Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0200
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    22   2.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.6  

>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 15/70 (21%), Positives = 31/70 (44%)
 Frame = +2

Query: 305 GDSYLSELIRIKIYGLNSNKESKHVQCVLKSIPKNVSRRLTFRSNEFFYNEISFYEKVLP 484
           G+ ++ +++      L +N   KH   +L S+ K   R    R+N+      S +   + 
Sbjct: 64  GEQWMQKVVSFHKLKLTNNISDKHGFTILNSMHKYQPRFHLVRANDILKLPYSTFRTYVF 123

Query: 485 ELSKFRASKA 514
           + ++F A  A
Sbjct: 124 KETEFIAVTA 133


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 326 LIRIKIYGLNSNKESKHVQCVLKSIPKNV 412
           L+ +  YG   N+ESK    +L  +P+ V
Sbjct: 332 LVSVCFYGSWINEESKLSLDLLSYVPREV 360


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,513
Number of Sequences: 336
Number of extensions: 1843
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)