Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0201
         (809 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    34   0.005
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   8.4  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 34.3 bits (75), Expect = 0.005
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +3

Query: 192 EYILVEFYAPWCGHCKSLAPETPRQQQSW 278
           + ++V+F+A WCG CK +AP+    Q  +
Sbjct: 21  QLVVVDFFATWCGPCKVIAPKLEEFQNKY 49



 Score = 29.1 bits (62), Expect = 0.17
 Identities = 12/52 (23%), Positives = 26/52 (50%)
 Frame = +2

Query: 296 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISWLKK 451
           I + KVD  + ++LA  Y +   PT  F +    +    G  A+ + +++++
Sbjct: 53  IVVVKVDVDECEELAAQYNIASMPTFLFIKRKEVVGQFSGANAEKLENFIQQ 104


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -2

Query: 235 QWPHHGA*NSTKMYSVVVITVSKLALLKTSTFS 137
           +W  HG   +TKM S VV   + + L+ TS  S
Sbjct: 275 EWDQHGNNFATKMTSNVVFLGAIVLLVITSRLS 307


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,681
Number of Sequences: 2352
Number of extensions: 14187
Number of successful extensions: 91
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)