Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0195
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.6  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   3.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.6  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.7  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 164 VPVPHDIPQAPGKPEENATAVQPTKQNTTSE 256
           VP P   P    + E    + QPT+ +TT +
Sbjct: 396 VPTPEPQPTQTTESEPTQASEQPTESSTTQK 426


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +2

Query: 167 PVPHDIPQAPGKPEENATAVQPTKQNTTS 253
           PVP  + +   KP        P++  TT+
Sbjct: 392 PVPQPVEEVTQKPSSTKAPAPPSRDLTTT 420


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 15 ANKSHLFNCLFLLKISF 65
          ANK++   CL LL I+F
Sbjct: 2  ANKTYWLCCLLLLGIAF 18


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin
          deacetylase 2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 15 ANKSHLFNCLFLLKISF 65
          ANK++   CL LL I+F
Sbjct: 2  ANKTYWLCCLLLLGIAF 18


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 114 CA*HCRLNSLEPNWELQYPFLMISLKLQVNLKKTQQQFSLRNKTQLLS 257
           C+ +CR+  +    ++  P  +  L+   N  K    FSLR    LL+
Sbjct: 278 CSEYCRVFKMLQEEDIFTPDRIPQLEEMSNFLKRHTGFSLRPAAGLLT 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,780
Number of Sequences: 336
Number of extensions: 2253
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)