.31
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 149 NAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKF 247
N+G K V+++F A WC CQ++AP +++ +
Sbjct: 390 NSG-KNVLLEFYAPWCGHCQKLAPILDEVAVSY 421
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQ 232
+VV+F A WC C+++AP +E+
Sbjct: 50 IVVEFYAPWCGHCKQLAPEYEK 71
>At1g04980.1 68414.m00497 thioredoxin family protein similar to
SP|Q63081 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Rattus norvegicus}; contains Pfam profile
PF00085: Thioredoxin
Length = 443
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 104 ATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
A+V N ++F E+ +L +V+F A WC C+++AP
Sbjct: 164 ASVELNSSNFD-ELVTESKELWIVEFFAPWCGHCKKLAP 201
Score = 31.5 bits (68), Expect = 0.71
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +2
Query: 125 AHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
++F++++ N+ +V+V+F A WC CQ + P +E++
Sbjct: 36 SNFKSKVLNSNG-VVLVEFFAPWCGHCQSLTPTWEKV 71
>At2g33270.1 68415.m04078 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 273
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 143 MANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPREYF 262
+ NAG KLVVVDF + C C+ + P ++ K P F
Sbjct: 108 LRNAGDKLVVVDFFSPSCGGCKALHPKICKIAEKNPEVEF 147
>At3g06730.1 68416.m00798 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin
Length = 183
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 167 VVVDFTATWCPPCQRIAPFFEQLPAKF 247
++VDF ATWC PC +A E L ++
Sbjct: 97 LIVDFYATWCGPCILMAQELEMLAVEY 123
>At5g40370.1 68418.m04897 glutaredoxin, putative similar to
glutaredoxin [Ricinus communis] SWISS-PROT:P55143
Length = 111
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 170 VVDFTATWCPPCQRIAPFFEQLPAKF 247
VV F+ T+CP C R+ +QL AKF
Sbjct: 15 VVVFSKTYCPYCVRVKELLQQLGAKF 40
>At1g60420.1 68414.m06802 DC1 domain-containing protein contains
Pfam domain PF03107: DC1 domain
Length = 578
Score = 31.5 bits (68), Expect = 0.71
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 110 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
+++ND Q ++ + K + + F+A WC PCQR P
Sbjct: 28 LVRNDGE-QVKVDSLLGKKIGLYFSAAWCGPCQRFTP 63
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 161 KLVVVDFTATWCPPCQRIAP 220
K +++ F+A WCPPC+ P
Sbjct: 364 KTILMYFSAHWCPPCRAFTP 383
>At1g08570.1 68414.m00950 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; similar to ESTs gb|T46281,
gb|R83933, gb|N65879, emb|F14466, gb|N96726,
gb|AA042340, and emb|Z18150
Length = 275
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 143 MANAGTKLVVVDFTATWCPPCQRIAP 220
+ NAG KLVVVDF + C C+ + P
Sbjct: 112 LTNAGDKLVVVDFFSPGCGGCKALHP 137
>At3g03860.1 68416.m00398 expressed protein
Length = 300
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 155 GTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPR 253
G + V F A+WCP + + P F+ L + FP+
Sbjct: 73 GNAYMSVLFYASWCPFSRAVRPKFDMLSSMFPQ 105
>At2g32920.1 68415.m04036 thioredoxin family protein similar to
SP|Q15084 Protein disulfide isomerase A6 precursor (EC
5.3.4.1) {Homo sapiens}; contains Pfam profile PF00085:
Thioredoxin
Length = 440
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/37 (29%), Positives = 26/37 (70%)
Frame = +2
Query: 125 AHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQL 235
++F++++ N+ +V+V+F A WC C+ + P +E++
Sbjct: 38 SNFKSKVLNSNG-VVLVEFFAPWCGHCKALTPTWEKV 73
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 104 ATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
A+V N ++F ++ +L +V+F A WC C+++AP
Sbjct: 163 ASVELNASNFD-DLVIESNELWIVEFFAPWCGHCKKLAP 200
>At4g37200.1 68417.m05266 thioredoxin family protein contains Pfam
profile: PF00085 Thioredoxin; identical to cDNA
thioredoxin-like protein (hcf164 gene) GI;12049652
Length = 261
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 140 EMANAGTKLVVVDFTATWCPPCQRIAP 220
E A + K VV+F A WC C+ +AP
Sbjct: 132 EEALSNGKPTVVEFYADWCEVCRELAP 158
>At1g35620.1 68414.m04425 thioredoxin family protein similar to
SP|Q43116 Protein disulfide isomerase precursor (PDI)
(EC 5.3.4.1) {Ricinus communis}; contains Pfam profile
PF00085: Thioredoxin
Length = 440
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = +1
Query: 256 VFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQYYGSDVAEE 435
V K++ D+ + A + A PT + Y + ++ +L ++++ DVA
Sbjct: 86 VIAKLNADKYSRLARKIEIDAFPTLMLYNHGVPMEYYGPRKADLLVRYLKKFVAPDVAVL 145
Query: 436 DEDNTV 453
+ D+TV
Sbjct: 146 ESDSTV 151
>At5g60640.2 68418.m07611 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 536
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 110 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
V+ + +F + N + V+V+F A WC CQ +AP
Sbjct: 106 VVIKERNFTDVIEN--NQYVLVEFYAPWCGHCQSLAP 140
>At5g60640.1 68418.m07610 thioredoxin family protein similar to
protein disulfide isomerase GI:5902592 from [Volvox
carteri f. nagariensis], GI:2708314 from Chlamydomonas
reinhardtii; contains Pfam profile: PF00085 Thioredoxin
Length = 597
Score = 28.7 bits (61), Expect = 5.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 110 VIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAP 220
V+ + +F + N + V+V+F A WC CQ +AP
Sbjct: 106 VVIKERNFTDVIEN--NQYVLVEFYAPWCGHCQSLAP 140
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,336,638
Number of Sequences: 28952
Number of extensions: 309797
Number of successful extensions: 992
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1902108000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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