Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0192
         (437 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4E6Y8 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  
UniRef50_A7PIZ0 Cluster: Chromosome chr13 scaffold_17, whole gen...    31   8.1  

>UniRef50_A4E6Y8 Cluster: Putative uncharacterized protein; n=1;
           Collinsella aerofaciens ATCC 25986|Rep: Putative
           uncharacterized protein - Collinsella aerofaciens ATCC
           25986
          Length = 611

 Score = 31.5 bits (68), Expect = 8.1
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 284 G*RKRPHILNPGCFKSMPNVIGIGTKLFRGKMLSGLLPV 400
           G +KRP +L+  CF S+   IGI  + F GK  + L PV
Sbjct: 477 GTKKRPIMLHRVCFGSIERFIGILIEHFAGKFPTWLAPV 515


>UniRef50_A7PIZ0 Cluster: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
           chr13 scaffold_17, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 1316

 Score = 31.5 bits (68), Expect = 8.1
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 175 ETECPLFVEYERNGITRGNYCQN 243
           E ECPL V +ERNG+ R ++  N
Sbjct: 240 ENECPLIVFFERNGLERSSFSIN 262


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,061,427
Number of Sequences: 1657284
Number of extensions: 7667815
Number of successful extensions: 12739
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12739
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21918499148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)