Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0200
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   5.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   10.0 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   10.0 
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   10.0 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   10.0 

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 311 SYLSELIRIKIYGLNSN 361
           +YLS   RI  Y +NSN
Sbjct: 445 AYLSRSERINYYNVNSN 461


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 292 RHRQG*FLPQRVDSHQNLRPEFKQRVEARPVRIKEHP 402
           RHR+     + V S  N       R  A+P  I + P
Sbjct: 243 RHREADDAEESVSSETNHNERSTPRSHAKPSLIDDEP 279


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 292 RHRQG*FLPQRVDSHQNLRPEFKQRVEARPVRIKEHP 402
           RHR+     + V S  N       R  A+P  I + P
Sbjct: 243 RHREADDAEESVSSETNHNERSTPRSHAKPSLIDDEP 279


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 239 RFVQSLVGDERRHA 198
           RF++SL   ER+HA
Sbjct: 95  RFIKSLEERERKHA 108


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +1

Query: 292 RHRQG*FLPQRVDSHQNLRPEFKQRVEARPVRIKEHP 402
           RHR+     + V S  N       R  A+P  I + P
Sbjct: 243 RHREADDAEESVSSETNHNERSTPRSHAKPSLIDDEP 279


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,390
Number of Sequences: 438
Number of extensions: 2213
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)