Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0199
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1489 + 26933029-26933077,26933704-26933838,26934354-269344... 36 0.039
06_02_0203 + 12986685-12988691 31 1.1
03_02_1016 + 13228113-13228964 30 1.5
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 30 1.5
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 2.0
04_04_0057 + 22410167-22411330 29 2.6
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424... 29 3.4
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 29 3.4
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 3.4
10_06_0110 + 10889414-10889669,10889756-10889806,10890595-108911... 29 4.5
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 28 6.0
11_01_0038 - 284152-284202,285014-285091,285215-285218,285669-28... 28 7.9
10_02_0150 - 5883942-5884328,5884573-5884677,5885219-5885311,588... 28 7.9
08_01_1029 - 10419090-10419476,10419721-10419822,10420367-104204... 28 7.9
06_02_0315 - 14230234-14232771 28 7.9
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 28 7.9
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 7.9
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 7.9
>07_03_1489 +
26933029-26933077,26933704-26933838,26934354-26934478,
26934558-26934626,26934730-26934798,26935095-26935157,
26935280-26936533
Length = 587
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 336 SPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQISERHRELRF 491
SPP P G + +D +E ++G KE A + E + + HR+L+F
Sbjct: 460 SPPYPDGNNWEEEEDEEEEEEEGDKEEEAEEEEEEEEEEEAEEDANHRDLKF 511
>06_02_0203 + 12986685-12988691
Length = 668
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 244 RYREFDSSQLKHTETQEKN---PLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 402
++++ D ++ T T + P+P+ + +AA++AH N G EH K + TTT
Sbjct: 483 KFKKADHAEPPATTTLDAEAAMPVPNSNAIAADEAHGNATAG-EHDKKETAEQTTT 537
>03_02_1016 + 13228113-13228964
Length = 283
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +3
Query: 264 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHD 398
E A AH +G + A+ +R C SG P P RS T HD
Sbjct: 214 EAARAHASNGGKHAAARR-CSSGNHQPVPRARSTTGMDSLGHGHD 257
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 30.3 bits (65), Expect = 1.5
Identities = 30/95 (31%), Positives = 37/95 (38%), Gaps = 8/95 (8%)
Frame = +3
Query: 81 TLPP*KTSPRSPQT*RVSSKASTP--------AVSVTSTPMKRLCFRLLKTSPLRRPRSL 236
TLPP + SP SP T SSK TP ++SV+ P L R + + P
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSSGSLSVSRAPASALASRRSHSGEIPLPSDG 90
Query: 237 YSTVSRV*FEPAEAHRDSGEEPASGQRCCRSGESP 341
SR HR +G P C S SP
Sbjct: 91 PPRGSR------PGHRRTGSGPLIFTSCSSSATSP 119
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 119 DLKSQLEGFNTSCLRDVDTNEKIVL 193
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>04_04_0057 + 22410167-22411330
Length = 387
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +3
Query: 267 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 446
P A + P RC S PP P + + D++ +D RKE RS
Sbjct: 187 PPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSE 246
Query: 447 EGKEQISERH 476
++ H
Sbjct: 247 RRAARLPRSH 256
>10_08_0849 +
21040043-21040199,21040620-21040678,21040925-21042494,
21042583-21042710,21042793-21043033,21043160-21043710
Length = 901
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 373 DKTQMKHTTTEEKNPLPPIEAIEAEKGKNKFLNGIENFDSTKLK 504
D Q+K + E+K+P E +K + F NGI+ S+K K
Sbjct: 419 DSHQLKDSVVEDKDPRHLTEGSLPDKAASNFKNGIKPSASSKQK 462
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 358 RPRGSGGLSPLRQHLCPEAGSSPESRCASAG 266
R RG+ G+ LR L P A +SP ++ A+ G
Sbjct: 54 RRRGAHGVRALRPLLLPRASASPSAKTAAGG 84
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 126 RVSSKASTPAVSVTSTPMKRLCFR 197
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>10_06_0110 +
10889414-10889669,10889756-10889806,10890595-10891163,
10891178-10891660,10891747-10891944,10893300-10893354,
10893372-10893631
Length = 623
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = +3
Query: 102 SPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPL----RRPRSLYSTVSRV*FEP 269
SP + SS P +++ + P R + PL R R + V+R+ EP
Sbjct: 10 SPEANTLSPTSSPLPLPPITIHAPPFTRALHHAASSFPLLSQHRSHRWKGAAVARIGIEP 69
Query: 270 AEAHRDSGEEPAS 308
A R EEP S
Sbjct: 70 AMGRRQQPEEPDS 82
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Frame = +3
Query: 273 EAHRDSGEEPASGQ--RCCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 446
E+ +SG+EP + SG + P P + D + DD ES+ D +
Sbjct: 328 ESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQT 387
Query: 447 EGKE 458
+ K+
Sbjct: 388 QAKK 391
>11_01_0038 -
284152-284202,285014-285091,285215-285218,285669-285769,
286642-287151,287550-288032,288668-289156
Length = 571
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = +3
Query: 378 DSDEAHDDGRKESTAPDRSYRSGEGKEQISERHRELRFH*AEAQGTC 518
D DE DD ++ S +P R +++ +R H E +G C
Sbjct: 32 DEDEEDDDDQEPSPSPSDEARLQSVLRRLTAEEVRIRVHDVEIRGCC 78
>10_02_0150 -
5883942-5884328,5884573-5884677,5885219-5885311,
5885394-5885606,5886976-5887005
Length = 275
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 313 KDVVAAEKA--HQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKGKNKFLNGIENF 486
KD + K+ ++N D + + + T E K+P P+EA+ K+ FL +
Sbjct: 129 KDTHCSSKSGFNENAKDAIAQME-AYVAQPTEEGKDPKTPVEAVAHVLPKSTFLRNV-GM 186
Query: 487 DSTKLK 504
ST++K
Sbjct: 187 QSTEMK 192
>08_01_1029 -
10419090-10419476,10419721-10419822,10420367-10420459,
10420542-10420754,10421625-10421654
Length = 274
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +1
Query: 313 KDVVAAEKA--HQNLLDGVEHFDKTQMKHTTTEEKNPLPPIEAIEAEKGKNKFLNGIENF 486
KD + K+ ++N D + + + T E K+P P+EA+ K+ FL +
Sbjct: 128 KDTHCSSKSGFNENAKDAIAQME-AYVAQPTEEGKDPKTPVEAVAHVLPKSTFLRNV-GM 185
Query: 487 DSTKLK 504
ST++K
Sbjct: 186 QSTEMK 191
>06_02_0315 - 14230234-14232771
Length = 845
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 375 QDSDEAHDDGRKESTAPDRSYRSGEGKEQISERHRELRFH*AEAQGTCEKXPXXHK 542
+++ E+HDDG++E+T D + Q+ E+ ++ EAQ E+ K
Sbjct: 629 EETLESHDDGKEEATL-DGQEEGTTQETQVDEKGEKVEVGGVEAQDVVEEQKQRRK 683
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +1
Query: 253 EFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEK 411
++D + ++ E QEK K + K ++ VE K +M HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 95 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 187
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 95 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 187
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,765,151
Number of Sequences: 37544
Number of extensions: 386306
Number of successful extensions: 1328
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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