Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0192
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   0.96 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   3.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   3.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.9  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    20   9.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    20   9.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    20   9.0  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 0.96
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 196 QIMGTPFPSRNPQSYVFRL 140
           Q+   P PS+   SY+FRL
Sbjct: 358 QVKRVPDPSKRKGSYIFRL 376


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 47  HCHQLYKVTIGL 12
           HCH L+ + IG+
Sbjct: 670 HCHFLFHIVIGM 681


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 47  HCHQLYKVTIGL 12
           HCH L+ + IG+
Sbjct: 670 HCHFLFHIVIGM 681


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 308 IYAAACVSLKDNLHLL 261
           IY   CVS+  N+HLL
Sbjct: 56  IYYFYCVSITFNVHLL 71


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 181 ECPLFVEYERNGITR 225
           E P+F++  RNG+ R
Sbjct: 472 ELPVFLQEHRNGMYR 486


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 181 ECPLFVEYERNGITR 225
           E P+F++  RNG+ R
Sbjct: 472 ELPVFLQEHRNGMYR 486


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 166 CGSETECPLFVEYERNGITRGNYCQN 243
           CG++ +  LFV++ R  +  G    N
Sbjct: 640 CGNKIDTSLFVDHIRQCVGGGTIGSN 665


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,169
Number of Sequences: 336
Number of extensions: 2000
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)