Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0193
         (531 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   2.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   2.9  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   3.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   3.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   3.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.1  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    21   6.8  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.8  
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    21   6.8  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   6.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   6.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   6.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.9  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.9  

>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 413 DKQRTPRATHDNR 451
           D+ RTPR  HD R
Sbjct: 210 DESRTPRPKHDGR 222



 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 414 ISKGRHARHTITDYST 461
           I +  H RHT T ++T
Sbjct: 274 IQRRTHTRHTTTSHNT 289


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = +2

Query: 179 TGHIARNCPEGGR-------ESATQTCYNC 247
           +G +  NCP GG+       E+A + C +C
Sbjct: 19  SGCLITNCPRGGKRSKFAISENAVKPCVSC 48


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +3

Query: 174 TRRATSHGTVPR 209
           TRRA+S G +PR
Sbjct: 268 TRRASSRGIIPR 279


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 157 VMLQLQQDGP 186
           VMLQ+ QDGP
Sbjct: 964 VMLQISQDGP 973


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 157 VMLQLQQDGP 186
           VMLQ+ QDGP
Sbjct: 964 VMLQISQDGP 973


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 280 DGTKTCYVCGKPGHISREXDEXGTSRSHLVSLT 378
           DG+K      KPG    E     T R+  VS T
Sbjct: 422 DGSKPVQTTPKPGQWVPEKSTSTTQRTTTVSTT 454


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 271 CGRCGRLVAVIAGLRRRLPPPLGTVP 194
           C  C R    +A LRR L    G  P
Sbjct: 40  CEHCDRQFVQVANLRRHLRVHTGERP 65


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 346 GTSRSHLVSLTINYVYYDATHG 411
           GT R  L++    ++++D  HG
Sbjct: 3   GTQRYLLIATAALFLFFDLCHG 24


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +1

Query: 346 GTSRSHLVSLTINYVYYDATHG 411
           GT R  L++    ++++D  HG
Sbjct: 3   GTQRYLLIATAALFLFFDLCHG 24


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 125 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 229
           A E        SC   N +  ++ NC   GR + T
Sbjct: 227 ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 261


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 370 SLTINYVYYDATHGR 414
           ++  NY YY AT+ R
Sbjct: 59  AIDFNYYYYAATYAR 73


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 271 CGRCGRLVAVIAGLRRRLPPPLGTVP 194
           C  C R    +A LRR L    G  P
Sbjct: 193 CEHCDRQFVQVANLRRHLRVHTGERP 218


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 125 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 229
           A E        SC   N +  ++ NC   GR + T
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 50


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +2

Query: 125 ARECAQSPDEPSCYNCNKTGHIARNCPEGGRESAT 229
           A E        SC   N +  ++ NC   GR + T
Sbjct: 16  ALESPNPASRSSCLGSNTSSMLSLNCLNTGRTNFT 50


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -1

Query: 258 ADLLQL*QVCVADSRPPSGQFRA 190
           ADL+QL Q+ + D+R  S + RA
Sbjct: 113 ADLIQLEQIHLDDNRIESLERRA 135


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 201 VPRGGGSLRRRPAITATSR 257
           VP+GG     RP +  T R
Sbjct: 36  VPQGGRRRAARPGVVTTPR 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,958
Number of Sequences: 336
Number of extensions: 2542
Number of successful extensions: 17
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)