Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0200
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0179 + 7500647-7500779,7503021-7503222,7503356-7503427,750...    30   0.96 
11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415     29   2.9  
03_06_0391 - 33577872-33578093,33578556-33579218                       28   5.1  
08_02_0919 - 22627147-22627326,22627646-22627726,22627827-226281...    27   6.8  
07_01_0767 + 5896982-5897572,5897664-5897861                           27   6.8  
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043...    27   8.9  
09_02_0600 - 11096646-11097047                                         27   8.9  

>02_02_0179 +
           7500647-7500779,7503021-7503222,7503356-7503427,
           7503655-7503726,7504212-7504283,7504711-7504782,
           7505045-7505116,7505209-7505280,7505688-7505759,
           7506215-7506292,7506670-7506729,7506810-7506848,
           7506949-7506998,7507110-7507480,7508467-7508662,
           7508856-7508936,7509694-7509848,7510302-7510512,
           7510648-7510882,7510995-7511145,7511813-7512181
          Length = 944

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 12/32 (37%), Positives = 22/32 (68%)
 Frame = +2

Query: 131 FLNIIQILFKAKQNGRRLQNVDRRVSSHHQRE 226
           +L+++    + KQ GR L+ VD+R+ SH+ +E
Sbjct: 816 YLHLLDWAERLKQEGRLLEIVDQRLGSHYSQE 847


>11_06_0131 - 20416257-20417635,20419525-20419905,20420703-20423415
          Length = 1490

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -3

Query: 310  ITLAGVADILPMGEGCFLTNHLVRDSF 230
            +TL  V DI PM E C+++ H  +DSF
Sbjct: 1154 LTLLPVCDI-PMNERCWVSKHRFKDSF 1179


>03_06_0391 - 33577872-33578093,33578556-33579218
          Length = 294

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 185 QNVDRRVSSHHQRETERISNQMVREETTFTHWE 283
           + V+ +VS+    E  +I+N+  REE     WE
Sbjct: 174 EEVETKVSAWQTAEVAKINNRFKREEVVINGWE 206


>08_02_0919 -
           22627147-22627326,22627646-22627726,22627827-22628103,
           22629451-22629755,22629835-22629987,22630318-22631076
          Length = 584

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = +2

Query: 164 KQNGRRLQNVDRRVSSHHQRETERISNQMVREETTFTHWEYVGDT 298
           +Q   +L  +++    HH R  + ++      E  F H EY+  T
Sbjct: 452 QQLEEQLLELEKEEEEHHMRRMQALNEMDQESENVFRHQEYIIST 496


>07_01_0767 + 5896982-5897572,5897664-5897861
          Length = 262

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = +2

Query: 185 QNVDRRVSSHHQRETERISNQMVREETTFTHWEYVGDTGKGDSYLSELIR 334
           + V+ +V++    E  +I+N+  REE     WE      K  ++L+++ R
Sbjct: 150 EEVEAKVAAWQAEEVAKINNKFKREEVVINGWE-SQQVDKATAWLAKIER 198


>10_07_0063 -
           12502305-12503361,12503567-12503668,12504251-12504378,
           12504653-12504764,12504876-12504927,12505260-12505517,
           12505943-12506079,12506296-12506606
          Length = 718

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +2

Query: 206 SSHHQRETERISNQMVREETTFTHWE 283
           S HHQ   +R ++Q +R      HWE
Sbjct: 606 SGHHQARVDRETHQPLRSRNQDYHWE 631


>09_02_0600 - 11096646-11097047
          Length = 133

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +2

Query: 305 GDSYLSELIRIKIYGLNSNKESKHVQCV-LKSIPKNVSR 418
           GD +  EL++  I   N N  S   QC  L S+P + SR
Sbjct: 49  GDGWAGELVQPLISHTNENMRSHRCQCKGLHSLPTSPSR 87


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,932,579
Number of Sequences: 37544
Number of extensions: 190735
Number of successful extensions: 500
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)